Clone BO10464 Report

Search the DGRC for BO10464

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:104
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG32075-RA
Protein status:BO10464.pep: validated full length
Sequenced Size:1657

Clone Sequence Records

BO10464.3prime Sequence

932 bp (820 high quality bases) assembled on 2006-04-19

> BO10464.3prime
ATGGTCTAGAAAGCTTGCTTGAGCCCAAGGGAGCACACCCAATGCACATT
TGGGCCAATCGGTATGCTTGTCTAATTTCCAAACTCCCCAGTCTGATGTA
TGCTCTTTGCTTTGAGCTGCTTGTTCCAAAAATCGTTCCAAACGGTCTAG
ATTGTTGCTCTCCTCTGAAGAGCTATCTTCTTCCATAGCTTCCTCTTCAT
AAAATTCTTCAAGCTGTGCATCGCAGAGTTTAGTTAAATCCTCAATTTGC
GTCTTGGTGTATGGAGGATCTGCGAGCGGTAATAATCCTTTTAGAATGGG
CGCTGAGTAATTGCTAAATGCATCAACACGCTGCATAATAAAATCACGAT
CAAAAATCAAAGACCTGGACTTTTTGGGATTGTCGCCAAAAATAAGGGTA
ACCGAGAGATCGGCATTTGAGTGTACTAACAGACTGCGCATTGTCTTAGA
AATTTTATCCGTGTTTAGGGTGGCAAAGTCCGCTGGTTTTAGTTTATCGT
TCAAATCCAGTTCGGCTTTGTACATGCGCTTCATACGGAACAGCATCCCA
AATGTTTCCAACATTTTCTTTGCCCAGTAGCTGGCTCCCAGACGCCTTTG
CTCCGACTCGTTTTGGTTTTCACTCAGTTGAACTAGGGCCAAAAAAACCT
TCTCGATATATCCCTGCACGGCCAATAGACGGAAGAGTCCCTGTGTGGCT
GCAATGATGACATCCTCGTTGTCGTCGATTTCCAAGCCAACGCCAAGGAA
GTATTTCATTTTAAGCAGGCATTTTGTATATATGTCCAGCAGATCCTTCA
TCGATGATGACTCCTTTTTGACCAACGCACTTAGATCACCTAACACAGCA
CTCAGAATTTCTTTCGATGTCTTCGCCTTCTTGCTGGAGGAGTAGACTCG
TATCTTATTGATTCACCACTGGATTTTAGCTT

BO10464.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32075-PA 1626 CG32075-RA 731..1623 911..19 4465 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 16:52:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG32075-RB 1751 CG32075-RB 786..1700 932..19 4550 99.9 Minus
CG32075-RA 1955 CG32075-RA 990..1904 932..19 4550 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 16:52:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11063462..11063893 502..932 2110 99.8 Plus
3L 28110227 3L 11062903..11063124 66..287 1110 100 Plus
3L 28110227 3L 11063187..11063402 287..502 1080 100 Plus
3L 28110227 3L 11062777..11062823 19..65 235 100 Plus
Blast to na_te.dros performed on 2015-02-06 16:52:53 has no hits.

BO10464.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:47 Download gff for BO10464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-PA 709..1626 15..932 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:02 Download gff for BO10464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-PA 709..1626 15..932 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:28:00 Download gff for BO10464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 990..1907 15..932 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:22:01 Download gff for BO10464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 990..1907 15..932 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:22:01 Download gff for BO10464.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 11062773..11062823 15..65 96 <- Plus
3L 11062903..11063123 66..286 100 <- Plus
3L 11063187..11063401 287..501 100 <- Plus
3L 11063462..11063893 502..932 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:28:00 Download gff for BO10464.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11055873..11055923 15..65 96 <- Plus
arm_3L 11056003..11056223 66..286 100 <- Plus
arm_3L 11056287..11056501 287..501 100 <- Plus
arm_3L 11056562..11056993 502..932 99   Plus

