Clone BO10457 Report

Search the DGRC for BO10457

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:104
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG3071-RA
Protein status:BO10457.pep: validated full length
Sequenced Size:1639

Clone Sequence Records

BO10457.3prime Sequence

885 bp (790 high quality bases) assembled on 2006-04-19

> BO10457.3prime
ATGGTCTAGAAAGCTTGCCTCAACTAAGACCACATAATTTTGCGCCGCCA
CGGAGGGATGCATCTTAGGTGTCTTTGTCTCCACATAGGTGGGCTTATGG
GCTACCTCGCTATTGTCCATTGAAATCCCAATGAGCATATCCACAGCACC
CTTCATCCGCATCAGCTCGGCGGTGAGCCTCACCTCCTCCTGCATTGCAA
GTGACAATCGTTGCAAGGCTTTCATCAGCTTCTGGCTGTAGGCCACCAAT
CGTTGCTCGAAGACATCAAGGACCGTGCTCGCGGCCATCATCAGCGGGCG
CATGAATCGCACCTCGCCCAAGTGGTTGCAAATGAAGTCGATGAATCGGA
CAAGCGCTGCCTCATGACGACCCGTGAGGGCTTTTCCCAGTGATCCACGG
TGCAGAAGGTCCGTGATGACAGCCACAATGAGCTCCGGCTGGTATTGCAT
CTTCTGCGCATTCATCACGTCGTCCAAAGCCTTCTTGTGGTTAAACTGGC
GCAAGTGCACATCGTAGGATTTCAATCCAGGCCCCTTGACGTGGTCCTTG
ATGGTGTGATCAACCTCTTGGGTGTTGTTCGTGCGTTTCGTACTCACGAA
GTACTTTCGAGCGCGATCCGCACGAATCTTTTTCAAATGACTGGGCTTGC
TGTCTACCATCATGCGACGAATGGAGACTAGACCATCGACCATTCCAGCC
ACAACTGCTTGATCTCCGTCAGCAACAGCCATGCTGACCACCGCATTGGG
ATAAGTCAATGTGTGCACTGTTTTGTAGGTGCTCACATCGTAGATTTTCA
CGTGCCTATCGAGCCCGCCTGAGAGCAATCTCCTGCCATCGGATCCCATT
CGCAGACAAGTTACTGTTTTGTGATGCTGCGACAT

BO10457.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-PA 1608 CG3071-RA 739..1605 885..19 4310 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-RA 1921 CG3071-RA 798..1664 885..19 4320 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2263702..2264568 885..19 4320 99.9 Minus
Blast to na_te.dros performed on 2015-02-12 13:16:52 has no hits.

BO10457.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:32 Download gff for BO10457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-PA 739..1608 16..885 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:54:44 Download gff for BO10457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-PA 739..1608 16..885 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 01:58:48 Download gff for BO10457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 798..1664 19..885 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:43:43 Download gff for BO10457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 798..1664 19..885 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 16:43:43 Download gff for BO10457.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2263702..2264568 19..885 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 01:58:48 Download gff for BO10457.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2157735..2158601 19..885 99   Minus

BO10457.5prime Sequence

921 bp (767 high quality bases) assembled on 2006-04-19

> BO10457.5prime
GAAGTTATCAGTCGACATGCAGAACTCCTTTCTTCCACTGAACACACGGC
GTTTTCGACAGCGGGCCCAGGTGGAAACGCCGGATACGGTGTACTGGGAC
CGACTGGCGAAACCAGAACTACTCAAGGAGCACAACACCATCGATTATTT
GGACTTCAGTCCAAGCGATCCTGACAACTTTGTTGTGACCTGTTCGGTGC
GCGTTCAGATTTACAACCTGGTGACCATGCTTGTGGTAAAGAACCTTTCC
CGATTCCAAAAGACCGCATACGGCGCCACCTTCCGGCAGGATGGTCGACT
CCTGGCCGCCGGCGACGAGGAGGGCCATGTCAAGCTATTCGACACCACCA
GTCGCAACATCTTGCGTTTGTTCAAGGGACACACGGCACCAGTACACCGC
ACCTTCTTTACGGCGGACAAGCTGCAGCTAGCCAGTTTTGGAGACGACAA
GTCGGTCCGTCTGTGGGACGTGGCAAACGAGAAGGTGGTGCAAACGTACG
AGGACACGCACACCGACTACGTTCGTGCAGGCGCCATGCATCCGCAGGCA
GGGCATATGTTCGTCTCCGGCGGCTACGATGGCAAGATCAAACTGTACGA
TACGAGAGCGGAAACGGCGGTGCAGCGCACCTTAGATCACGGAGCTCCGG
TGGAGTCCATGTTGTTCCTTCCGAACGGCTCTATTTTCGTCAGCGCCGGC
GGCAGCCAGGTGCGCGTATGGGATCTCATCAGCGGCTGCCGTCTGCTCAC
CATGATGTCGCAGCATCACAAAACAGTAACTTGTCTGCGACTGGGATCCG
ATGGCAGGAGATTGCTCTCAGGCGGGCTCGATAGGCACGTGAAAATCTAC
GATGTGAGCACCTACAAAACAGTGCACACATTGACTTATCCCAATGCGGT
GGTCAGCATGGCTGTTGCTGA

