Clone Sequence Records
BO10326.3prime Sequence
826 bp (825 high quality bases) assembled on 2006-04-19
> BO10326.3prime
ATGGTCTAGAAAGCTTGCCGAGGAGTTTGGACAGCGCTCGTAGATTTGGA
TGTAGGACTCGGTGAGCGTGATCATCTGCGGCAGTATCTCGGTGACATGC
AGATCCTGCATCTCGTACCACTGACCGTTGGCCTTGTGCAGGATGTGGGC
ACGATAGGTGCCCTTCTTGGGATCGCCGTCGTGCACAATATTGGCCACCA
GATTGTATTTCGTATCCTTGACATCCTTGTCGCGCTGCCGCATGCCCAGA
ATGTCGCCAAAGTCCACGTGCTTGATGGGAAAGTTCACAATGGTGGGATT
CTTTTCCAGGAAGAATGTGTTCTTGGTAAATCGCTTGATGTACAGAATGA
TGAACTGCGGCAGGCGGGTGATCTCGAAGCGCTTCATAAAGTTAGCCTTG
TAGGTCTTGTACTCCTTTTCGGCAGTGCCATTGAACTTGCTCAGCAGCTG
ATATAAGTTCACCTGCGGTATGATGTTCTCGCGAAACTCGTCGGTGAACA
GCGGCGGCGGAGGTAGATCGCATGTGAGGTAGATGAAATTTTTGTCCTCC
ACCTGGTCCTTGTACTCCTCGGTGGCCAGCAGTTGCGCCTTGGCAGCGTC
GTCCAACTCGACGGGCGGCATCTTGCGCGTGTAGATCTTCATCTCGCCCA
GAAATATCTTGTAGAGTATAGAAGAATTCGGATGTTTGTTGCCCTTGAGG
GCGCGGTGCAGTGTATTGAGGAACCAGGACAGAAAGTCAATGGGATCGCC
TTGCTCGGTGATCTGGAAACGCTTGCTGGACCAAAGCACCACAGCTTGCA
GCATCTCGTGTGGCGAAACGTGCGAC
BO10326.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:01:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-PA | 1485 | CG7288-RA | 675..1482 | 826..19 | 4040 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:48:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-RA | 1695 | CG7288-RA | 767..1574 | 826..19 | 4040 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:48:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18859087..18859642 | 826..271 | 2780 | 100 | Minus |
X | 23542271 | X | 18859695..18859951 | 275..19 | 1270 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-10 19:48:47 has no hits.
BO10326.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:36:27 Download gff for
BO10326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-PA | 675..1485 | 16..826 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:49:14 Download gff for
BO10326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-PA | 675..1485 | 16..826 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:34:02 Download gff for
BO10326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 767..1574 | 19..826 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:29:20 Download gff for
BO10326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 767..1574 | 19..826 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:29:20 Download gff for
BO10326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18859087..18859641 | 272..826 | 100 | -> | Minus |
X | 18859699..18859951 | 19..271 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:34:02 Download gff for
BO10326.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18753120..18753674 | 272..826 | 100 | -> | Minus |
arm_X | 18753732..18753984 | 19..271 | 100 | | Minus |
BO10326.5prime Sequence
817 bp (816 high quality bases) assembled on 2006-04-19
> BO10326.5prime
GAAGTTATCAGTCGACATGGCGCAAACGCAAGCTCCAGCCGCCAAGCGCA
TGAAGCTGGAGAAGACGCCGGCAAATCCCGTCGAAGAGGATGAGACGCCC
TCCGTGTTCAATCCGAAGTACAGGGTGTGTCCCTACTTGGACACCATCAA
CCGTAACCTGCTGGATTTCGATTTCGAGAAGCTTTGCTCCATTTCGCTGA
CGAGGATCAATGTTTATGCCTGCCTGGTGTGCGGCAAGTACTTCCAGGGA
CGTGGCACCAACACCCACGCCTACACACATTCCGTGGGCGAGGCTCATCA
CGTGTTCCTCAATCTGCACACGCTGCGATTCTACTGCCTGCCGGATAATT
ACGAGATCATCGACTCCTCGTTGGACGATATCAAATACGTGCTAAATCCA
ACGTTCACACGCCAGGAGATCAGCAAGTTGGATCAGTTACAGCCGAAGCA
TTCGCGAACCGTGGACGGTGTTCTGTACTTACCCGGCGTCGTGGGTTTGA
ACAACATCAAAGCGAACGACTACTGCAATGTGGTGCTGCATGCACTCTCC
CACGTCGGTCCACTTAGGGACTACTTCCTGCAAAAGCAAAGCTATGCGCA
TGTCGTGCGGCCACCTGGAGATTCCGTGTTCACGCTGGTGCAACGTTTCG
GCGAGCTAATGCGCAAGATGTGGAATCCGCGGAACTTTAAGTCGCACGTT
TCGCCACACGAGATGCTGCAAGCTGTGGTGCTTTGGTCCAGCAAGCGTTT
CCAGATCACCGAGCAAGGCGATCCCATTGACTTTCTGTCCTGGTTCCTCA
ATACACTGCACCGCGCC
BO10326.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-PA | 1485 | CG7288-RA | 1..801 | 17..817 | 4005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:33:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-RA | 1695 | CG7288-RA | 93..893 | 17..817 | 4005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:33:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18858488..18859213 | 92..817 | 3630 | 100 | Plus |
X | 23542271 | X | 18858377..18858432 | 37..92 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 14:33:20 has no hits.
