Clone Sequence Records
BO10268.3prime Sequence
801 bp (744 high quality bases) assembled on 2006-04-19
> BO10268.3prime
ATGGTCTAGATAGCTTGCCTTTTTAACAGCTCCCATCCGACTGGCGTCCT
GACTTGGATACGGTACTTGACCCGGTGGCGGAGGAATCGATATGGAATCC
AAATTGACACCCGAGGAAGAAAGGGCTGTGGAAGTGGCGTTTCCGTAGGG
AGCTGCATAAGTAGGCTGACCATACATTTGGTAAGCCGACGCCGGAACTA
GATTTGATGGCAACTGATGCAGCTTCATGCCGGCGGGCATGACATTGATT
TGCTCTTGGCGAAGATTGAAGTAGTCGTTGGGCTTCGCGCTAGGCGGTGG
AATGCCGGCCAAGTCGAAGCGTCTGTCTGTCTTTGCAGCGGTGCCCTGCT
TTGCCTGAGAGTGAGCCCACTTAATGCTCACCTTCCGGCCCTGGATCACC
AGTTTATTAAAGGTCCGCTCAGCAGCCAGCTCGGCAGCGTTTCTTTTGGT
GTATTGCACAAAAGCGCACTGCTGGCGTGGCACCAGCGCAATTGATCGAA
TTTCGCCGAACTGGTAGAACTGATCTCGCAGCTCGGGTTCCGTGATTTCT
TCAGGAAGGTTCCCCACATAGAGAGTTGTGATGTTGCGGTCCTCCGGCGG
CTCGAGTGTGGGAAGCGAGGCTGCACGCTTCATGATCTTCTCGGCCACAG
GATCGTTGCGTCCGTAGTACCTGTCCTTGATGTTTTGCTCACATAGCGGA
TCGTCCGGCTCGTTGGGCTTGTCGTGGCGGTATGGGCACTCCTCTCCACG
CTTGCACTCGCCCTTAACCCAAAAGGAGCAGATGTGCGGCCGATTTCTTT
T
BO10268.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:59:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-PA | 1257 | CG14641-RA | 472..1254 | 801..19 | 3915 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:57:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-RA | 1564 | CG14641-RA | 572..1354 | 801..19 | 3915 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4230989..4231771 | 19..801 | 3915 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:56:58 has no hits.
BO10268.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:34:47 Download gff for
BO10268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-PA | 472..1257 | 18..801 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:46:54 Download gff for
BO10268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-PA | 472..1257 | 18..801 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 14:12:26 Download gff for
BO10268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 572..1354 | 19..801 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:34:39 Download gff for
BO10268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 572..1354 | 19..801 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:34:39 Download gff for
BO10268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4230989..4231771 | 19..801 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 14:12:26 Download gff for
BO10268.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 56711..57493 | 19..801 | 100 | | Plus |
BO10268.5prime Sequence
828 bp (737 high quality bases) assembled on 2006-04-19
> BO10268.5prime
GAAGTTATCAGTCGACATGTCTATGTCAAAAACGACTAACACCTATAACC
GGCAGAACTGGGAAGATGCTGAATTCCCAATTCTGTGCCAAACTTGCCTT
GGCGACAATCCGTACGTGCGGATGATTAAAGAGCGGTTCGGCAAGGAATG
CAAGATATGCACGCGTCCATTCACAATATTTCGATGGTGTCCTGGTGCTC
GTATGCGCTTCAAAAAGACGGAGATATGTCAAACGTGTGCGCGCCTGAAG
AACGTGTGTCAGACCTGCCTCTTGGACCTGGAGTACGGACTGCCGATTCA
AGTACGAGATGCGGCGCTCAAAGTGGCTGACAATATGCCACAAAGCGACG
TTAACAAGGAATACTACATCCAAAACATAGACGCCCAGCTGCAGGACGGA
GATGGCACGGAGGCGGCAGGAGCTGTCGGTCGATCCCTCGCCGCCAACGA
GATGTTGTCCAAGCTTGCGCGCACAGCACCCTATTACAAAAGAAATCGGC
CGCACATCTGCTCCTTTTGGGTTAAGGGCGAGTGCAAGCGTGGAGAGGAG
TGCCCATACCGCCACGACAAGCCCAACGAGCCGGACGATCCGCTATGTGA
GCAAAACATCAAGGACAGGTACTACGGACGCAACGATCCTGTGGCCGAGA
AGATCATGAAGCGTGCAGCCTCGCTTCCCACACTCGAGCCGCCGGAGGAC
CGCAACATCACAACTCTCTATGTGGGGAACCTTCCTGAAGAAATCACGGA
ACCCGAGCTGCGAGATCAGTTCTACCAGTTCGGCGAAATTCGATCAATTG
CGCTGGTGCCACGCCAGCAGTGCGCTTT
BO10268.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-PA | 1257 | CG14641-RA | 1..812 | 17..828 | 4060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-RA | 1564 | CG14641-RA | 101..912 | 17..828 | 4060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:06:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4231431..4232242 | 828..17 | 4060 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:06:46 has no hits.
