Clone BO10432 Report

Search the DGRC for BO10432

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:104
Well:32
Vector:pDNR-Dual
Associated Gene/Transcriptswa-RA
Protein status:BO10432.pep: validated full length
Sequenced Size:1678

Clone Sequence Records

BO10432.3prime Sequence

973 bp (850 high quality bases) assembled on 2006-04-19

> BO10432.3prime
ATGGTCTAGAAAGCTTGCGCGCTGGTTCCTTTGGTCAACGAACTCCTCCT
CGGGCATCGCAGGCAAACCATCCTTGTATGTGACATTGCTGCGGTTCAAT
GGATCACCATTACGGCAGCGAACGCAGGGCCCCAGGAATCGTAGCATCCG
ACTGCCCAGTGTCGTCCTTTTACTCCTAAAGTGGTCATGCGCCTCCAAAT
GCGACATCGACATCGAGTGGACCAGCAGACGCGTCTGACTATCGTTGATG
CTCTGATTATGAATGGTGTCATGGCTCTGATTGCGCCCCTGACTGATATT
GAAGCCCATCACCTCGATGACTCGGTTGTTGCGCTTGTCAAAGTAGTACA
TGCCCTCATGCTGGCCCCATTGCCTGGGCGAGATGAGCTCCCCCTGTTGT
TCCCACTGCCGCCTGGAGCTGGGTCGCTCCTCCTCGTGCGCCTCCACCTC
GATGGCCGAGTCGTTGCTGCTCGGCTGGCTGGTTTCCGAGTTGTTGGGCG
CCGGGGTTCTTCTGACCAAGGCCCTGGATGAGGTTTCCACACGATGTTCG
CCACTACCGCTGCCATCAGCTTCGGTGCTAACGCTGCTAAAGTCCAAAGA
TTGTGGATGAATCGCGCGTTGGACCTGGACGGGATTCTGGGCCACTCGGG
CAGAAGGCGCCACACTGAGCAGTGCCAACTCGATGGATCCTTTGCTGCTG
TTGTAGGTCAGGTCGCCCAGGGGATGGGGTGTGACCAGGACGTTTCCGGA
GGCGGGTATGGTGTCCACCAGGAAATCCGTTTGAGTGGCCTTGGCACTGG
TCGCCGATCGAATGTGGTACATGAAGTGGTGCTGTGAGTTGTCCTGCTGG
CGCCTAAGCTTCTGCTGGCATTCGCTTAGCTCGGTGCGCAGGGTCTCGAA
AATGCACTTCATCTTCACAAAATCATCTGTCTTTCTGTCCAGTCGTTCCT
GGACATACTCGTTGAAGCCCTGC

BO10432.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG3429-PA 1647 swa-RA 690..1644 973..19 4750 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
swa-RA 2022 CG3429-RA 802..1756 973..19 4760 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:17:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6363684..6364217 19..552 2670 100 Plus
X 23542271 X 6364304..6364726 551..973 2100 99.8 Plus
X 23542271 X 6362196..6362451 707..971 735 86 Plus
X 23542271 X 6361800..6361974 203..384 590 89.6 Plus
X 23542271 X 6362088..6362196 551..659 365 89 Plus
X 23542271 X 6361752..6361799 19..66 240 100 Plus
X 23542271 X 6361979..6362036 495..552 200 89.7 Plus
Blast to na_te.dros performed on 2015-02-12 13:17:08 has no hits.