BO10464.5prime Sequence

915 bp (784 high quality bases) assembled on 2006-04-19

> BO10464.5prime
GAAGTTATCAGTCGACATGGCTGTTGCAAAGAAGGAAAAATTTGAGGCAA
AAAAGAAAAGCCCTGAAAAGGGAAAACAGCAGAAAGCCAAAGTTGTTCCT
GTCACACCGCCACCAAATGTAAAACAACGAACTGTGGTCACTCCTTGGCG
AGACACGCTGGAATTTAATACAACGTACAAATGGTTGTTTGGCAAGTCCA
ACACACCAGCCACATGGCGTCAAGCGCTCAGTAAAATCCGCATTTGGTGT
CTGCGAAGAGGAAGTCTCTGCCCGGCAGCGGTTTTGGCCACATCGGTGCT
TGTTCAGGCGCACTTGGAGGACCAGGAGGGCAGCGCCAAAATACAGGACA
CCTATGCCAGTGCCTTTACACGATTCTACAACTTTATGTCCTCCATTATC
CAGGGACACAACATGTCCAGCATGTATGAAACGGCCAAGGAACTGGGCCT
CCAGTCGTTCATCGTTGATCTGCGCCACTTGTGCGCCCATGGACAGGAGC
TGCCGCCTGTGGAGGTGCTGAGAAACACCTCGAATCATTGTCTGGAGTGG
CTGCGCACCTACTACTGGTTGCCACACATGGAAACCATGTCCAATTTGGA
TGCTGGCAAACTGCATCGCAAGGACAAGCTTAAGTTTGAAAAGGCTGTGA
CAGATCTTCTGGAGATCTACGATCTAACCCTGGAGTGCCATATCAAGGGG
GCTGAGAAACTAAAGGCCATTAGCAAGCTAAAATCCAGTGGTGAATTCAA
TAAGATACGAGTCTACTCCTCCAGCAAGAAGGCGAAGACATCGAAAGAAA
TTCTGAGTGCTGTGTTAGGTGATCTAAGTGCGTTGGTCAAAAAGGAGTCA
TCATCGATGAAGGATCTGCTGGACATATATACAAAATGCCTGCTTAAAAT
GAAATACTTCCTTGG

BO10464.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32075-PA 1626 CG32075-RA 1..899 17..915 4495 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32075-RB 1751 CG32075-RB 77..976 16..915 4500 100 Plus
CG32075-RA 1955 CG32075-RA 281..1180 16..915 4500 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11063703..11064461 915..157 3795 100 Minus
3L 28110227 3L 11064520..11064661 157..16 710 100 Minus
Blast to na_te.dros performed on 2015-02-12 19:08:00 has no hits.

BO10464.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:48 Download gff for BO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-PA 1..899 17..915 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:03 Download gff for BO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-PA 1..899 17..915 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:40:51 Download gff for BO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 281..1180 16..915 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:41:48 Download gff for BO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 281..1180 16..915 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:41:48 Download gff for BO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11063703..11064461 157..915 100 <- Minus
3L 11064521..11064661 16..156 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:40:51 Download gff for BO10464.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11056803..11057561 157..915 100 <- Minus
arm_3L 11057621..11057761 16..156 100   Minus

BO10464.complete Sequence

1657 bp (1657 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631775

> BO10464.complete
GAAGTTATCAGTCGACATGGCTGTTGCAAAGAAGGAAAAATTTGAGGCAA
AAAAGAAAAGCCCTGAAAAGGGAAAACAGCAGAAAGCCAAAGTTGTTCCT
GTCACACCGCCACCAAATGTAAAACAACGAACTGTGGTCACTCCTTGGCG
AGACACGCTGGAATTTAATACAACGTACAAATGGTTGTTTGGCAAGTCCA
ACACACCAGCCACATGGCGTCAAGCGCTCAGTAAAATCCGCATTTGGTGT
CTGCGAAGAGGAAGTCTCTGCCCGGCAGCGGTTTTGGCCACATCGGTGCT
TGTTCAGGCGCACTTGGAGGACCAGGAGGGCAGCGCCAAAATACAGGACA
CCTATGCCAGTGCCTTTACACGATTCTACAACTTTATGTCCTCCATTATC
CAGGGACACAACATGTCCAGCATGTATGAAACGGCCAAGGAACTGGGCCT
CCAGTCGTTCATCGTTGATCTGCGCCACTTGTGCGCCCATGGACAGGAGC
TGCCGCCTGTGGAGGTGCTGAGAAACACCTCGAATCATTGTCTGGAGTGG
CTGCGCACCTACTACTGGTTGCCACACATGGAAACCATGTCCAATTTGGA
TGCTGGCAAACTGCATCGCAAGGACAAGCTTAAGTTTGAAAAGGCTGTGA
CAGATCTTCTGGAGATCTACGATCTAACCCTGGAGTGCCATATCAAGGGG
GCTGAGAAACTAAAGGCCATTAGCAAGCTAAAATCCAGTGGTGAATTCAA
TAAGATACGAGTCTACTCCTCCAGCAAGAAGGCGAAGACATCGAAAGAAA
TTCTGAGTGCTGTGTTAGGTGATCTAAGTGCGTTGGTCAAAAAGGAGTCA
TCATCGATGAAGGATCTGCTGGACATATATACAAAATGCCTGCTTAAAAT
GAAATACTTCCTTGGCGTTGGCTTGGAAATCGACGACAACGAGGATGTCA
TCATTGCAGCCACACAGGGACTCTTCCGTCTATTGGCCGTGCAGGGATAT
ATCGAGAAGGTTTTTTTGGCCCTAGTTCAACTGAGTGAAAACCAAAACGA
GTCGGAGCAAAGGCGTCTGGGAGCCAGCTACTGGGCAAAGAAAATGTTGG
AAACATTTGGGATGCTGTTCCGTATGAAGCGCATGTACAAAGCCGAACTG
GATTTGAACGATAAACTAAAACCAGCGGACTTTGCCACCCTAAACACGGA
TAAAATTTCTAAGACAATGCGCAGTCTGTTAGTACACTCAAATGCCGATC
TCTCGGTTACCCTTATTTTTGGCGACAATCCCAAAAAGTCCAGGTCTTTG
ATTTTTGATCGTGATTTTATTATGCAGCGTGTTGATGCATTTAGCAATTA
CTCAGCGCCCATTCTAAAAGGATTATTACCGCTCGCAGATCCTCCATACA
CCAAGACGCAAATTGAGGATTTAACTAAACTCTGCGATGCACAGCTTGAA
GAATTTTATGAAGAGGAAGCTATGGAAGAAGATAGCTCTTCAGAGGAGAG
CAACAATCTAGACCGTTTGGAACGATTTTTGGAACAAGCAGCTCAAAGCA
AAGAGCATACATCAGACTGGGGAGTTTGGAAATTAGACAAGCATACCGAT
TGGCCCAAATGTGCATTGGGTGTGCTCCCTTGGGCTCAAGCAAGCTTTCT
AGACCAT

