Clone Sequence Records
BO10423.3prime Sequence
902 bp (804 high quality bases) assembled on 2006-04-19
> BO10423.3prime
ATGGTCTAGAAAGCTTGCATCGTATCCCTGTGGAGTGGGAAGGCCATAAA
AGCTTACATTATTGATATCGTAGAGCTGTTTCAGATACTTAAGAACTTCA
TCTGTTCTCCACTCCGAGTCATTTGACCGGCAAGTGGGGCAATTCTCCGC
GCTGGGGAACTGAATCTTCGGGAACTTGGGATCCTCCGTAGAGTCTCCAG
CAATGCGTGCATTGACTTCGTTGTGGGCTGCCCACAGCCAGAGGATCTCC
TCGTCATGGGTTTTCACCGAAGTCAGATTACGACGAATGGCCATCTGCTG
AAAGTGTTCAGAGCAATCCGTGCAGCCGAAGAAGTACTTGGCGAATCCAT
GAAAGGTTTTCAGTATTGAGCCCGCCTCAAAGTAATTTGGTGGCTTAGCT
GCCTCCACGGTCAAATGGTGAAACAGTGTCCACATAGAGCAGGTAAAGCT
TCGCAGTAATGGCCGCGATCCAATGCAGCCAACGTATCGCCTTGCCTTAA
ACACCCTTCGACCATTTTCAAGCGAATCAACCAAATCACCAAAGTCGGCT
CCCTTTATACTCTGCTTCGAGCTCAACGAGTTGTCCAGGTCAGTCAGCAA
TAGCTTTCCGTCCTTGTTCAATGGATTCAGGTATCGGAAAATCTTAATAA
TATTTTTAAGAGCATTCAGGCTATTACCCTCCAAAAGGACCCATTTACGA
AGCTCAATGTGCAGCAGTTTATCGATTGCCTGCTCCAAGTCGGCACGATA
GACCTGCAGTGGTGGCGTAAGCACTTTAGTTAGTATCGCTTGATTTTGGT
GATCCAGAAACTCAGTAAAGTTTGGGGCTACAGCGATGGGTAGTGGTGGA
TCTGGCTGAATATTGCGGTTCTTAAGGAAGTCTCCAATAGTGCTGGCATA
CG
BO10423.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-PA | 1659 | CG17843-RA | 773..1656 | 902..19 | 4420 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-RA | 1800 | CG17843-RA | 815..1698 | 902..19 | 4420 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:13:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21914561..21915444 | 902..19 | 4420 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 02:13:54 has no hits.
BO10423.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:39:23 Download gff for
BO10423.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-PA | 773..1659 | 18..902 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:53:15 Download gff for
BO10423.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-PA | 773..1659 | 18..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:44:24 Download gff for
BO10423.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 815..1702 | 13..902 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:19:21 Download gff for
BO10423.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 815..1702 | 13..902 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:19:21 Download gff for
BO10423.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21914561..21915448 | 13..902 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:44:24 Download gff for
BO10423.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17740283..17741170 | 13..902 | 99 | | Minus |
BO10423.5prime Sequence
925 bp (817 high quality bases) assembled on 2006-04-19
> BO10423.5prime
GAAGTTATCAGTCGACATGATTCGGCTACTCAAGACGCTTCTTTATTGCC
TGCTCCTCATCTCCCCTGCTGATGTGCTGGGCCGGCTTAATGCCAGAAAG
TCGGCGAACGAGGCGAGTCTCTATAGCGATACAGACAATGTGATTATGTT
GGACATCGAATCGCTGAGGCCAGCTCTAAACTTGAAGAACAGCAAGCTGG
TTCAGTTCCTCAACAGCTTCTGCGGTGACTGTCATCGCTTCGCACCGGTC
TTCAAGACCCTTTCCCGCGACCTCTACAAGTGGCGAAGAATTCTCCGGAT
CTATGCCGTAGATTGTGCCCAGGAGAGAAATGCTCAACTCTGCAGGGAAT
TCAATATCCGCCAGACGCCATCATTGCGATTCTTTGGTCCCGACATGAGG
AAGAACGATGATGTTCTTGGAGCGGTAATCCCAGGCCAAGATCCCGAGTT
CATTAGCTCAACACTGGCCGAATTGGTATCCCAAAATGACTATGGACCCG
GCCAGCCAAACTTTCGTCCCCTAAAAGCAACAGACTATGAAATTTTCCAA
GATCAAGATGGGGAAACTCCGATACAATTTGTGGCTCTTGTCCTTCAGCC
AAAAAATTCAAAGATCGGCAGGGACACGCTGCTAGAACTGCTGCCATTCA
AAGAGCTATCGGTGAGGATAATCGAAGATTCTCAGATATTTAACGAATTT
GGACTGGGTCCCGACGACCAAAAACTGGCTATAGTTGATAGAAATGGAAC
CGCCCAGTATCTTACACCATCTTCGGACTCCAGTGAAGCGTATGCCAGCA
CTATTGGAGACTTCCTTAAGAACCGGCATATTCAGCCAGATCCACCACTA
CCCATCGCTGTAGCCCCAAACTTTACTGAGTTTCTGGATCACCAAAATCA
AGCGATACTAACTAAAGTGCTTACG
BO10423.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:03:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-PA | 1659 | CG17843-RA | 1..909 | 17..925 | 4470 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:56:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-RA | 1800 | CG17843-RA | 43..951 | 17..925 | 4500 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21913789..21914697 | 17..925 | 4500 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:56:30 has no hits.
