Clone Sequence Records
BO10463.3prime Sequence
930 bp (822 high quality bases) assembled on 2006-04-19
> BO10463.3prime
ATGGTCTAGAAAGCTTGCGTAACCGTACTTGTCTTGCCACGAGGTCATCA
CATCATTGGCCAGGTTGCTCAGACGGCCGGCCACTTTGTGTACACCCTGG
CGTACGCTTTCTTTTACGCTTTCCACATCCAAGTCCGGTGCACTGAAGTT
GACCGAAGATGCCCTATTGCCCCCAGTGCCACCAGGGGAGCCGTCCCCAA
AATAGTCCGACGAAGATATGGCTCGCGATCCCTGGAAGCGGTTCAAGCTT
GCGCTTACATCGGCCGAAGACTGTTCGCTGGCGAAGTACTGGTCGGAGCC
GAAACCCTTGGAGTTGCCGAACTTTTGCTGGGCGATCACGGGATCTGTGC
TCGTTCCTCCTTTGGTGTGGGTTTGCGATGAACCACTATTCTTCTTAACG
GGCGCCGACGTTTTGGGTTTGTCATAGTCATTGCTGCGAGAAAACATGGA
CGTGATATTGCTGTGGCTACCCCCAATAGGCTCAATTGTCTCGTAGCCCA
GCGCATCAAGTTCAAACTTATCAAGCTTGCTTGTTCCGCCAACTGAGCTC
TCCCGCTTTTCGCTAGATCCTCCTCCTCCTCCACCGCTGCTACTATTTCC
GTATAGGGAAAAGTCAGTGAAAAAATTCTCGCTTTCCAATAAGGAGAGTT
TTGCTTTAGGGGCGGCCGACTGCTGAATAGTCTCCATATCGCCGAGAGCG
GAGTGGGCCATGTCGGAGCCTCGCAGGTTGAAGCCCATGCCCAGCCGCTC
CATCTGTTTAGCCTTAGCAGGGTCCATGGTCTTAAGCTTGGCCTCCTCGC
GGGTCTTCTGCATGGAGAGTTCTTGGTATGCCAATCGCATGCTGGGCACC
GTCTCTAGTTCGTCCTCGGCCGTCTGTGGCTTGACCACAGGTGCTGCTGC
AGCTGATGTCTTCATCTCGTTAGCCGCGTT
BO10463.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6838-PA | 1659 | CG6838-RA | 745..1656 | 930..19 | 4510 | 99.7 | Minus |
CG6838-PB | 1659 | CG6838-RB | 745..1656 | 930..19 | 4510 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:11:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ArfGAP3-RG | 2298 | CG6838-RG | 848..1759 | 930..19 | 4530 | 99.8 | Minus |
ArfGAP3-RF | 2193 | CG6838-RF | 743..1654 | 930..19 | 4530 | 99.8 | Minus |
ArfGAP3-RE | 2190 | CG6838-RE | 740..1651 | 930..19 | 4530 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:11:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22715155..22715923 | 162..930 | 3830 | 99.9 | Plus |
3L | 28110227 | 3L | 22714947..22715090 | 19..162 | 705 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-11 11:11:31 has no hits.