BO10464.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:11:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG32075-RB 1626 CG32075-PB 1..1623 17..1639 8115 100 Plus
CG32075-RA 1626 CG32075-PA 1..1623 17..1639 8115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG32075-RB 1751 CG32075-RB 77..1700 16..1639 8120 100 Plus
CG32075-RA 1955 CG32075-RA 281..1904 16..1639 8120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11063462..11064461 1156..157 5000 100 Minus
3L 28110227 3L 11062903..11063124 1592..1371 1110 100 Minus
3L 28110227 3L 11063187..11063402 1371..1156 1080 100 Minus
3L 28110227 3L 11064520..11064661 157..16 710 100 Minus
3L 28110227 3L 11062777..11062823 1639..1593 235 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:11:15 has no hits.

BO10464.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:57:38 Download gff for BO10464.complete
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 1..1626 17..1643 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:15:05 Download gff for BO10464.complete
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 277..1903 16..1643 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:29:33 Download gff for BO10464.complete
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 282..1904 17..1641 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:57:38 Download gff for BO10464.complete
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 277..1903 16..1643 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:12:46 Download gff for BO10464.complete
Subject Subject Range Query Range Percent Splice Strand
CG32075-RA 282..1904 17..1641 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:12:46 Download gff for BO10464.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11062775..11062823 1593..1641 95 <- Minus
3L 11062903..11063123 1372..1592 100 <- Minus
3L 11063187..11063401 1157..1371 100 <- Minus
3L 11063462..11064461 157..1156 100 <- Minus
3L 11064521..11064660 17..156 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:29:33 Download gff for BO10464.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11055875..11055923 1593..1641 95 <- Minus
arm_3L 11056003..11056223 1372..1592 100 <- Minus
arm_3L 11056287..11056501 1157..1371 100 <- Minus
arm_3L 11056562..11057561 157..1156 100 <- Minus
arm_3L 11057621..11057760 17..156 100   Minus

BO10464.pep Sequence

Translation from 16 to 1657

> BO10464.pep
MAVAKKEKFEAKKKSPEKGKQQKAKVVPVTPPPNVKQRTVVTPWRDTLEF
NTTYKWLFGKSNTPATWRQALSKIRIWCLRRGSLCPAAVLATSVLVQAHL
EDQEGSAKIQDTYASAFTRFYNFMSSIIQGHNMSSMYETAKELGLQSFIV
DLRHLCAHGQELPPVEVLRNTSNHCLEWLRTYYWLPHMETMSNLDAGKLH
RKDKLKFEKAVTDLLEIYDLTLECHIKGAEKLKAISKLKSSGEFNKIRVY
SSSKKAKTSKEILSAVLGDLSALVKKESSSMKDLLDIYTKCLLKMKYFLG
VGLEIDDNEDVIIAATQGLFRLLAVQGYIEKVFLALVQLSENQNESEQRR
LGASYWAKKMLETFGMLFRMKRMYKAELDLNDKLKPADFATLNTDKISKT
MRSLLVHSNADLSVTLIFGDNPKKSRSLIFDRDFIMQRVDAFSNYSAPIL
KGLLPLADPPYTKTQIEDLTKLCDAQLEEFYEEEAMEEDSSSEESNNLDR
LERFLEQAAQSKEHTSDWGVWKLDKHTDWPKCALGVLPWAQASFLDH

BO10464.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG32075-PB 541 CG32075-PB 1..541 1..541 2798 100 Plus
CG32075-PA 541 CG32075-PA 1..541 1..541 2798 100 Plus