Clone Sequence Records
BO10243.5prime Sequence
428 bp (427 high quality bases) assembled on 2006-04-19
> BO10243.5prime
GAAGTTATCAGTCGACATGCCGCGTAATCCCTGGAAAACCAAACCGAAAC
ACACACAGGACATGCGGAATCTCAAGTGGGTTGGGAAGGGGGGTGGTGGT
ACAAATTTTTTACGCTTTTTTATTCCATCTGGAGATTTGCACTTGAGCGA
AAGGCGGGCGACAAAAACAGCAACGACGACACTTTGGTTACGCTCCAGCG
TAACACTTAACCGCTCTGAATGTGAATGTTCGTTTTTTTTTCTTTTTTGC
GGCCCGGTTGGGTGGATTATTCAGCGGCAATCCGCCGAGCCACTTGCCGC
ACCTCCACTTGCCACTTGCCACTTGCCCCATCATGGTTGTGACTTGAACT
GGAATTTGAAACAACAGCCGGCGCATGTAAAAATGTTTTGCAAAATGCCC
AAGAGATGCACAGCAAGCTTTCTAGACC
BO10243.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:59:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30282-PA | 399 | CG30282-RA | 1..396 | 17..412 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 13:50:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:50:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21489433..21489828 | 412..17 | 1980 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 13:50:03 has no hits.
BO10243.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:33:58 Download gff for
BO10243.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30282-PA | 1..399 | 17..416 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:45:50 Download gff for
BO10243.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30282-PA | 1..399 | 17..416 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 17:48:42 Download gff for
BO10243.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21489429..21489835 | 11..416 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 17:48:42 Download gff for
BO10243.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21489429..21489835 | 11..416 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:37:36 Download gff for
BO10243.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17376934..17377340 | 11..416 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 12:37:36 Download gff for
BO10243.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17376934..17377340 | 11..416 | 98 | | Minus |
BO10243.3prime Sequence
428 bp (427 high quality bases) assembled on 2006-04-19
> BO10243.3prime
ATGGTCTAGAAAGCTTGCTGTGCATCTCTTGGGCATTTTGCAAAACATTT
TTACATGCGCCGGCTGTTGTTTCAAATTCCAGTTCAAGTCACAACCATGA
TGGGGCAAGTGGCAAGTGGCAAGTGGAGGTGCGGCAAGTGGCTCGGCGGA
TTGCCGCTGAATAATCCACCCAACCGGGCCGCAAAAAAGAAAAAAAAACG
AACATTCACATTCAGAGCGGTTAAGTGTTACGCTGGAGCGTAACCAAAGT
GTCGTCGTTGCTGTTTTTGTCGCCCGCCTTTCGCTCAAGTGCAAATCTCC
AGATGGAATAAAAAAGCGTAAAAAATTTGTACCACCACCCCCCTTCCCAA
CCCACTTGAGATTCCGCATGTCCTGTGTGTGTTTCGGTTTGGTTTTCCAG
GGATTACGCGGCATGTCGACTGATAACT
BO10243.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:59:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30282-PA | 399 | CG30282-RA | 1..396 | 414..19 | 1980 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 15:53:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:53:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21489433..21489828 | 19..414 | 1980 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:53:48 has no hits.
BO10243.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:33:57 Download gff for
BO10243.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30282-PA | 1..399 | 15..414 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:45:48 Download gff for
BO10243.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30282-PA | 1..399 | 15..414 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:19 Download gff for
BO10243.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21489429..21489835 | 15..420 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:19 Download gff for
BO10243.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21489429..21489835 | 15..420 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 14:59:22 Download gff for
BO10243.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17376934..17377340 | 15..420 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 14:59:22 Download gff for
BO10243.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17376934..17377340 | 15..420 | 98 | | Plus |
BO10243.complete Sequence
430 bp (430 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ631691
> BO10243.complete
GAAGTTATCAGTCGACATGCCGCGTAATCCCTGGAAAACCAAACCGAAAC
ACACACAGGACATGCGGAATCTCAAGTGGGTTGGGAAGGGGGGTGGTGGT
ACAAATTTTTTACGCTTTTTTATTCCATCTGGAGATTTGCACTTGAGCGA
AAGGCGGGCGACAAAAACAGCAACGACGACACTTTGGTTACGCTCCAGCG
TAACACTTAACCGCTCTGAATGTGAATGTTCGTTTTTTTTTCTTTTTTGC
GGCCCGGTTGGGTGGATTATTCAGCGGCAATCCGCCGAGCCACTTGCCGC
ACCTCCACTTGCCACTTGCCACTTGCCCCATCATGGTTGTGACTTGAACT
GGAATTTGAAACAACAGCCGGCGCATGTAAAAATGTTTTGCAAAATGCCC
AAGAGATGCACAGCAAGCTTTCTAGACCAT
BO10243.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 15:30:36 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 15:30:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:30:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21489433..21489828 | 412..17 | 1980 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:30:36 has no hits.
BO10243.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:07:37 Download gff for
BO10243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
H-RA | 138..159 | 159..180 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 14:07:37 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:35 Download gff for
BO10243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21489431..21489828 | 17..414 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:09:35 Download gff for
BO10243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21489431..21489828 | 17..414 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:45 Download gff for
BO10243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17376936..17377333 | 17..414 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:45 Download gff for
BO10243.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17376936..17377333 | 17..414 | 99 | | Minus |
BO10243.pep Sequence
Translation from 16 to 430
> BO10243.pep
MPRNPWKTKPKHTQDMRNLKWVGKGGGGTNFLRFFIPSGDLHLSERRATK
TATTTLWLRSSVTLNRSECECSFFFLFCGPVGWIIQRQSAEPLAAPPLAT
CHLPHHGCDLNWNLKQQPAHVKMFCKMPKRCTASFLDH
Sequence BO10243.pep has no blast hits.