BO10463.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:45 Download gff for
BO10463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6838-PB | 745..1659 | 16..930 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:54:59 Download gff for
BO10463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6838-PB | 745..1659 | 16..930 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:53:02 Download gff for
BO10463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ArfGAP3-RE | 740..1651 | 19..930 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:37:15 Download gff for
BO10463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ArfGAP3-RE | 740..1651 | 19..930 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:37:15 Download gff for
BO10463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22714947..22715089 | 19..161 | 99 | <- | Plus |
3L | 22715155..22715923 | 162..930 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:53:02 Download gff for
BO10463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22708047..22708189 | 19..161 | 99 | <- | Plus |
arm_3L | 22708255..22709023 | 162..930 | 99 | | Plus |
BO10463.5prime Sequence
898 bp (718 high quality bases) assembled on 2006-04-19
> BO10463.5prime
GAAGTTATCAGTCGACATGGCCAGTCCAGCAGCAGGACCCTCCAAGCAGG
AGATCGAGTCGGTCTTCAGTCGCCTGCGCGCCCAGCCAGCTAACAAATCC
TGCTTCGACTGCGCTGCCAAGGCTCCCACCTGGTCCTCCGTTACCTATGG
CATCTTCATTTGCATCGACTGTTCTGCCGTGCACCGCAACTTGGGCGTGC
ATCTGACCTTCGTGCGCAGCACCAACCTGGACACCAACTGGACCTGGCTC
CAGCTCCGCCAGATGCAACTGGGCGGCAACGCGAACGCCGCGCAATTCTT
CCGCGCCCACAACTGCAGCACCACCGACGCCCAGGTCAAGTACAACTCGC
GGGCGGCCCAGCTTTATAGGGACAAGCTGTGTGCCCAGGCCCAGCAGGCC
ATGAAGACGCACGGCACAAAGCTGCATTTGGAACAGACGGACAAGAGCGA
GGGCAACGAAGCCGCTAGGGAGGAGGACTTCTTTGCCCAGTGTGACAATG
AGGTGGACTTCAATGTCCAGAACAACAATGTCAGTAAGGATCCAAACCCA
CCCACCGTTGCTCCGGTCATCAGCGTTGAAACGCAACAAGGTGGCGCCCC
CAGCGTGAATCTGCTTAATTCCGTGGTGCCGGCAGCAGTGCCGTCGTCCA
TAGGCGCGCGAAAGGTGCAGCCGAAGAAGGGTGGACTGGGTGCTCGCAAA
GTGGGCGGTCTTGGAGCCACGAAAGTTAAGACTAACTTCGCAGACATCGA
GGCCCGTGCCAACGCGGCTAACGAGATGAAGACATCAGCTGCAGCAGCAC
CTGTGGTCAAGCCACAGACGGGCGAGGACGAACTAGAGACGGTGGCCAGC
ATGCGATTGGCATACCAAGAACTCTCCATGCAGAAGACCCGCGAGGAG
BO10463.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6838-PA | 1659 | CG6838-RA | 1..882 | 17..898 | 4385 | 99.8 | Plus |
CG6838-PB | 1659 | CG6838-RB | 1..882 | 17..898 | 4385 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:49:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ArfGAP3-RC | 2580 | CG6838-RC | 382..1267 | 13..898 | 4415 | 99.9 | Plus |
ArfGAP3-RB | 2307 | CG6838-RB | 109..994 | 13..898 | 4415 | 99.9 | Plus |
ArfGAP3-RA | 2689 | CG6838-RA | 396..1281 | 13..898 | 4415 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:49:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22716569..22716892 | 421..98 | 1620 | 100 | Minus |
3L | 28110227 | 3L | 22715786..22715998 | 898..686 | 1050 | 99.5 | Minus |
3L | 28110227 | 3L | 22716049..22716204 | 692..537 | 750 | 98.7 | Minus |
3L | 28110227 | 3L | 22716297..22716416 | 539..420 | 600 | 100 | Minus |
3L | 28110227 | 3L | 22716971..22717055 | 97..13 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 00:49:45 has no hits.