BO10326.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:36:28 Download gff for
BO10326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-PA | 1..801 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:49:15 Download gff for
BO10326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-PA | 1..801 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:41:34 Download gff for
BO10326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 93..893 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:01:50 Download gff for
BO10326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 93..893 | 17..817 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:01:50 Download gff for
BO10326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18858295..18858316 | 17..38 | 100 | -> | Plus |
X | 18858379..18858432 | 39..92 | 100 | -> | Plus |
X | 18858489..18859213 | 93..817 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:41:34 Download gff for
BO10326.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18752328..18752349 | 17..38 | 100 | -> | Plus |
arm_X | 18752412..18752465 | 39..92 | 100 | -> | Plus |
arm_X | 18752522..18753246 | 93..817 | 100 | | Plus |
BO10326.complete Sequence
1516 bp (1516 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ631708
> BO10326.complete
GAAGTTATCAGTCGACATGGCGCAAACGCAAGCTCCAGCCGCCAAGCGCA
TGAAGCTGGAGAAGACGCCGGCAAATCCCGTCGAAGAGGATGAGACGCCC
TCCGTGTTCAATCCGAAGTACAGGGTGTGTCCCTACTTGGACACCATCAA
CCGTAACCTGCTGGATTTCGATTTCGAGAAGCTTTGCTCCATTTCGCTGA
CGAGGATCAATGTTTATGCCTGCCTGGTGTGCGGCAAGTACTTCCAGGGA
CGTGGCACCAACACCCACGCCTACACACATTCCGTGGGCGAGGCTCATCA
CGTGTTCCTCAATCTGCACACGCTGCGATTCTACTGCCTGCCGGATAATT
ACGAGATCATCGACTCCTCGTTGGACGATATCAAATACGTGCTAAATCCA
ACGTTCACACGCCAGGAGATCAGCAAGTTGGATCAGTTACAGCCGAAGCA
TTCGCGAACCGTGGACGGTGTTCTGTACTTACCCGGCGTCGTGGGTTTGA
ACAACATCAAAGCGAACGACTACTGCAATGTGGTGCTGCATGCACTCTCC
CACGTCGGTCCACTTAGGGACTACTTCCTGCAAAAGCAAAGCTATGCGCA
TGTCGTGCGGCCACCTGGAGATTCCGTGTTCACGCTGGTGCAACGTTTCG
GCGAGCTAATGCGCAAGATGTGGAATCCGCGGAACTTTAAGTCGCACGTT
TCGCCACACGAGATGCTGCAAGCTGTGGTGCTTTGGTCCAGCAAGCGTTT
CCAGATCACCGAGCAAGGCGATCCCATTGACTTTCTGTCCTGGTTCCTCA
ATACACTGCACCGCGCCCTCAAGGGCAACAAACATCCGAATTCTTCTATA
CTCTACAAGATATTTCTGGGCGAGATGAAGATCTACACGCGCAAGATGCC
GCCCGTCGAGTTGGACGACGCTGCCAAGGCGCAACTGCTGGCCACCGAGG
AGTACAAGGACCAGGTGGAGGACAAAAATTTCATCTACCTCACATGCGAT
CTACCTCCGCCGCCGCTGTTCACCGACGAGTTTCGCGAGAACATCATACC
GCAGGTGAACTTATATCAGCTGCTGAGCAAGTTCAATGGCACTGCCGAAA
AGGAGTACAAGACCTACAAGGCTAACTTTATGAAGCGCTTCGAGATCACC
CGCCTGCCGCAGTTCATCATTCTGTACATCAAGCGATTTACCAAGAACAC
ATTCTTCCTGGAAAAGAATCCCACCATTGTGAACTTTCCCATCAAGCACG
TGGACTTTGGCGACATTCTGGGCATGCGGCAGCGCGACAAGGATGTCAAG
GATACGAAATACAATCTGGTGGCCAATATTGTGCACGACGGCGATCCCAA
GAAGGGCACCTATCGTGCCCACATCCTGCACAAGGCCAACGGTCAGTGGT
ACGAGATGCAGGATCTGCATGTCACCGAGATACTGCCGCAGATGATCACG
CTCACCGAGTCCTACATCCAAATCTACGAGCGCTGTCCAAACTCCTCGGC
AAGCTTTCTAGACCAT