BO10423.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:39:25 Download gff for
BO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-PA | 1..909 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:53:17 Download gff for
BO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-PA | 1..909 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:17:39 Download gff for
BO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 37..951 | 11..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:32:55 Download gff for
BO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 37..951 | 11..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 04:32:55 Download gff for
BO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21913783..21914697 | 11..925 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:17:39 Download gff for
BO10423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17739505..17740419 | 11..925 | 99 | | Plus |
BO10423.complete Sequence
1690 bp (1690 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631747
> BO10423.complete
GAAGTTATCAGTCGACATGATTCGGCTACTCAAGACGCTTCTTTATTGCC
TGCTCCTCATCTCCCCTGCTGATGTGCTGGGCCGGCTTAATGCCAGAAAG
TCGGCGAACGAGGCGAGTCTCTATAGCGATACAGACAATGTGATTATGTT
GGACATCGAATCGCTGAGGCCAGCTCTAAACTTGAAGAACAGCAAGCTGG
TTCAGTTCCTCAACAGCTTCTGCGGTGACTGTCATCGCTTCGCACCGGTC
TTCAAGACCCTTTCCCGCGACCTCTACAAGTGGCGAAGAATTCTCCGGAT
CTATGCCGTAGATTGTGCCCAGGAGAGAAATGCTCAACTCTGCAGGGAAT
TCAATATCCGCCAGACGCCATCATTGCGATTCTTTGGTCCCGACATGAGG
AAGAACGATGATGTTCTTGGAGCGGTAATCCCAGGCCAAGATCCCGAGTT
CATTAGCTCAACACTGGCCGAATTGGTATCCCAAAATGACTATGGACCCG
GCCAGCCAAACTTTCGTCCCCTAAAAGCAACAGACTATGAAATTTTCCAA
GATCAAGATGGGGAAACTCCGATACAATTTGTGGCTCTTGTCCTTCAGCC
AAAAAATTCAAAGATCGGCAGGGACACGCTGCTAGAACTGCTGCCATTCA
AAGAGCTATCGGTGAGGATAATCGAAGATTCTCAGATATTTAACGAATTT
GGACTGGGTCCCGACGACCAAAAACTGGCTATAGTTGATAGAAATGGAAC
CGCCCAGTATCTTACACCATCTTCGGACTCCAGTGAAGCGTATGCCAGCA
CTATTGGAGACTTCCTTAAGAACCGCAATATTCAGCCAGATCCACCACTA
CCCATCGCTGTAGCCCCAAACTTTACTGAGTTTCTGGATCACCAAAATCA
AGCGATACTAACTAAAGTGCTTACGCCACCACTGCAGGTCTATCGTGCCG
ACTTGGAGCAGGCAATCGATAAACTGCTGCACATTGAGCTTCGTAAATGG
GTCCTTTTGGAGGGTAATAGCCTGAATGCTCTTAAAAATATTATTAAGAT
TTTCCGATACCTGAATCCATTGAACAAGGACGGAAAGCTATTGCTGACTG
ACCTGGACAACTCGTTGAGCTCGAAGCAGAGTATAAAGGGAGCCGACTTT
GGTGATTTGGTTGATTCGCTTGAAAATGGTCGAAGGGTGTTTAAGGCAAG
GCGATACGTTGGCTGCATTGGATCGCGGCCATTACTGCGAAGCTTTACCT
GCTCTATGTGGACACTGTTTCACCATTTGACCGTGGAGGCAGCTAAGCCA
CCAAATTACTTTGAGGCGGGCTCAATACTGAAAACCTTTCATGGATTCGC
CAAGTACTTCTTCGGCTGCACGGATTGCTCTGAACACTTTCAGCAGATGG
CCATTCGTCGTAATCTGACTTCGGTGAAAACCCATGACGAGGAGATCCTC
TGGCTGTGGGCAGCCCACAACGAAGTCAATGCACGCATTGCTGGAGACTC
TACGGAGGATCCCAAGTTCCCGAAGATTCAGTTCCCCAGCGCGGAGAATT
GCCCCACTTGCCGGTCAAATGACTCGGAGTGGAGAACAGATGAAGTTCTT
AAGTATCTGAAACAGCTCTACGATATCAATAATGTAAGCTTTTATGGCCT
TCCCACTCCACAGGGATACGATGCAAGCTTTCTAGACCAT