BO10463.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:46 Download gff for
BO10463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6838-PB | 1..882 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:01 Download gff for
BO10463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6838-PB | 1..882 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:17:00 Download gff for
BO10463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ArfGAP3-RA | 392..1281 | 9..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:10:41 Download gff for
BO10463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ArfGAP3-RA | 392..1281 | 9..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:10:41 Download gff for
BO10463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22715786..22715998 | 686..898 | 99 | <- | Minus |
3L | 22716056..22716202 | 539..685 | 100 | <- | Minus |
3L | 22716298..22716414 | 422..538 | 100 | <- | Minus |
3L | 22716569..22716892 | 98..421 | 100 | <- | Minus |
3L | 22716971..22717059 | 9..97 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:17:00 Download gff for
BO10463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22708886..22709098 | 686..898 | 99 | <- | Minus |
arm_3L | 22709156..22709302 | 539..685 | 100 | <- | Minus |
arm_3L | 22709398..22709514 | 422..538 | 100 | <- | Minus |
arm_3L | 22709669..22709992 | 98..421 | 100 | <- | Minus |
arm_3L | 22710071..22710159 | 9..97 | 97 | | Minus |
BO10463.complete Sequence
1690 bp (1690 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631774
> BO10463.complete
GAAGTTATCAGTCGACATGGCCAGTCCAGCAGCAGGACCCTCCAAGCAGG
AGATCGAGTCGGTCTTCAGTCGCCTGCGCGCCCAGCCAGCTAACAAATCC
TGCTTCGACTGCGCTGCCAAGGCTCCCACCTGGTCCTCCGTTACCTATGG
CATCTTCATTTGCATCGACTGTTCTGCCGTGCACCGCAACTTGGGCGTGC
ATCTGACCTTCGTGCGCAGCACCAACCTGGACACCAACTGGACCTGGCTC
CAGCTCCGCCAGATGCAACTGGGCGGCAACGCGAACGCCGCGCAATTCTT
CCGCGCCCACAACTGCAGCACCACCGACGCCCAGGTCAAGTACAACTCGC
GGGCGGCCCAGCTTTATAGGGACAAGCTGTGTGCCCAGGCCCAGCAGGCC
ATGAAGACGCACGGCACAAAGCTGCATTTGGAACAGACGGACAAGAGCGA
GGGCAACGAAGCCGCTAGGGAGGAGGACTTCTTTGCCCAGTGTGACAATG
AGGTGGACTTCAATGTCCAGAACAACAATGTCAGTAAGGATCCAAACCCA
CCCACCGTTGCTCCGGTCATCAGCGTTGAAACGCAACAAGGTGGCGCCCC
CAGCGTGAATCTGCTTAATTCCGTGGTGCCGGCAGCAGTGCCGTCGTCCA
TAGGCGCGCGAAAGGTGCAGCCGAAGAAGGGTGGACTGGGTGCTCGCAAA
GTGGGCGGTCTTGGAGCCACGAAAGTTAAGACTAACTTCGCAGACATCGA
GGCCCGTGCCAACGCGGCTAACGAGATGAAGACATCAGCTGCAGCAGCAC
CTGTGGTCAAGCCACAGACGGCCGAGGACGAACTAGAGACGGTGGCCAGC
ATGCGATTGGCATACCAAGAACTCTCCATGCAGAAGACCCGCGAGGAGGC
CAAGCTTAAGACCATGGACCCTGCTAAGGCTAAACAGATGGAGCGGCTGG
GCATGGGCTTCAACCTGCGAGGCTCCGACATGGCCCACTCCGCTCTCGGC
GATATGGAGACTATTCAGCAGTCGGCCGCCCCTAAAGCAAAACTCTCCTT
ATTGGAAAGCGAGAATTTTTTCACTGACTTTTCCCTATACGGAAATAGTA
GCAGCGGTGGAGGAGGAGGAGGATCTAGCGAAAAGCGGGAGAGCTCAGTT
GGCGGAACAAGCAAGCTTGATAAGTTTGAACTTGATGCGCTGGGCTACGA
GACAATTGAGCCTATTGGGGGTAGCCACAGCAATATCACGTCCATGTTTT
CTCGCAGCAATGACTATGACAAACCCAAAACGTCGGCGCCCGTTAAGAAG
AATAGTGGTTCATCGCAAACCCACACCAAAGGAGGAACGAGCACAGATCC
CGTGATCGCCCAGCAAAAGTTCGGCAACTCCAAGGGTTTCGGCTCCGACC
AGTACTTCGCCAGCGAACAGTCTTCGGCCGATGTAAGCGCAAGCTTGAAC
CGCTTCCAGGGATCGCGAGCCATATCTTCGTCGGACTATTTTGGGGACGG
CTCCCCTGGTGGCACTGGGGGCAATAGGGCATCTTCGGTCAACTTCAGTG
CACCGGACTTGGATGTGGAAAGCGTAAAAGAAAGCGTACGCCAGGGTGTA
CACAAAGTGGCCGGCCGTCTGAGCAACCTGGCCAATGATGTGATGACCTC
GTGGCAAGACAAGTACGGTTACGCAAGCTTTCTAGACCAT
BO10463.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ArfGAP3-RC | 1659 | CG6838-PC | 1..1656 | 17..1672 | 8265 | 99.9 | Plus |
ArfGAP3-RB | 1659 | CG6838-PB | 1..1656 | 17..1672 | 8265 | 99.9 | Plus |
ArfGAP3-RA | 1659 | CG6838-PA | 1..1656 | 17..1672 | 8265 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ArfGAP3-RC | 2580 | CG6838-RC | 382..2041 | 13..1672 | 8285 | 99.9 | Plus |
ArfGAP3-RB | 2307 | CG6838-RB | 109..1768 | 13..1672 | 8285 | 99.9 | Plus |
ArfGAP3-RA | 2689 | CG6838-RA | 396..2055 | 13..1672 | 8285 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22715155..22715998 | 1529..686 | 4220 | 100 | Minus |
3L | 28110227 | 3L | 22716569..22716892 | 421..98 | 1620 | 100 | Minus |
3L | 28110227 | 3L | 22716049..22716204 | 692..537 | 750 | 98.7 | Minus |
3L | 28110227 | 3L | 22714947..22715090 | 1672..1529 | 705 | 99.3 | Minus |
3L | 28110227 | 3L | 22716297..22716416 | 539..420 | 600 | 100 | Minus |
3L | 28110227 | 3L | 22716971..22717055 | 97..13 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:10:50 has no hits.