BO10326.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:59:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-RA | 1485 | CG7288-PA | 1..1482 | 17..1498 | 7410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:59:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-RA | 1695 | CG7288-RA | 93..1574 | 17..1498 | 7410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:59:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18858488..18859642 | 92..1246 | 5775 | 100 | Plus |
X | 23542271 | X | 18859695..18859951 | 1242..1498 | 1270 | 99.6 | Plus |
X | 23542271 | X | 18858377..18858432 | 37..92 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:59:43 has no hits.
BO10326.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:50:17 Download gff for
BO10326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 1..1485 | 17..1501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:22:01 Download gff for
BO10326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 80..1561 | 17..1498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:35:58 Download gff for
BO10326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 93..1574 | 17..1500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:50:17 Download gff for
BO10326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 80..1561 | 17..1498 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:41:58 Download gff for
BO10326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7288-RA | 93..1574 | 17..1500 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:41:58 Download gff for
BO10326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18858295..18858316 | 17..38 | 100 | -> | Plus |
X | 18858379..18858432 | 39..92 | 100 | -> | Plus |
X | 18858489..18859641 | 93..1245 | 100 | -> | Plus |
X | 18859699..18859951 | 1246..1500 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:35:58 Download gff for
BO10326.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18752328..18752349 | 17..38 | 100 | -> | Plus |
arm_X | 18752412..18752465 | 39..92 | 100 | -> | Plus |
arm_X | 18752522..18753674 | 93..1245 | 100 | -> | Plus |
arm_X | 18753732..18753984 | 1246..1500 | 99 | | Plus |
BO10326.pep Sequence
Translation from 16 to 1516
> BO10326.pep
MAQTQAPAAKRMKLEKTPANPVEEDETPSVFNPKYRVCPYLDTINRNLLD
FDFEKLCSISLTRINVYACLVCGKYFQGRGTNTHAYTHSVGEAHHVFLNL
HTLRFYCLPDNYEIIDSSLDDIKYVLNPTFTRQEISKLDQLQPKHSRTVD
GVLYLPGVVGLNNIKANDYCNVVLHALSHVGPLRDYFLQKQSYAHVVRPP
GDSVFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQAVVLWSSKRFQITEQ
GDPIDFLSWFLNTLHRALKGNKHPNSSILYKIFLGEMKIYTRKMPPVELD
DAAKAQLLATEEYKDQVEDKNFIYLTCDLPPPPLFTDEFRENIIPQVNLY
QLLSKFNGTAEKEYKTYKANFMKRFEITRLPQFIILYIKRFTKNTFFLEK
NPTIVNFPIKHVDFGDILGMRQRDKDVKDTKYNLVANIVHDGDPKKGTYR
AHILHKANGQWYEMQDLHVTEILPQMITLTESYIQIYERCPNSSASFLDH
BO10326.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:29:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7288-PA | 494 | CG7288-PA | 1..494 | 1..494 | 2641 | 100 | Plus |
Ubpy-PB | 367 | CG5798-PB | 32..361 | 157..491 | 180 | 22 | Plus |
Ubpy-PA | 896 | CG5798-PA | 561..890 | 157..491 | 180 | 22 | Plus |