Clone BO10225 Report

Search the DGRC for BO10225

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:102
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG10263-RA
Protein status:BO10225.pep: Imported from assembly
Sequenced Size:940

Clone Sequence Records

BO10225.3prime Sequence

934 bp (804 high quality bases) assembled on 2006-04-19

> BO10225.3prime
ATGGTCTAGAATGCTTGCGGAGCCATAGCTACCACTCGCCTTGCGCTGCT
TGTGCAACTCCAGGCCCAGACCGACGCCGCCCAGATCCGTCATTTTTGGC
TGCTCCGCCATGGCTGACAGCTGCGGCTGTGGCTGCAACGGTGGCGGCTG
CGGCGCCACATGTCTGTGATTGATGTGCGCCTGCAGGTCGCGTTGCGAAA
GGTATGTTCTACGGCAGCCGGAGCTGCCGTAGCGACTGCCGCCGTGCGTG
CACATGAACACGGTGCCCAGGCCACTCTGCTCCACGCGCAACACCTTGTC
CGTGCAGCGGGGACAACTCTTGATGGGCTCGGCGCGGGCGCACTTGAGGC
AAAATACATGCTTGCAGGGTATCATGCGGCCGTAGACGAGGATCGGCTTG
TCGCACTGATCGCAGCAGTGGATCATCGGGTTCAGCACCTTCTCGCCGAT
CAGGCTCACCTTGTGGTTCCACTTAAGGCGCAGCATCGGCTCCGGCGGTC
CGCGCGAAAGCGTGGTGAAAGTGGGCGCCTCCAGTTGCGATATGTCCGCC
TCCATGTCGATTGTTTGGCTCATCACGGGCGGTGGCACTTGCTGCAGGAC
CTGTGGCTGTTGCGTCGCTGGAGTCATGTTCCCGCTGGCGGCGACCGCTC
CTAGCGCACCGTGCGGCAGGGGCTCCTCCAGAGCGCCGGGCGTTTCCAGT
TCGCCGTCCTTGTCGAGCTCCTGCATGACCGAATCTTCGGAGGCGTCCAG
TCTTCCCGGACTGTCCTCCAGGGCTGCACAGCTGCTGGCCGCCAGGGCTG
CGGCGTCGGCGATGCTGCTGTCGTCGATTTTCTTGCCACGACCGCGTCCT
CGGCCACGTCCGCGCCCGCGAGCCCTGGTGCCACGCCCTCGTCCGCGGGC
GCGCTTCACTTCCTCGGTGTCCATGTCAACTGAT

BO10225.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10263-PA 909 CG10263-RA 1..906 924..19 4505 99.8 Minus
CG10263-PD 1359 CG10263-RD 1..849 924..76 4220 99.8 Minus
CG10263-PC 936 CG10263-RC 392..933 560..19 2710 100 Minus
CG10263-PC 936 CG10263-RC 1..364 924..561 1795 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:05:32
Subject Length Description Subject Range Query Range Score Percent Strand
Hakai-RA 1733 CG10263-RA 105..1010 924..19 4515 99.9 Minus
Hakai-RE 1663 CG10263-RE 105..989 924..40 4410 99.9 Minus
Hakai-RC 1760 CG10263-RC 496..1037 560..19 2710 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19581335..19581876 19..560 2710 100 Plus
2L 23513712 2L 19582007..19582370 561..924 1805 99.7 Plus
Blast to na_te.dros performed on 2015-02-12 04:05:31 has no hits.

BO10225.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:33:27 Download gff for BO10225.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10263-PA 1..909 15..924 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:45:06 Download gff for BO10225.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10263-PA 1..909 15..924 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:21:49 Download gff for BO10225.3prime
Subject Subject Range Query Range Percent Splice Strand
Hakai-RA 94..1013 15..934 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:08:43 Download gff for BO10225.3prime
Subject Subject Range Query Range Percent Splice Strand
Hakai-RA 94..1013 15..934 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:08:43 Download gff for BO10225.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19581331..19581876 15..560 99 <- Plus
2L 19582007..19582379 561..934 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:21:49 Download gff for BO10225.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19581331..19581876 15..560 99 <- Plus
arm_2L 19582007..19582379 561..934 98   Plus