BO10268.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:34:48 Download gff for
BO10268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-PA | 1..812 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:46:56 Download gff for
BO10268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-PA | 1..812 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:28:11 Download gff for
BO10268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..912 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:22:47 Download gff for
BO10268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..912 | 17..828 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:22:47 Download gff for
BO10268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4231431..4232242 | 17..828 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:28:11 Download gff for
BO10268.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 57153..57964 | 17..828 | 100 | | Minus |
BO10268.complete Sequence
1288 bp assembled on 2008-08-15
> BO10268.complete
GAAGTTATCAGTCGACATGTCTATGTCAAAAACGACTAACACCTATAACC
GGCAGAACTGGGAAGATGCTGAATTCCCAATTCTGTGCCAAACTTGCCTT
GGCGACAATCCGTACGTGCGGATGATTAAAGAGCGGTTCGGCAAGGAATG
CAAGATATGCACGCGTCCATTCACAATATTTCGATGGTGTCCTGGTGCTC
GTATGCGCTTCAAAAAGACGGAGATATGTCAAACGTGTGCGCGCCTGAAG
AACGTGTGTCAGACCTGCCTCTTGGACCTGGAGTACGGACTGCCGATTCA
AGTACGAGATGCGGCGCTCAAAGTGGCTGACAATATGCCACAAAGCGACG
TTAACAAGGAATACTACATCCAAAACATAGACGCCCAGCTGCAGGACGGA
GATGGCACGGAGGCGGCAGGAGCTGTCGGTCGATCCCTCGCCGCCAACGA
GATGTTGTCCAAGCTTGCGCGCACAGCACCCTATTACAAAAGAAATCGGC
CGCACATCTGCTCCTTTTGGGTTAAGGGCGAGTGCAAGCGTGGAGAGGAG
TGCCCATACCGCCACGACAAGCCCAACGAGCCGGACGATCCGCTATGTGA
GCAAAACATCAAGGACAGGTACTACGGACGCAACGATCCTGTGGCCGAGA
AGATCATGAAGCGTGCAGCCTCGCTTCCCACACTCGAGCCGCCGGAGGAC
CGCAACATCACAACTCTCTATGTGGGGAACCTTCCTGAAGAAATCACGGA
ACCCGAGCTGCGAGATCAGTTCTACCAGTTCGGCGAAATTCGATCAATTG
CGCTGGTGCCACGCCAGCAGTGCGCTTTTGTGCAATACACCAAAAGAAAC
GCTGCCGAGCTGGCTGCTGAGCGGACCTTTAATAAACTGGTGATCCAGGG
CCGGAAGGTGAGCATTAAGTGGGCTCACTCTCAGGCAAAGCAGGGCACCG
CTGCAAAGACAGACAGACGCTTCGACTTGGCCGGCATTCCACCGCCTAGC
GCGAAGCCCAACGACTACTTCAATCTTCGCCAAGAGCAAATCAATGTCAT
GCCCGCCGGCATGAAGCTGCATCAGTTGCCATCAAATCTAGTTCCGGCGT
CGGCTTACCAAATGTATGGTCAGCCTACTTATGCAGCTCCCTACGGAAAC
GCCACTTCCACAGCCCTTTCTTCCTCGGGTGTCAATTTGGATTCCATATC
GATTCCTCCGCCACCGGGTCAAGTACCGTATCCAAGTCAGGACGCCAGTC
GGATGGGAGCTGTTAAAAAGGCAAGCTATCTAGACCAT
BO10268.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:38:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-RA | 1257 | CG14641-PA | 1..1254 | 17..1270 | 6270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:38:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-RA | 1564 | CG14641-RA | 101..1354 | 17..1270 | 6270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4230989..4232242 | 1270..17 | 6270 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:38:42 has no hits.
BO10268.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:48:20 Download gff for
BO10268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 114..1367 | 17..1270 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:17 Download gff for
BO10268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..1354 | 17..1272 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:04:42 Download gff for
BO10268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 114..1367 | 17..1272 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:49:46 Download gff for
BO10268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..1354 | 17..1272 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:49:46 Download gff for
BO10268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4230987..4232242 | 17..1272 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:17 Download gff for
BO10268.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 56709..57964 | 17..1272 | 99 | | Minus |
BO10268.pep Sequence
Translation from 16 to 1288
> BO10268.pep
MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTR
PFTIFRWCPGARMRFKKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAA
LKVADNMPQSDVNKEYYIQNIDAQLQDGDGTEAAGAVGRSLAANEMLSKL
ARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPNEPDDPLCEQNIKD
RYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLPEEITEPELRD
QFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSI
KWAHSQAKQGTAAKTDRRFDLAGIPPPSAKPNDYFNLRQEQINVMPAGMK
LHQLPSNLVPASAYQMYGQPTYAAPYGNATSTALSSSGVNLDSISIPPPP
GQVPYPSQDASRMGAVKKASYLDH
BO10268.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:29:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-PA | 418 | CG14641-PA | 1..418 | 1..418 | 2240 | 100 | Plus |