BO10463.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:57:36 Download gff for
BO10463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6838-RC | 1..1659 | 17..1675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:15:03 Download gff for
BO10463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6838-RC | 378..2041 | 9..1672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:48 Download gff for
BO10463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ArfGAP3-RA | 400..2055 | 17..1674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:57:37 Download gff for
BO10463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6838-RC | 378..2041 | 9..1672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:05:13 Download gff for
BO10463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ArfGAP3-RA | 400..2055 | 17..1674 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:05:13 Download gff for
BO10463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22714944..22715089 | 1530..1674 | 97 | <- | Minus |
3L | 22715155..22715998 | 686..1529 | 100 | <- | Minus |
3L | 22716056..22716202 | 539..685 | 100 | <- | Minus |
3L | 22716298..22716414 | 422..538 | 100 | <- | Minus |
3L | 22716569..22716892 | 98..421 | 100 | <- | Minus |
3L | 22716971..22717051 | 17..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:48 Download gff for
BO10463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22710071..22710151 | 17..97 | 100 | | Minus |
arm_3L | 22709669..22709992 | 98..421 | 100 | <- | Minus |
arm_3L | 22708044..22708189 | 1530..1674 | 97 | <- | Minus |
arm_3L | 22708255..22709098 | 686..1529 | 100 | <- | Minus |
arm_3L | 22709156..22709302 | 539..685 | 100 | <- | Minus |
arm_3L | 22709398..22709514 | 422..538 | 100 | <- | Minus |
BO10463.pep Sequence
Translation from 16 to 1690
> BO10463.pep
MASPAAGPSKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICI
DCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQMQLGGNANAAQFFRAHNC
STTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHGTKLHLEQTDKSEGNEAA
REEDFFAQCDNEVDFNVQNNNVSKDPNPPTVAPVISVETQQGGAPSVNLL
NSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANA
ANEMKTSAAAAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTM
DPAKAKQMERLGMGFNLRGSDMAHSALGDMETIQQSAAPKAKLSLLESEN
FFTDFSLYGNSSSGGGGGGSSEKRESSVGGTSKLDKFELDALGYETIEPI
GGSHSNITSMFSRSNDYDKPKTSAPVKKNSGSSQTHTKGGTSTDPVIAQQ
KFGNSKGFGSDQYFASEQSSADVSASLNRFQGSRAISSSDYFGDGSPGGT
GGNRASSVNFSAPDLDVESVKESVRQGVHKVAGRLSNLANDVMTSWQDKY
GYASFLDH
BO10463.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:33:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ArfGAP3-PC | 552 | CG6838-PC | 1..552 | 1..552 | 2833 | 100 | Plus |
ArfGAP3-PB | 552 | CG6838-PB | 1..552 | 1..552 | 2833 | 100 | Plus |
ArfGAP3-PA | 552 | CG6838-PA | 1..552 | 1..552 | 2833 | 100 | Plus |
ArfGAP3-PH | 553 | CG6838-PH | 1..553 | 1..552 | 2821 | 99.8 | Plus |
ArfGAP3-PG | 549 | CG6838-PG | 1..549 | 1..552 | 2806 | 99.5 | Plus |