BO10457.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-PA 1608 CG3071-RA 1..905 17..921 4525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-RA 1921 CG3071-RA 60..964 17..921 4525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:09:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2263056..2263868 109..921 4065 100 Plus
X 23542271 X 2262896..2262988 17..109 465 100 Plus
Blast to na_te.dros performed on 2015-02-11 12:09:41 has no hits.

BO10457.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:33 Download gff for BO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-PA 1..904 17..920 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:54:45 Download gff for BO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-PA 1..904 17..920 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:26:29 Download gff for BO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 52..963 9..920 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:44:09 Download gff for BO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 52..963 9..920 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:44:09 Download gff for BO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2262888..2262988 9..109 96 -> Plus
X 2263057..2263867 110..920 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:26:29 Download gff for BO10457.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2156921..2157021 9..109 96 -> Plus
arm_X 2157090..2157900 110..920 100   Plus

BO10457.complete Sequence

1639 bp (1639 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631770

> BO10457.complete
GAAGTTATCAGTCGACATGCAGAACTCCTTTCTTCCACTGAACACACGGC
GTTTTCGACAGCGGGCCCAGGTGGAAACGCCGGATACGGTGTACTGGGAC
CGACTGGCGAAACCAGAACTACTCAAGGAGCACAACACCATCGATTATTT
GGACTTCAGTCCAAGCGATCCTGACAACTTTGTTGTGACCTGTTCGGTGC
GCGTTCAGATTTACAACCTGGTGACCATGCTTGTGGTAAAGAACCTTTCC
CGATTCCAAAAGACCGCATACGGCGCCACCTTCCGGCAGGATGGTCGACT
CCTGGCCGCCGGCGACGAGGAGGGCCATGTCAAGCTATTCGACACCACCA
GTCGCAACATCTTGCGTTTGTTCAAGGGACACACGGCACCAGTACACCGC
ACCTTCTTTACGGCGGACAAGCTGCAGCTAGCCAGTTTTGGAGACGACAA
GTCGGTCCGTCTGTGGGACGTGGCAAACGAGAAGGTGGTGCAAACGTACG
AGGACACGCACACCGACTACGTTCGTGCAGGCGCCATGCATCCGCAGGCA
GGGCATATGTTCGTCTCCGGCGGCTACGATGGCAAGATCAAACTGTACGA
TACGAGAGCGGAAACGGCGGTGCAGCGCACCTTAGATCACGGAGCTCCGG
TGGAGTCCATGTTGTTCCTTCCGAACGGCTCTATTTTCGTCAGCGCCGGC
GGCAGCCAGGTGCGCGTATGGGATCTCATCAGCGGCTGCCGTCTGCTCAC
CATGATGTCGCAGCATCACAAAACAGTAACTTGTCTGCGACTGGGATCCG
ATGGCAGGAGATTGCTCTCAGGCGGGCTCGATAGGCACGTGAAAATCTAC
GATGTGAGCACCTACAAAACAGTGCACACATTGACTTATCCCAATGCGGT
GGTCAGCATGGCTGTTGCTGACGGAGATCAAGCAGTTGTGGCTGGAATGG
TCGATGGTCTAGTCTCCATTCGTCGCATGATGGTAGACAGCAAGCCCAGT
CATTTGAAAAAGATTCGTGCGGATCGCGCTCGAAAGTACTTCGTGAGTAC
GAAACGCACGAACAACACCCAAGAGGTTGATCACACCATCAAGGACCACG
TCAAGGGGCCTGGATTGAAATCCTACGATGTGCACTTGCGCCAGTTTAAC
CACAAGAAGGCTTTGGACGACGTGATGAATGCGCAGAAGATGCAATACCA
GCCGGAGCTCATTGTGGCTGTCATCACGGACCTTCTGCACCGTGGATCAC
TGGGAAAAGCCCTCACGGGTCGTCATGAGGCAGCGCTTGTCCGATTCATC
GACTTCATTTGCAACCACTTGGGCGAGGTGCGATTCATGCGCCCGCTGAT
GATGGCCGCGAGCACGGTCCTTGATGTCTTCGAGCAACGATTGGTGGCCT
ACAGCCAGAAGCTGATGAAAGCCTTGCAACGATTGTCACTTGCAATGCAG
GAGGAGGTGAGGCTCACCGCCGAGCTGATGCGGATGAAGGGTGCTGTGGA
TATGCTCATTGGGATTTCAATGGACAATAGCGAGGTAGCCCATAAGCCCA
CCTATGTGGAGACAAAGACACCTAAGATGCATCCCTCCGTGGCGGCGCAA
AATTATGTGGTCTTAGTTGAGGCAAGCTTTCTAGACCAT