BO10432.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:39:42 Download gff for BO10432.3prime
Subject Subject Range Query Range Percent Splice Strand
swa-PA 690..1647 18..973 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:53:39 Download gff for BO10432.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3429-PA 690..1647 18..973 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:58:51 Download gff for BO10432.3prime
Subject Subject Range Query Range Percent Splice Strand
swa-RA 802..1756 19..973 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:44:59 Download gff for BO10432.3prime
Subject Subject Range Query Range Percent Splice Strand
swa-RA 802..1756 19..973 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 16:44:59 Download gff for BO10432.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6363684..6364216 19..551 100 <- Plus
X 6364305..6364726 552..973 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:58:51 Download gff for BO10432.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6257717..6258249 19..551 100 <- Plus
arm_X 6258338..6258759 552..973 99   Plus

BO10432.5prime Sequence

859 bp (791 high quality bases) assembled on 2006-04-19

> BO10432.5prime
GAAGTTATCAGTCGACATGAGTCTACAGGACGAGAGTTTTCCGACGGACG
AGCTGTTTGACCAGCTGAACAATTTGAGTAGCAGTGGCGCCAGGAATACC
TGGTTCGCGGAGCACCATAAGCCCGCAGTCTTCGAGCGGGATACAGCGCC
ATTTTTGGAGATCTGCTACGCGGATCCAGACTTTGATGCGGATGGGGATG
TGGCCAACAAGAGCGCCAAGACATGCGTAAGCGATCCCGTGGGTCGTGAT
CAGGAGGATGAGGACGACTATGATGAGGATGTCGATGGCGATGATCATAA
ACTGGGTTGCGAGAAGGCTCCATTGGGCAGCGGGCGCTCCAGCAAGGCGG
TCTCTTACCAGGACATCCATTCGGCCTACACGAAGCGCCGCTTCCAGCAC
GTGACCAGCAAGGTGGGCCAGTACATAGCGGAGATCCAGGCGCAGGACCA
AAAGAGACGCAATGTGAAGTTCGCCGGATTCCAGCGAGTGAACTCTATGC
CGGAGAGTCTAACGCCCACATTGCAGCAGGTGTATGTCCATGATGGTGAC
TTCAAGGTGGACAAAAACTGCCAGACTCACTCCAACTCCGATTCGAATTA
CAATTCCAATTCAAACAACTCTAGCAGCAGCTTTGATCGATTGCTGGCCG
AGAACGAGAGCCTGCAGCAAAAGATCAACTCATTGAGAGTAGAAGCGAAG
CGTCTGCAGGGCTTCAACGAGTATGTCCAGGAACGACTGGACAGAAAGAC
AGATGATTTTGTGAAGATGAAGTGCAATTTCGAGACCCTGCGCACCGAGC
TAAGCGAATGCCAGCAGAAGCTTAGGCGCCAGCAGGACAACTCACAGCAC
CACTTCATG

BO10432.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG3429-PA 1647 swa-RA 1..843 17..859 4215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:06:00
Subject Length Description Subject Range Query Range Score Percent Strand
swa-RA 2022 CG3429-RA 113..955 17..859 4215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6364573..6365145 859..287 2865 100 Minus
X 23542271 X 6365325..6365596 288..17 1360 100 Minus
X 23542271 X 6362300..6362662 859..497 1230 89.3 Minus
X 23542271 X 6362667..6362833 456..290 625 91.6 Minus
X 23542271 X 6363110..6363242 288..150 525 93.5 Minus
Blast to na_te.dros performed on 2015-02-12 11:05:58 has no hits.

BO10432.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:39:43 Download gff for BO10432.5prime
Subject Subject Range Query Range Percent Splice Strand
swa-PA 1..843 17..859 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:53:41 Download gff for BO10432.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3429-PA 1..843 17..859 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:12:28 Download gff for BO10432.5prime
Subject Subject Range Query Range Percent Splice Strand
swa-RA 109..955 10..859 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:33:16 Download gff for BO10432.5prime
Subject Subject Range Query Range Percent Splice Strand
swa-RA 109..955 10..859 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:33:16 Download gff for BO10432.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6365326..6365600 10..287 98   Minus
X 6364573..6365144 288..859 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:12:28 Download gff for BO10432.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6258606..6259177 288..859 100 <- Minus
arm_X 6259359..6259633 10..287 98   Minus

