Clone Sequence Records
BO10459.3prime Sequence
941 bp (838 high quality bases) assembled on 2006-04-19
> BO10459.3prime
ATGGTCTAGAAAGCTTGCAAGGACTTCTTCCCGCGCCACATACGACAGCA
TAAACTCGATTTTGCGAACCAGTTGCGCCAGTTTGGTGCGATCCAATTGC
ACACTTCCGCTGGCCAAAGCGAACAGCTTCTGGAACTCGGCTTCCTGGGT
ATTCTTACGGCGACTGATTGCCTTCGTCTGCTGCAGCAGATAGAGAACAT
CACTAAGGGCGGCCAACTTGTGCTCCTTCGTAGCCATCAACTGGCGGGCA
TCCTGCTGCAGCTGCTCCCTGTTGTCGACGAGGAAATTGGCACCTCCTGC
AGCACTTCCAACTGCAGCCGCGCCGGCAGGACCATTACCCGTGGTGATGG
CTTCCATCTCTACGGAGACAATAGCGTCCTCAGCATCCTCGAAGTTGGTG
CCGTACTTTAAGGTGGCGCTGAGATTGACAAGGTGGGCCACTGCCTCGCT
GGCATTGGTCCTCTGTTCGCCGCCAAAGAAACGAGCCACACAGGCGTAGG
CGCTTAGTATGTTCCACAAATTGTAGTGCAGGCACGGAGACGGAGTTTTC
TTGCATATATCGGAGAATTTGGCAATGCTCCCGAAAATTTCGGGAACACG
GCTCTCTTTCTTGGCAGCTTCTTCGGGTGTAGGTATAATCACAATCTTAG
AGTTCTTCGGCTTGATCCACCAGGGCTTGTAGTCTGGCATAAGCTTCATG
ATATCTCCATTGGTGATCAATTTCTGGAACTCATCTTGCTCCTCTGTAGT
TAACCGGCTCCAAACTTCATCCGCATCGTTGATATCAACGCCTTTCAGTC
GAGTTGCAATGTCTTCCTCCAGGTCTTCATCCAGTATGTCCCCCTCGGTG
ACGTTTTCTTCCGCCTCATCTTCTTCTGACTCTCCTTCCTCGCCTCCATC
CGAGTCCAAACTATTTTCCAGGCCATCTGTATCAAATTCCT
BO10459.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-PA | 987 | CG31223-RA | 62..984 | 941..19 | 4615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:03:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 321..1243 | 941..19 | 4615 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831506..20832428 | 941..19 | 4615 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:03:10 has no hits.
BO10459.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:36 Download gff for
BO10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 62..987 | 15..941 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:54:49 Download gff for
BO10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 62..987 | 15..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:51:55 Download gff for
BO10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 321..1252 | 9..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:34:45 Download gff for
BO10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 321..1252 | 9..941 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:34:45 Download gff for
BO10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831506..20832437 | 9..941 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:51:55 Download gff for
BO10459.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657228..16658159 | 9..941 | 99 | | Minus |
BO10459.5prime Sequence
910 bp (789 high quality bases) assembled on 2006-04-19
> BO10459.5prime
GAAGTTATCAGTCGACATGCGGAAAATATACGACATACTGAAGAGGATGA
GAGAAACGGACAGTGGTTTCAATCCCCAGGAATTTGATACAGATGGCCTG
GAAAATAGTTTGGACTCGGATGGAGGCGAGGAAGGAGAGTCAGAAGAAGA
TGAGGCGGAAGAAAACGTCACCGAGGGGGACATACTGGATGAAGACCTGG
AGGAAGACATTGCAACTCGACTGAAAGGCGTTGATATCAACGATGCGGAT
GAAGTTTGGAGCCGGTTAACTACAGAGGAGCAAGATGAGTTCCAGAAATT
GATCACCAATGGAGATATCATGAAGCTTATGCCAGACTACAAGCCCTGGT
GGATCAAGCCGAAGAACTCTAAGATTGTGATTATACCTACACCCGAAGAA
GCTGCCAAGAAAGAGAGCCGTGTTCCCGAAATTTTCGGGAGCATTGCCAA
ATTCTCCGATATATGCAAGAAAACTCCGTCTCCGTGCCTGCACTACAATT
TGTGGAACATACTAAGCGCCTACGCCTGTGTGGCTCGTTTCTTTGGCGGC
GAACAGAGGACCAATGCCAGCGAGGCAGTGGCCCACCTTGTCAATCTCAG
CGCCACCTTAAAGTACGGCACCAACTTCGAGGATGCTGAGGACGCTATTG
TCTCCGTAGAGATGGAAGCCATCACCACGGGTAATGGTCCTGCCGGCGCG
GCTGCAGTTGGAAGTGCTGCAGGAGGTGCCAATTTCCTCGTCGACAACAG
GGAGCAGCTGCAGCAGGATGCCCGCCAGTTGATGGCTACGAANGAGCACA
AGTTGGCCGCCCTTAGTGATGTTCTCTATCTGCTGCAGCAGACGAAGGCA
ATCAGTCGCCGTAAGAATACCCAGGAAGCCGAGTTCCAGAGCTGTTCGCT
TTGGCCAGCG
BO10459.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-PA | 987 | CG31223-RA | 1..874 | 17..890 | 4351 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 12:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 257..1154 | 14..910 | 4454 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 12:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831442..20832339 | 14..910 | 4429 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-02 12:56:17 has no hits.
