Clone Sequence Records
BO10469.3prime Sequence
881 bp (803 high quality bases) assembled on 2006-04-19
> BO10469.3prime
ATGGTCTAGAAAGCTTGCAACATCACTGTCTGATTGGCAAATGAAATGCA
TAACGTCAGTGGTACAGGACAGAACGATCATAATGTTTTCGTGCCCAAAA
ACGTAGGCGCAGTGCTGGGTAGGATTATTGTATTTGGGTTCATTTTTGCG
CCACTTGAAGTAGGTAGCTCGTTTGCCGGAGGCCAAGGATATAAACTCGC
CCTGCTTGGCCAGATCGTTGACACCCAGCCAGTAGTTCGCCTTGTTCAAT
TGGCCCACTATGGCGTTGTATTCCTCGGCATTTTGGAATGCTGCGAGGTG
GCCGCCCATTTCAATGCACCTCTGCTCGGCGGTCCTCCAGTTCACCTGTA
AGTTGTGTTCGATGTAGAAATATCTCGATCCTATCTGTTGATATCTCTGC
AGCACGAGTTTCCTTTCGATATCGGATAGAGTCTTCTGGATGGCTGTCAA
CTGGTTTTCCGTCCTCTTCTGTCCATCTTTCAACTGATTACTCAGCGCTG
TCTGATTGCCTTCGATATCCTTTAGTTTTTGCTCAAGGTCCTCGGTTTTG
ATTGCCTTCGAAATGTTGTTCACAAGGAATGCTTGCTGGGCTTCTATTTG
GATTTGTGTCGCCGTCAACTGGTCTTCGATCTTATCCAGTTTCGCGACGC
TTCCATTAAGTTTCACCTCGCAGGCTCCCCAGTCCTGTTGCTCCTTCGAA
AGGTGATCGATGACCGGCTGCAGTGCGGATACGCAATATTCACTGCACTG
ATTGGGAGGATCTGATAATAGACACACATAGCGCCTGCCCTCCTGGGCTT
CTATCAGGGATCCGTAAGGATACAGCAATAGAAATGCGCACAAAATAATT
CTCGTAGAGCTAAACATGTCGACTGATAACT
BO10469.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-PA | 852 | CG15818-RA | 1..849 | 867..19 | 4245 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 16:59:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 1321 | CG15818-RA | 47..895 | 867..19 | 4245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 16:59:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7410955..7411803 | 867..19 | 4245 | 100 | Minus |
2L | 23513712 | 2L | 7399552..7399667 | 774..659 | 220 | 79.3 | Minus |
Blast to na_te.dros performed on 2015-02-06 16:59:16 has no hits.
BO10469.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:56 Download gff for
BO10469.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..852 | 18..867 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:15 Download gff for
BO10469.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..852 | 18..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:28:50 Download gff for
BO10469.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..901 | 10..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:23:46 Download gff for
BO10469.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..901 | 10..867 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:23:46 Download gff for
BO10469.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7410955..7411801 | 21..867 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:28:50 Download gff for
BO10469.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7410955..7411801 | 21..867 | 100 | <- | Minus |
BO10469.5prime Sequence
864 bp (835 high quality bases) assembled on 2006-04-19
> BO10469.5prime
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGT
BO10469.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-PA | 852 | CG15818-RA | 1..848 | 17..864 | 4240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:35:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 1321 | CG15818-RA | 47..894 | 17..864 | 4240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:35:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7410955..7411802 | 17..864 | 4240 | 100 | Plus |
2L | 23513712 | 2L | 7399552..7399667 | 110..225 | 220 | 79.3 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:35:27 has no hits.
BO10469.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:40:58 Download gff for
BO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..848 | 17..864 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:17 Download gff for
BO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-PA | 1..848 | 17..864 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:00:26 Download gff for
BO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..894 | 17..864 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:46:59 Download gff for
BO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 47..894 | 17..864 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:46:59 Download gff for
BO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7410955..7411802 | 17..864 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:00:26 Download gff for
BO10469.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7410955..7411802 | 17..864 | 100 | | Plus |
BO10469.complete Sequence
883 bp (883 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ631778
> BO10469.complete
GAAGTTATCAGTCGACATGTTTAGCTCTACGAGAATTATTTTGTGCGCAT
TTCTATTGCTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGG
CGCTATGTGTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTG
CGTATCCGCACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGG
ACTGGGGAGCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGAT
AAGATCGAAGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCA
AGCATTCCTTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTG
AGCAAAAACTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAG
TTGAAAGATGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAA
GACTCTATCCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGA
TAGGATCGAGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGG
ACCGCCGAGCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCA
AAATGCCGAGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACT
ACTGGCTGGGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTG
GCCTCCGGCAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAA
ATACAATAATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACA
TTATGATCGTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAA
TCAGACAGTGATGTTGCAAGCTTTCTAGACCAT
BO10469.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:19:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 852 | CG15818-PA | 1..849 | 17..865 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:19:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-RA | 1321 | CG15818-RA | 47..895 | 17..865 | 4245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:19:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7410955..7411803 | 17..865 | 4245 | 100 | Plus |
2L | 23513712 | 2L | 7399552..7399667 | 110..225 | 220 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:19:35 has no hits.
BO10469.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:28 Download gff for
BO10469.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 1..852 | 17..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:59 Download gff for
BO10469.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 22..876 | 17..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:25 Download gff for
BO10469.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 53..895 | 23..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:29 Download gff for
BO10469.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 22..876 | 17..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:59 Download gff for
BO10469.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15818-RA | 53..895 | 23..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:59 Download gff for
BO10469.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7410961..7411803 | 23..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:25 Download gff for
BO10469.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7410961..7411803 | 23..867 | 99 | | Plus |
BO10469.pep Sequence
Translation from 16 to 883
> BO10469.pep
MFSSTRIILCAFLLLYPYGSLIEAQEGRRYVCLLSDPPNQCSEYCVSALQ
PVIDHLSKEQQDWGACEVKLNGSVAKLDKIEDQLTATQIQIEAQQAFLVN
NISKAIKTEDLEQKLKDIEGNQTALSNQLKDGQKRTENQLTAIQKTLSDI
ERKLVLQRYQQIGSRYFYIEHNLQVNWRTAEQRCIEMGGHLAAFQNAEEY
NAIVGQLNKANYWLGVNDLAKQGEFISLASGKRATYFKWRKNEPKYNNPT
QHCAYVFGHENIMIVLSCTTDVMHFICQSDSDVASFLDH
BO10469.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:30:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15818-PA | 283 | CG15818-PA | 1..283 | 1..283 | 1483 | 100 | Plus |
lectin-28C-PC | 265 | CG7106-PC | 1..265 | 1..283 | 445 | 36.8 | Plus |
lectin-28C-PB | 265 | CG7106-PB | 1..265 | 1..283 | 445 | 36.8 | Plus |
CG15358-PC | 229 | CG15358-PC | 4..226 | 31..282 | 397 | 34.4 | Plus |
CG15358-PB | 229 | CG15358-PB | 4..226 | 31..282 | 397 | 34.4 | Plus |