Clone Sequence Records
BO10482.3prime Sequence
833 bp (775 high quality bases) assembled on 2006-04-19
> BO10482.3prime
ATGGTCTAGAAAGCTTGCGTAAAAGAATAGCAGCCGTTCCTGGGCAGAGG
CGGAAAGGAGGCGCCACGATCGCTTGATGCTGACATACTGTATTAAAGCG
CGTATGCTGATCAGGAAGCCAAAGGCACAGATCAGCCACCAGAGCCAGGA
GTTTTCGTGCGAGGCCAAGTCCGTCGAGTGCTTCACGATCAGCGTCCATT
TAGCCAGCGACAATCCGAATCCCGACAATGCTCCATATCGGGCGGCGATT
GTGTGACAGAAACAGGTGAGCATCAGGAAGCCGATCCAGTTAAACAAAAA
GGCCACAATGAAGGCCGTGATGAACATGATGTCCGTGCCGAGCAAGTTGT
CGGTGGTGGACAGACTATTTTCCGGATCGCTGGCATCGATGGCGATGAAC
GTGAGTGCCGGCTGGGCAGATCGCACAGCAGCGGCTCCATCGCGCAGCGG
ATTTGGCGGCAGTAGCGGATTCGGCGGCGGCGGTAGCTGCTGCGAGGAGG
GTAAAGTCAAAAAGGCGGGCGGCAGCTCTCCGTTCAGCGACTTTTCCATT
TGAACCTCCTCGTACGTGGGCAACTTCCCGTGTATTTCTGGCGGCAGTTG
TGCATTCATAAGGTCCGCCTGGCTCGGCAGCTGCACTTGCATCTGTATCG
GGATCTGACTGGGATCGGGTGTGGCCAAGGCCAGCGGTGGCATCTGAGCC
GGCAGTGCTACCTGCTGGCCATGGCCAACGTTCGCCTCGTACGGTGGCGG
AGCACTGAAGTCCGCCTTTGGCGGTCCCAACTGATCATCCCCGGGAGACG
GCTGGTTGTTGTGCGGCATGTCGACTGATAACT
BO10482.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32177-PA | 804 | CG32177-RA | 1..801 | 819..19 | 4005 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:46:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1092 | 820..19 | 4010 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648444..17649245 | 19..820 | 4010 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:46:00 has no hits.
BO10482.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:41:23 Download gff for
BO10482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 18..819 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:51 Download gff for
BO10482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 18..819 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:18:53 Download gff for
BO10482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 19..826 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:51:44 Download gff for
BO10482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 19..826 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:51:44 Download gff for
BO10482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648444..17649252 | 19..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:18:53 Download gff for
BO10482.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641544..17642352 | 19..831 | 99 | | Plus |
BO10482.5prime Sequence
833 bp (779 high quality bases) assembled on 2006-04-19
> BO10482.5prime
GAAGTTATCAGTCGACATGCCGCACAACAACCAGCCGTCTCCCGGGGATG
ATCAGTTGGGACCGCCAAAGGCGGACTTCAGTGCTCCGCCACCGTACGAG
GCGAACGTTGGCCATGGCCAGCAGGTAGCACTGCCGGCTCAGATGCCACC
GCTGGCCTTGGCCACACCCGATCCCAGTCAGATCCCGATACAGATGCAAG
TGCAGCTGCCGAGCCAGGCGGACCTTATGAATGCACAACTGCCGCCAGAA
ATACACGGGAAGTTGCCCACGTACGAGGAGGTTCAAATGGAAAAGTCGCT
GAACGGAGAGCTGCCGCCCGCCTTTTTGACTTTACCCTCCTCGCAGCAGC
TACCGCCGCCGCCGAATCCGCTACTGCCGCCAAATCCGCTGCGCGATGGA
GCCGCTGCTGTGCGATCTGCCCAGCCGGCACTCACGTTCATCGCCATCGA
TGCCAGCGATCCGGAAAATAGTCTGTCCACCACCGACAACTTGCTCGGCA
CGGACATCATGTTCATCACGGCCTTCATTGTGGCCTTTTTGTTTAACTGG
ATCGGCTTCCTGATGCTCACCTGTTTCTGTCACACAATCGCCGCCCGATA
TGGAGCATTGTCGGGATTCGGATTGTCGCTGGCTAAATGGACGCTGATCG
TGAAGCACTCGACGGACTTGGCCTCGCACGAAAACTCCTGGCTCTGGTGG
CTGATCTGTGCCTTTGGCTTCCTGATCAGCATACGCGCTTTAATACAGTA
TGTCAGCATCAAGCGATCGTGGCGCCTCCTTTTCGCCTCTGCCCAGGAAC
GGCTGCTATTCTTTTACGCAAGCTTTCTAGACC
BO10482.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32177-PA | 804 | CG32177-RA | 1..801 | 17..817 | 3980 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:25:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1092 | 16..817 | 3995 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:25:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648444..17649245 | 817..16 | 3995 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:25:05 has no hits.