BO10457.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-RA 1608 CG3071-PA 1..1605 17..1621 8025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-RA 1921 CG3071-RA 60..1664 17..1621 8025 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2263056..2264568 109..1621 7565 100 Plus
X 23542271 X 2262896..2262988 17..109 465 100 Plus
Blast to na_te.dros performed on 2014-11-27 15:16:37 has no hits.

BO10457.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:36 Download gff for BO10457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 1..1608 17..1624 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:21:09 Download gff for BO10457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 47..1659 9..1621 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:27 Download gff for BO10457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 60..1664 17..1623 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:36 Download gff for BO10457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 47..1659 9..1621 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:57 Download gff for BO10457.complete
Subject Subject Range Query Range Percent Splice Strand
CG3071-RA 60..1664 17..1623 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:57 Download gff for BO10457.complete
Subject Subject Range Query Range Percent Splice Strand
X 2262896..2262988 17..109 100 -> Plus
X 2263057..2264568 110..1623 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:27 Download gff for BO10457.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2156929..2157021 17..109 100 -> Plus
arm_X 2157090..2158601 110..1623 99   Plus

BO10457.pep Sequence

Translation from 16 to 1639

> BO10457.pep
MQNSFLPLNTRRFRQRAQVETPDTVYWDRLAKPELLKEHNTIDYLDFSPS
DPDNFVVTCSVRVQIYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAGD
EEGHVKLFDTTSRNILRLFKGHTAPVHRTFFTADKLQLASFGDDKSVRLW
DVANEKVVQTYEDTHTDYVRAGAMHPQAGHMFVSGGYDGKIKLYDTRAET
AVQRTLDHGAPVESMLFLPNGSIFVSAGGSQVRVWDLISGCRLLTMMSQH
HKTVTCLRLGSDGRRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAVVSMAV
ADGDQAVVAGMVDGLVSIRRMMVDSKPSHLKKIRADRARKYFVSTKRTNN
TQEVDHTIKDHVKGPGLKSYDVHLRQFNHKKALDDVMNAQKMQYQPELIV
AVITDLLHRGSLGKALTGRHEAALVRFIDFICNHLGEVRFMRPLMMAAST
VLDVFEQRLVAYSQKLMKALQRLSLAMQEEVRLTAELMRMKGAVDMLIGI
SMDNSEVAHKPTYVETKTPKMHPSVAAQNYVVLVEASFLDH

BO10457.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG3071-PA 535 CG3071-PA 1..535 1..535 2754 100 Plus
wds-PB 361 CG17437-PB 68..312 77..318 238 25.1 Plus
wds-PA 361 CG17437-PA 68..312 77..318 238 25.1 Plus
Rack1-PC 318 CG7111-PC 11..296 35..314 229 26.9 Plus
Rack1-PD 318 CG7111-PD 11..296 35..314 229 26.9 Plus
wds-PB 361 CG17437-PB 105..324 79..289 197 26.9 Plus
wds-PA 361 CG17437-PA 105..324 79..289 197 26.9 Plus