BO10423.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:41:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-RA | 1659 | CG17843-PA | 1..1656 | 17..1672 | 8265 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:42:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-RA | 1800 | CG17843-RA | 43..1698 | 17..1672 | 8265 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21913789..21915444 | 17..1672 | 8265 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:41:58 has no hits.
BO10423.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:57:50 Download gff for
BO10423.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 1..1659 | 17..1673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:15:18 Download gff for
BO10423.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 35..1700 | 11..1678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:01:19 Download gff for
BO10423.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 43..1698 | 17..1674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:57:51 Download gff for
BO10423.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 35..1700 | 11..1678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:24:54 Download gff for
BO10423.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17843-RA | 43..1698 | 17..1674 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:24:54 Download gff for
BO10423.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21913789..21915444 | 17..1674 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:01:19 Download gff for
BO10423.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17739511..17741166 | 17..1674 | 99 | | Plus |
BO10423.pep Sequence
Translation from 16 to 1690
> BO10423.pep
MIRLLKTLLYCLLLISPADVLGRLNARKSANEASLYSDTDNVIMLDIESL
RPALNLKNSKLVQFLNSFCGDCHRFAPVFKTLSRDLYKWRRILRIYAVDC
AQERNAQLCREFNIRQTPSLRFFGPDMRKNDDVLGAVIPGQDPEFISSTL
AELVSQNDYGPGQPNFRPLKATDYEIFQDQDGETPIQFVALVLQPKNSKI
GRDTLLELLPFKELSVRIIEDSQIFNEFGLGPDDQKLAIVDRNGTAQYLT
PSSDSSEAYASTIGDFLKNRNIQPDPPLPIAVAPNFTEFLDHQNQAILTK
VLTPPLQVYRADLEQAIDKLLHIELRKWVLLEGNSLNALKNIIKIFRYLN
PLNKDGKLLLTDLDNSLSSKQSIKGADFGDLVDSLENGRRVFKARRYVGC
IGSRPLLRSFTCSMWTLFHHLTVEAAKPPNYFEAGSILKTFHGFAKYFFG
CTDCSEHFQQMAIRRNLTSVKTHDEEILWLWAAHNEVNARIAGDSTEDPK
FPKIQFPSAENCPTCRSNDSEWRTDEVLKYLKQLYDINNVSFYGLPTPQG
YDASFLDH
BO10423.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:32:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17843-PA | 552 | CG17843-PA | 1..552 | 1..552 | 2896 | 100 | Plus |
| CG6690-PA | 562 | CG6690-PA | 10..540 | 9..541 | 995 | 39.8 | Plus |
| CG31413-PA | 561 | CG31413-PA | 11..553 | 7..545 | 970 | 37.9 | Plus |
| CG4670-PB | 637 | CG4670-PB | 44..570 | 35..545 | 865 | 35.8 | Plus |
| CG4670-PA | 637 | CG4670-PA | 44..570 | 35..545 | 865 | 35.8 | Plus |