BO10225.5prime Sequence

884 bp (838 high quality bases) assembled on 2006-04-19

> BO10225.5prime
GAAGTTATCAGTCGACATGGACACCGAGGAAGTGAAGCGCGGCCGCGGAC
GAGGGCGTGGCACCAGGGCTCGCGGGCGCGGACGTGGCCGAGGACGCGGT
CGTGGCAAGAAAATCGACGACAGCAGCATCGCCGACGCCGCAGCCCTGGC
GGCCAGCAGCTGTGCAGCCCTGGAGGACAGTCCGGGAAGACTGGACGCCT
CCGAAGATTCGGTCATGCAGGAGCTCGACAAGGACGGCGAACTGGAAACG
CCCGGCGCTCTGGAGGAGCCCCTGCCGCACGGTGCGCTAGGAGCGGTCGC
CGCCAGCGGGAACATGACTCCAGCGACGCAACAGCCACAGGTCCTGCAGC
AAGTGCCACCGCCCGTGATGAGCCAAACAATCGACATGGAGGCGGACATA
TCGCAACTGGAGGCGCCCACTTTCACCACGCTTTCGCGCGGACCGCCGGA
GCCGATGCTGCGCCTTAAGTGGAACCACAAGGTGAGCCTGATCGGCGAGA
AGGTGCTGAACCCGATGATCCACTGCTGCGATCAGTGCGACAAGCCGATC
CTCGTCTACGGCCGCATGATACCCTGCAAGCATGTATTTTGCCTCAAGTG
CGCCCGCGCCGAGCCCATCAAGAGTTGTCCCCGCTGCACGGACAAGGTGT
TGCGCGTGGAGCAGAGTGGCCTGGGCACCGTGTTCATGTGCACGCACGGC
GGCAGTCGCTACGGCAGCTCCGGCTGCCGTAGAACATACCTTTCGCAACG
CGACCTGCAGGCGCACATCAATCACAGACATGTGGCGCCGCAGCCGCCAC
CGTTGCAGCCACAGCCGCAGCTGTCAGCCATGGCGGAGCAGCCAAAAATG
ACGGATCTGGGCGGCGTCGGTCTGGGCCTGGAGT

BO10225.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:58:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10263-PA 909 CG10263-RA 1..868 17..884 4340 100 Plus
CG10263-PD 1359 CG10263-RD 1..849 17..865 4245 100 Plus
CG10263-PC 936 CG10263-RC 392..895 381..884 2520 100 Plus
CG10263-PC 936 CG10263-RC 1..364 17..380 1820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
Hakai-RE 1663 CG10263-RE 105..972 17..884 4340 100 Plus
Hakai-RA 1733 CG10263-RA 105..972 17..884 4340 100 Plus
Hakai-RF 1690 CG10263-RF 496..999 381..884 2520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19581373..19581876 884..381 2520 100 Minus
2L 23513712 2L 19582007..19582370 380..17 1820 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:07:53 has no hits.

BO10225.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:33:28 Download gff for BO10225.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10263-PA 1..868 17..884 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:45:07 Download gff for BO10225.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10263-PA 1..868 17..884 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:28:19 Download gff for BO10225.5prime
Subject Subject Range Query Range Percent Splice Strand
Hakai-RA 93..972 6..884 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:24:53 Download gff for BO10225.5prime
Subject Subject Range Query Range Percent Splice Strand
Hakai-RA 93..972 6..884 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:24:53 Download gff for BO10225.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19581373..19581876 381..884 100 <- Minus
2L 19582007..19582382 6..380 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:28:19 Download gff for BO10225.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19581373..19581876 381..884 100 <- Minus
arm_2L 19582007..19582382 6..380 98   Minus

