Clone BO10469 Report

Search the DGRC for BO10469

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:104
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG15818-RA
Protein status:BO10469.pep: validated full length
Sequenced Size:883

Clone Sequence Records

BO10469.3prime Sequence

881 bp (803 high quality bases) assembled on 2006-04-19

> BO10469.3prime
ATGGTCTAGAAAGCTTGCAACATCACTGTCTGATTGGCAAATGAAATGCA
TAACGTCAGTGGTACAGGACAGAACGATCATAATGTTTTCGTGCCCAAAA
ACGTAGGCGCAGTGCTGGGTAGGATTATTGTATTTGGGTTCATTTTTGCG
CCACTTGAAGTAGGTAGCTCGTTTGCCGGAGGCCAAGGATATAAACTCGC
CCTGCTTGGCCAGATCGTTGACACCCAGCCAGTAGTTCGCCTTGTTCAAT
TGGCCCACTATGGCGTTGTATTCCTCGGCATTTTGGAATGCTGCGAGGTG
GCCGCCCATTTCAATGCACCTCTGCTCGGCGGTCCTCCAGTTCACCTGTA
AGTTGTGTTCGATGTAGAAATATCTCGATCCTATCTGTTGATATCTCTGC
AGCACGAGTTTCCTTTCGATATCGGATAGAGTCTTCTGGATGGCTGTCAA
CTGGTTTTCCGTCCTCTTCTGTCCATCTTTCAACTGATTACTCAGCGCTG
TCTGATTGCCTTCGATATCCTTTAGTTTTTGCTCAAGGTCCTCGGTTTTG
ATTGCCTTCGAAATGTTGTTCACAAGGAATGCTTGCTGGGCTTCTATTTG
GATTTGTGTCGCCGTCAACTGGTCTTCGATCTTATCCAGTTTCGCGACGC
TTCCATTAAGTTTCACCTCGCAGGCTCCCCAGTCCTGTTGCTCCTTCGAA
AGGTGATCGATGACCGGCTGCAGTGCGGATACGCAATATTCACTGCACTG
ATTGGGAGGATCTGATAATAGACACACATAGCGCCTGCCCTCCTGGGCTT
CTATCAGGGATCCGTAAGGATACAGCAATAGAAATGCGCACAAAATAATT
CTCGTAGAGCTAAACATGTCGACTGATAACT

BO10469.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-PA 852 CG15818-RA 1..849 867..19 4245 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 16:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 1321 CG15818-RA 47..895 867..19 4245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 16:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7410955..7411803 867..19 4245 100 Minus
2L 23513712 2L 7399552..7399667 774..659 220 79.3 Minus
Blast to na_te.dros performed on 2015-02-06 16:59:16 has no hits.

BO10469.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:56 Download gff for BO10469.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..852 18..867 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:15 Download gff for BO10469.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..852 18..867 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:28:50 Download gff for BO10469.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..901 10..867 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:23:46 Download gff for BO10469.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..901 10..867 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:23:46 Download gff for BO10469.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 7410955..7411801 21..867 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:28:50 Download gff for BO10469.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7410955..7411801 21..867 100 <- Minus

BO10469.5prime Sequence

864 bp (835 high quality bases) assembled on 2006-04-19

> BO10469.5prime
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGT

BO10469.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-PA 852 CG15818-RA 1..848 17..864 4240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 1321 CG15818-RA 47..894 17..864 4240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:35:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7410955..7411802 17..864 4240 100 Plus
2L 23513712 2L 7399552..7399667 110..225 220 79.3 Plus
Blast to na_te.dros performed on 2015-02-13 00:35:27 has no hits.

BO10469.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:58 Download gff for BO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..848 17..864 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:17 Download gff for BO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-PA 1..848 17..864 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:00:26 Download gff for BO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..894 17..864 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:46:59 Download gff for BO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 47..894 17..864 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:46:59 Download gff for BO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 7410955..7411802 17..864 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:00:26 Download gff for BO10469.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7410955..7411802 17..864 100   Plus

BO10469.complete Sequence

883 bp (883 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631778

> BO10469.complete
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGTTGCAAGCTTTCTAGACCAT

BO10469.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 852 CG15818-PA 1..849 17..865 4245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:19:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-RA 1321 CG15818-RA 47..895 17..865 4245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7410955..7411803 17..865 4245 100 Plus
2L 23513712 2L 7399552..7399667 110..225 220 79.3 Plus
Blast to na_te.dros performed on 2014-11-28 00:19:35 has no hits.

BO10469.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:28 Download gff for BO10469.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 1..852 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:59 Download gff for BO10469.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 22..876 17..874 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:25 Download gff for BO10469.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 53..895 23..867 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:29 Download gff for BO10469.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 22..876 17..874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:59 Download gff for BO10469.complete
Subject Subject Range Query Range Percent Splice Strand
CG15818-RA 53..895 23..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:59 Download gff for BO10469.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7410961..7411803 23..867 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:25 Download gff for BO10469.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7410961..7411803 23..867 99   Plus

BO10469.pep Sequence

Translation from 16 to 883

> BO10469.pep
MFSSTRIILCAFLLLYPYGSLIEAQEGRRYVCLLSDPPNQCSEYCVSALQ
PVIDHLSKEQQDWGACEVKLNGSVAKLDKIEDQLTATQIQIEAQQAFLVN
NISKAIKTEDLEQKLKDIEGNQTALSNQLKDGQKRTENQLTAIQKTLSDI
ERKLVLQRYQQIGSRYFYIEHNLQVNWRTAEQRCIEMGGHLAAFQNAEEY
NAIVGQLNKANYWLGVNDLAKQGEFISLASGKRATYFKWRKNEPKYNNPT
QHCAYVFGHENIMIVLSCTTDVMHFICQSDSDVASFLDH

BO10469.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15818-PA 283 CG15818-PA 1..283 1..283 1483 100 Plus
lectin-28C-PC 265 CG7106-PC 1..265 1..283 445 36.8 Plus
lectin-28C-PB 265 CG7106-PB 1..265 1..283 445 36.8 Plus
CG15358-PC 229 CG15358-PC 4..226 31..282 397 34.4 Plus
CG15358-PB 229 CG15358-PB 4..226 31..282 397 34.4 Plus