BO10482.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:41:24 Download gff for
BO10482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:52 Download gff for
BO10482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-PA | 1..804 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:44:36 Download gff for
BO10482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 10..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:00:31 Download gff for
BO10482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 288..1092 | 10..817 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:00:31 Download gff for
BO10482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648444..17649252 | 5..817 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:44:36 Download gff for
BO10482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641544..17642352 | 5..817 | 99 | | Minus |
BO10482.complete Sequence
835 bp (835 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ631788
> BO10482.complete
GAAGTTATCAGTCGACATGCCGCACAACAACCAGCCGTCTCCCGGGGATG
ATCAGTTGGGACCGCCAAAGGCGGACTTCAGTGCTCCGCCACCGTACGAG
GCGAACGTTGGCCATGGCCAGCAGGTAGCACTGCCGGCTCAGATGCCACC
GCTGGCCTTGGCCACACCCGATCCCAGTCAGATCCCGATACAGATGCAAG
TGCAGCTGCCGAGCCAGGCGGACCTTATGAATGCACAACTGCCGCCAGAA
ATACACGGGAAGTTGCCCACGTACGAGGAGGTTCAAATGGAAAAGTCGCT
GAACGGAGAGCTGCCGCCCGCCTTTTTGACTTTACCCTCCTCGCAGCAGC
TACCGCCGCCGCCGAATCCGCTACTGCCGCCAAATCCGCTGCGCGATGGA
GCCGCTGCTGTGCGATCTGCCCAGCCGGCACTCACGTTCATCGCCATCGA
TGCCAGCGATCCGGAAAATAGTCTGTCCACCACCGACAACTTGCTCGGCA
CGGACATCATGTTCATCACGGCCTTCATTGTGGCCTTTTTGTTTAACTGG
ATCGGCTTCCTGATGCTCACCTGTTTCTGTCACACAATCGCCGCCCGATA
TGGAGCATTGTCGGGATTCGGATTGTCGCTGGCTAAATGGACGCTGATCG
TGAAGCACTCGACGGACTTGGCCTCGCACGAAAACTCCTGGCTCTGGTGG
CTGATCTGTGCCTTTGGCTTCCTGATCAGCATACGCGCTTTAATACAGTA
TGTCAGCATCAAGCGATCGTGGCGCCTCCTTTCCGCCTCTGCCCAGGAAC
GGCTGCTATTCTTTTACGCAAGCTTTCTAGACCAT
BO10482.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:49:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 804 | CG32177-PA | 1..801 | 17..817 | 4005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:49:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-RA | 2094 | CG32177-RA | 291..1092 | 16..817 | 4010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:49:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17648444..17649245 | 817..16 | 4010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:49:38 has no hits.
BO10482.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:21 Download gff for
BO10482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 1..804 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:49 Download gff for
BO10482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 284..1088 | 10..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:24 Download gff for
BO10482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 292..1092 | 17..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:21 Download gff for
BO10482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32177-RA | 284..1088 | 10..817 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:05:28 Download gff for
BO10482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ndfip-RA | 292..1092 | 17..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:05:28 Download gff for
BO10482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17648442..17649244 | 17..819 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:24 Download gff for
BO10482.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17641542..17642344 | 17..819 | 99 | | Minus |
BO10482.pep Sequence
Translation from 16 to 835
> BO10482.pep
MPHNNQPSPGDDQLGPPKADFSAPPPYEANVGHGQQVALPAQMPPLALAT
PDPSQIPIQMQVQLPSQADLMNAQLPPEIHGKLPTYEEVQMEKSLNGELP
PAFLTLPSSQQLPPPPNPLLPPNPLRDGAAAVRSAQPALTFIAIDASDPE
NSLSTTDNLLGTDIMFITAFIVAFLFNWIGFLMLTCFCHTIAARYGALSG
FGLSLAKWTLIVKHSTDLASHENSWLWWLICAFGFLISIRALIQYVSIKR
SWRLLSASAQERLLFFYASFLDH
BO10482.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:30:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ndfip-PA | 267 | CG32177-PA | 1..267 | 1..267 | 1413 | 100 | Plus |