BO10225.complete Sequence

940 bp assembled on 2008-08-15

> BO10225.complete
GAAGTTATCAGTCGACATGGACACCGAGGAAGTGAAGCGCGGCCGCGGAC
GAGGGCGTGGCACCAGGGCTCGCGGGCGCGGACGTGGCCGAGGACGCGGT
CGTGGCAAGAAAATCGACGACAGCAGCATCGCCGACGCCGCAGCCCTGGC
GGCCAGCAGCTGTGCAGCCCTGGAGGACAGTCCGGGAAGACTGGACGCCT
CCGAAGATTCGGTCATGCAGGAGCTCGACAAGGACGGCGAACTGGAAACG
CCCGGCGCTCTGGAGGAGCCCCTGCCGCACGGTGCGCTAGGAGCGGTCGC
CGCCAGCGGGAACATGACTCCAGCGACGCAACAGCCACAGGTCCTGCAGC
AAGTGCCACCGCCCGTGATGAGCCAAACAATCGACATGGAGGCGGACATA
TCGCAACTGGAGGCGCCCACTTTCACCACGCTTTCGCGCGGACCGCCGGA
GCCGATGCTGCGCCTTAAGTGGAACCACAAGGTGAGCCTGATCGGCGAGA
AGGTGCTGAACCCGATGATCCACTGCTGCGATCAGTGCGACAAGCCGATC
CTCGTCTACGGCCGCATGATACCCTGCAAGCATGTATTTTGCCTCAAGTG
CGCCCGCGCCGAGCCCATCAAGAGTTGTCCCCGCTGCACGGACAAGGTGT
TGCGCGTGGAGCAGAGTGGCCTGGGCACCGTGTTCATGTGCACGCACGGC
GGCAGTCGCTACGGCAGCTCCGGCTGCCGTAGAACATACCTTTCGCAACG
CGACCTGCAGGCGCACATCAATCACAGACATGTGGCGCCGCAGCCGCCAC
CGTTGCAGCCACAGCCGCAGCTGTCAGCCATGGCGGAGCAGCCAAAAATG
ACGGATCTGGGCGGCGTCGGTCTGGGCCTGGAGTTGCACAAGCAGCGCAA
GGCGAGTGGTAGCTATGGCTCCGCAAGCATTCTAGACCAT

BO10225.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
Hakai-RA 909 CG10263-PA 1..906 17..922 4530 100 Plus
Hakai-RE 1395 CG10263-PE 1..885 17..901 4425 100 Plus
Hakai-RC 936 CG10263-PC 392..933 381..922 2710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
Hakai-RA 1733 CG10263-RA 105..1010 17..922 4530 100 Plus
Hakai-RE 1663 CG10263-RE 105..989 17..901 4425 100 Plus
Hakai-RC 1760 CG10263-RC 496..1037 381..922 2710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19581335..19581876 922..381 2710 100 Minus
2L 23513712 2L 19582007..19582370 380..17 1820 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:16:18 has no hits.

BO10225.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:45:32 Download gff for BO10225.complete
Subject Subject Range Query Range Percent Splice Strand
CG10263-RA 116..1036 6..926 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:28:23 Download gff for BO10225.complete
Subject Subject Range Query Range Percent Splice Strand
Hakai-RA 105..1010 17..924 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:57:08 Download gff for BO10225.complete
Subject Subject Range Query Range Percent Splice Strand
CG10263-RA 128..1033 17..924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:14:34 Download gff for BO10225.complete
Subject Subject Range Query Range Percent Splice Strand
Hakai-RA 105..1010 17..924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:14:34 Download gff for BO10225.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19581333..19581876 381..924 99 <- Minus
2L 19582007..19582370 17..380 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:28:23 Download gff for BO10225.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19581333..19581876 381..924 99 <- Minus
arm_2L 19582007..19582370 17..380 100   Minus

BO10225.pep Sequence

Translation from 16 to 940

> BO10225.pep
MDTEEVKRGRGRGRGTRARGRGRGRGRGRGKKIDDSSIADAAALAASSCA
ALEDSPGRLDASEDSVMQELDKDGELETPGALEEPLPHGALGAVAASGNM
TPATQQPQVLQQVPPPVMSQTIDMEADISQLEAPTFTTLSRGPPEPMLRL
KWNHKVSLIGEKVLNPMIHCCDQCDKPILVYGRMIPCKHVFCLKCARAEP
IKSCPRCTDKVLRVEQSGLGTVFMCTHGGSRYGSSGCRRTYLSQRDLQAH
INHRHVAPQPPPLQPQPQLSAMAEQPKMTDLGGVGLGLELHKQRKASGSY
GSASILDH

BO10225.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
Hakai-PA 302 CG10263-PA 1..302 1..302 1600 100 Plus
Hakai-PC 311 CG10263-PC 1..311 1..302 1579 96.8 Plus
Hakai-PE 464 CG10263-PE 1..299 1..299 1570 99.3 Plus
Hakai-PF 473 CG10263-PF 1..308 1..299 1549 96.1 Plus