BO10432.complete Sequence

1678 bp (1678 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631752

> BO10432.complete
GAAGTTATCAGTCGACATGAGTCTACAGGACGAGAGTTTTCCGACGGACG
AGCTGTTTGACCAGCTGAACAATTTGAGTAGCAGTGGCGCCAGGAATACC
TGGTTCGCGGAGCACCATAAGCCCGCAGTCTTCGAGCGGGATACAGCGCC
ATTTTTGGAGATCTGCTACGCGGATCCAGACTTTGATGCGGATGGGGATG
TGGCCAACAAGAGCGCCAAGACATGCGTAAGCGATCCCGTGGGTCGTGAT
CAGGAGGATGAGGACGACTATGATGAGGATGTCGATGGCGATGATCATAA
ACTGGGTTGCGAGAAGGCTCCATTGGGCAGCGGGCGCTCCAGCAAGGCGG
TCTCTTACCAGGACATCCATTCGGCCTACACGAAGCGCCGCTTCCAGCAC
GTGACCAGCAAGGTGGGCCAGTACATAGCGGAGATCCAGGCGCAGGACCA
AAAGAGACGCAATGTGAAGTTCGCCGGATTCCAGCGAGTGAACTCTATGC
CGGAGAGTCTAACGCCCACATTGCAGCAGGTGTATGTCCATGATGGTGAC
TTCAAGGTGGACAAAAACTGCCAGACTCACTCCAACTCCGATTCGAATTA
CAATTCCAATTCAAACAACTCTAGCAGCAGCTTTGATCGATTGCTGGCCG
AGAACGAGAGCCTGCAGCAAAAGATCAACTCATTGAGAGTAGAAGCGAAG
CGTCTGCAGGGCTTCAACGAGTATGTCCAGGAACGACTGGACAGAAAGAC
AGATGATTTTGTGAAGATGAAGTGCAATTTCGAGACCCTGCGCACCGAGC
TAAGCGAATGCCAGCAGAAGCTTAGGCGCCAGCAGGACAACTCACAGCAC
CACTTCATGTACCACATTCGATCGGCGACCAGTGCCAAGGCCACTCAAAC
GGATTTCCTGGTGGACACCATACCCGCCTCCGGAAACGTCCTGGTCACAC
CCCATCCCCTGGGCGACCTGACCTACAACAGCAGCAAAGGATCCATCGAG
TTGGCACTGCTCAGTGTGGCGCCTTCTGCCCGAGTGGCCCAGAATCCCGT
CCAGGTCCAACGCGCGATTCATCCACAATCTTTGGACTTTAGCAGCGTTA
GCACCGAAGCTGATGGCAGCGGTAGTGGCGAACATCGTGTGGAAACCTCA
TCCAGGGCCTTGGTCAGAAGAACCCCGGCGCCCAACAACTCGGAAACCAG
CCAGCCGAGCAGCAACGACTCGGCCATCGAGGTGGAGGCGCACGAGGAGG
AGCGACCCAGCTCCAGGCGGCAGTGGGAACAACAGGGGGAGCTCATCTCG
CCCAGGCAATGGGGCCAGCATGAGGGCATGTACTACTTTGACAAGCGCAA
CAACCGAGTCATCGAGGTGATGGGCTTCAATATCAGTCAGGGGCGCAATC
AGAGCCATGACACCATTCATAATCAGAGCATCAACGATAGTCAGACGCGT
CTGCTGGTCCACTCGATGTCGATGTCGCATTTGGAGGCGCATGACCACTT
TAGGAGTAAAAGGACGACACTGGGCAGTCGGATGCTACGATTCCTGGGGC
CCTGCGTTCGCTGCCGTAATGGTGATCCATTGAACCGCAGCAATGTCACA
TACAAGGATGGTTTGCCTGCGATGCCCGAGGAGGAGTTCGTTGACCAAAG
GAACCAGCGCGCAAGCTTTCTAGACCAT