BO10459.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:37 Download gff for
BO10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 1..895 | 17..910 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:54:50 Download gff for
BO10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 1..895 | 17..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:04:39 Download gff for
BO10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 255..1154 | 10..910 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:44:51 Download gff for
BO10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 255..1154 | 10..910 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:44:51 Download gff for
BO10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831440..20832339 | 10..910 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:04:39 Download gff for
BO10459.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657162..16658061 | 10..910 | 99 | | Plus |
BO10459.complete Sequence
1018 bp (1018 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ631771
> BO10459.complete
GAAGTTATCAGTCGACATGCGGAAAATATACGACATACTGAAGAGGATGA
GAGAAACGGACAGTGGTTTCAATCCCCAGGAATTTGATACAGATGGCCTG
GAAAATAGTTTGGACTCGGATGGAGGCGAGGAAGGAGAGTCAGAAGAAGA
TGAGGCGGAAGAAAACGTCACCGAGGGGGACATACTGGATGAAGACCTGG
AGGAAGACATTGCAACTCGACTGAAAGGCGTTGATATCAACGATGCGGAT
GAAGTTTGGAGCCGGTTAACTACAGAGGAGCAAGATGAGTTCCAGAAATT
GATCACCAATGGAGATATCATGAAGCTTATGCCAGACTACAAGCCCTGGT
GGATCAAGCCGAAGAACTCTAAGATTGTGATTATACCTACACCCGAAGAA
GCTGCCAAGAAAGAGAGCCGTGTTCCCGAAATTTTCGGGAGCATTGCCAA
ATTCTCCGATATATGCAAGAAAACTCCGTCTCCGTGCCTGCACTACAATT
TGTGGAACATACTAAGCGCCTACGCCTGTGTGGCTCGTTTCTTTGGCGGC
GAACAGAGGACCAATGCCAGCGAGGCAGTGGCCCACCTTGTCAATCTCAG
CGCCACCTTAAAGTACGGCACCAACTTCGAGGATGCTGAGGACGCTATTG
TCTCCGTAGAGATGGAAGCCATCACCACGGGTAATGGTCCTGCCGGCGCG
GCTGCAGTTGGAAGTGCTGCAGGAGGTGCCAATTTCCTCGTCGACAACAG
GGAGCAGCTGCAGCAGGATGCCCGCCAGTTGATGGCTACGAAGGAGCACA
AGTTGGCCGCCCTTAGTGATGTTCTCTATCTGCTGCAGCAGACGAAGGCA
ATCAGTCGCCGTAAGAATACCCAGGAAGCCGAGTTCCAGAAGCTGTTCGC
TTTGGCCAGCGGAAGTGTGCAATTGGATCGCACCAAACTGGCGCAACTGG
TTCGCAAAATCGAGTTTATGCTGTCGTATGTGGCGCGGGAAGAAGTCCTT
GCAAGCTTTCTAGACCAT
BO10459.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:57:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 987 | CG31223-PA | 1..984 | 17..1000 | 4920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:57:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 257..1243 | 14..1000 | 4935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:57:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831442..20832428 | 14..1000 | 4935 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:57:02 has no hits.
BO10459.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:02:30 Download gff for
BO10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 1..987 | 17..1004 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:35:00 Download gff for
BO10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 190..1187 | 10..1010 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:42:10 Download gff for
BO10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 260..1243 | 17..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:02:30 Download gff for
BO10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 190..1187 | 10..1010 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:11:28 Download gff for
BO10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 260..1243 | 17..1002 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:11:28 Download gff for
BO10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831445..20832428 | 17..1002 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:42:10 Download gff for
BO10459.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657167..16658150 | 17..1002 | 99 | | Plus |
BO10459.pep Sequence
Translation from 16 to 1018
> BO10459.pep
MRKIYDILKRMRETDSGFNPQEFDTDGLENSLDSDGGEEGESEEDEAEEN
VTEGDILDEDLEEDIATRLKGVDINDADEVWSRLTTEEQDEFQKLITNGD
IMKLMPDYKPWWIKPKNSKIVIIPTPEEAAKKESRVPEIFGSIAKFSDIC
KKTPSPCLHYNLWNILSAYACVARFFGGEQRTNASEAVAHLVNLSATLKY
GTNFEDAEDAIVSVEMEAITTGNGPAGAAAVGSAAGGANFLVDNREQLQQ
DARQLMATKEHKLAALSDVLYLLQQTKAISRRKNTQEAEFQKLFALASGS
VQLDRTKLAQLVRKIEFMLSYVAREEVLASFLDH
BO10459.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:17:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-PA | 328 | CG31223-PA | 1..328 | 1..328 | 1670 | 100 | Plus |