BO10432.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
swa-RA 1647 CG3429-PA 1..1644 17..1660 8220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:12:12
Subject Length Description Subject Range Query Range Score Percent Strand
swa-RA 2022 CG3429-RA 113..1756 17..1660 8220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6364304..6365145 1128..287 4210 100 Minus
X 23542271 X 6363684..6364217 1660..1127 2670 100 Minus
X 23542271 X 6362196..6362662 972..497 1520 88.4 Minus
X 23542271 X 6365325..6365596 288..17 1360 100 Minus
X 23542271 X 6362667..6362833 456..290 625 91.6 Minus
X 23542271 X 6361800..6361974 1476..1295 590 89.6 Minus
X 23542271 X 6363110..6363242 288..150 525 93.5 Minus
X 23542271 X 6362088..6362196 1128..1020 365 89 Minus
X 23542271 X 6361752..6361799 1660..1613 240 100 Minus
X 23542271 X 6361979..6362036 1184..1127 200 89.7 Minus
Blast to na_te.dros performed on 2014-11-27 10:12:10 has no hits.

BO10432.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:48 Download gff for BO10432.complete
Subject Subject Range Query Range Percent Splice Strand
swa-RA 1..1647 17..1661 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:21:22 Download gff for BO10432.complete
Subject Subject Range Query Range Percent Splice Strand
swa-RA 110..1757 10..1660 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:53 Download gff for BO10432.complete
Subject Subject Range Query Range Percent Splice Strand
swa-RA 113..1756 17..1662 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:48 Download gff for BO10432.complete
Subject Subject Range Query Range Percent Splice Strand
swa-RA 110..1757 10..1660 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:15:36 Download gff for BO10432.complete
Subject Subject Range Query Range Percent Splice Strand
swa-RA 113..1756 17..1662 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:15:36 Download gff for BO10432.complete
Subject Subject Range Query Range Percent Splice Strand
X 6363682..6364216 1128..1662 99 <- Minus
X 6364305..6365144 288..1127 100 <- Minus
X 6365326..6365596 17..287 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:53 Download gff for BO10432.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6257715..6258249 1128..1662 99 <- Minus
arm_X 6258338..6259177 288..1127 100 <- Minus
arm_X 6259359..6259629 17..287 100   Minus

BO10432.pep Sequence

Translation from 16 to 1678

> BO10432.pep
MSLQDESFPTDELFDQLNNLSSSGARNTWFAEHHKPAVFERDTAPFLEIC
YADPDFDADGDVANKSAKTCVSDPVGRDQEDEDDYDEDVDGDDHKLGCEK
APLGSGRSSKAVSYQDIHSAYTKRRFQHVTSKVGQYIAEIQAQDQKRRNV
KFAGFQRVNSMPESLTPTLQQVYVHDGDFKVDKNCQTHSNSDSNYNSNSN
NSSSSFDRLLAENESLQQKINSLRVEAKRLQGFNEYVQERLDRKTDDFVK
MKCNFETLRTELSECQQKLRRQQDNSQHHFMYHIRSATSAKATQTDFLVD
TIPASGNVLVTPHPLGDLTYNSSKGSIELALLSVAPSARVAQNPVQVQRA
IHPQSLDFSSVSTEADGSGSGEHRVETSSRALVRRTPAPNNSETSQPSSN
DSAIEVEAHEEERPSSRRQWEQQGELISPRQWGQHEGMYYFDKRNNRVIE
VMGFNISQGRNQSHDTIHNQSINDSQTRLLVHSMSMSHLEAHDHFRSKRT
TLGSRMLRFLGPCVRCRNGDPLNRSNVTYKDGLPAMPEEEFVDQRNQRAS
FLDH

BO10432.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
swa-PA 548 CG3429-PA 1..548 1..548 2872 100 Plus