Clone Sequence Records
BO10483.3prime Sequence
884 bp (758 high quality bases) assembled on 2006-04-19
> BO10483.3prime
ATGGTCTAGAAAGCTTGCAGAACAGCTGCAACCCTCGACAGACATATTTG
GTATAACACTTAAAACCAGATTATGGTTATCGTCAAAATATAACAAACTT
AAGGAACTCATTTTTGTCGGCGAGCAACACGGTGTGGCCGATGTCGTTAA
GGCTGCTAAATGTGTATGGGGATATTGCTCTAGGTAACCAACTTTGCAGT
CACCACTGCAGAAGTATGCGTCAAAGGACGTTGGTGCTACAACGAAATGC
CATCCAAAGCTGGTGAAATTAACTTTGAGGGGATATCGACAACAGCGCAT
GTCATGATCATTTTCTGTGCAGTCCATATATACGCTGCGCTTTCTTCGAT
GCTTTTTTTGCGACCCAATTTCTATGTGAACAGTCAATGGATTTTTCGAT
GTGTTGTCTGTGGTCACCACTAATGACTTCATCCAGGTTTCTGCGCCCTT
TATTAGAATTTCTTGCGTCATATTAGACCCAAGATTACCAAGCAGAGACT
TTAAGTCCACAGCAACCCATTGTCCAAGTCCTGACGGAATACTATGTCGA
AACTCAAACATTTTGACTTTAGGATTAAAGCTTGTTGTATTTGCAACCCT
AATAGCGCGGTGAATAGTCACAACAATATCTTTACGTGGCTGTTTTTTAA
TTTCTTCAAGAAGTCCAGGTTGATGAGCACTTATCCAATCCCAACCACGT
AAATATAGATGAAGGGTAGCGTAAGACAAGTCTGAGTAGCTACTGTCAAT
TTGAAACCGAAAAACATCGACCTTGCGATTGTGCCGAACATGAGGTTGAA
TTTCCTCGGGAAATATGTATATACTGCTGATGTGAGACAAATACTCTCGT
ACTCCTCATCGTTGGTATTAATAGGAATGTCCGA
BO10483.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1838-PA | 1797 | myoglianin-RA | 972..1794 | 841..19 | 4115 | 100 | Minus |
| CG1838-PB | 1797 | myoglianin-RB | 972..1794 | 841..19 | 4115 | 100 | Minus |
| CG1838-PC | 1797 | myoglianin-RC | 972..1794 | 841..19 | 4115 | 100 | Minus |
| CG1838-PD | 1797 | myoglianin-RD | 972..1794 | 841..19 | 4115 | 100 | Minus |
| CG1838-PA | 1797 | myoglianin-RA | 928..973 | 884..839 | 230 | 100 | Minus |
| CG1838-PB | 1797 | myoglianin-RB | 928..973 | 884..839 | 230 | 100 | Minus |
| CG1838-PC | 1797 | myoglianin-RC | 928..973 | 884..839 | 230 | 100 | Minus |
| CG1838-PD | 1797 | myoglianin-RD | 928..973 | 884..839 | 230 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:54:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 1438..2304 | 884..19 | 4310 | 99.9 | Minus |
| myo-RC | 3056 | CG1838-RC | 1797..2663 | 884..19 | 4310 | 99.9 | Minus |
| myo-RA | 2896 | CG1838-RA | 1314..2180 | 884..19 | 4310 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 692425..692844 | 385..804 | 2100 | 100 | Plus |
| 4 | 1348131 | 4 | 691994..692360 | 19..385 | 1835 | 100 | Plus |
| 4 | 1348131 | 4 | 693381..693462 | 804..884 | 360 | 98.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 19:54:42 has no hits.
BO10483.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:41:25 Download gff for
BO10483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PA | 929..1797 | 18..883 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:54 Download gff for
BO10483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PC | 929..1797 | 18..883 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:37:12 Download gff for
BO10483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 1315..2184 | 13..883 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:34:39 Download gff for
BO10483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 1315..2184 | 13..883 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:34:39 Download gff for
BO10483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 691990..692359 | 13..384 | 99 | <- | Plus |
| 4 | 692425..692843 | 385..803 | 100 | <- | Plus |
| 4 | 693381..693461 | 804..883 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:37:12 Download gff for
BO10483.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 712616..712985 | 13..384 | 99 | <- | Plus |
| arm_4 | 713051..713469 | 385..803 | 100 | <- | Plus |
| arm_4 | 714007..714087 | 804..883 | 98 | | Plus |
BO10483.5prime Sequence
905 bp (876 high quality bases) assembled on 2006-04-19
> BO10483.5prime
GAAGTTATCAGTCGACATGCTGGCCAACTCATGCTGCGGTTGGAGAAAAT
ATAAAACCCATGATCAGCATCATAGAACCCTAAAGAAAAAAACTCGACAG
AACACATCAGATACAACAGTTCACATAGAAGTGAACTCCAACGAAATCCA
GTTTCCAGGTTCTTACAGATTTAATCTTGACTCAAAAAAAATAAATATCG
GGCGAATGAATATTCTTGGACATAAGAGAGGTAATTTCCGTGTAACTCGA
TATGTCACGGTCACCGTACTCTTAATTTTATCGACTGCAGTCAATGCTTA
TGCTCAGCCAGAAAATAAAAGCTTCAGTAATTCTTCCAACAACGATAGTC
CGGAAATGGTTATGTTGAGTAACGAAACAAACAATAGTGCAAAAGTACTA
TCAGAAAAAAATGGTTCTTCTTCAATATCGGCGGATGATAAAATAAATGA
AAATATGGGAATATTCCAAATGAAAGTACAAAGTAAACCGGGGAAAAAAA
GTACCCCTTTAGCAAAGGTATCAGAGCATGGAGATTTATCAAGAGTTCAA
AGTGTATCTTTGTATCGCAATACCTTAATAAATATAGAAAGTATGCTACA
GCGTCAGTTGCGTGAGAAAGCCAAAGTGGATAGTATAGAATCGATTAAAA
TGCACATACTTATGCGCTTGAATTTAAAAAAACTTCCCAATATAACAAAA
CCAATTTCAGTACCACAAAATATAATAGATAACTTTTATAGAGATTATAA
TGCATCTTCAAAAACTACTGTTTGGAATCGCATGGAAAGCATTGACGAAT
CTCATTTGTCTATAAATGACACTTATGGCGACCACATAATGACTGATTTT
TTTGATGAAAGTTCATCCTCCCAAATGCAGGGAGATGATGCTAACACTGT
TTATG
BO10483.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1838-PA | 1797 | myoglianin-RA | 1..885 | 17..901 | 4425 | 100 | Plus |
| CG1838-PB | 1797 | myoglianin-RB | 1..885 | 17..901 | 4425 | 100 | Plus |
| CG1838-PC | 1797 | myoglianin-RC | 1..885 | 17..901 | 4425 | 100 | Plus |
| CG1838-PD | 1797 | myoglianin-RD | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 510..1399 | 16..905 | 4435 | 99.9 | Plus |
| myo-RC | 3056 | CG1838-RC | 869..1758 | 16..905 | 4435 | 99.9 | Plus |
| myo-RA | 2896 | CG1838-RA | 386..1275 | 16..905 | 4435 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:12:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 693501..694390 | 905..16 | 4435 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 12:12:07 has no hits.
BO10483.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:41:26 Download gff for
BO10483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PD | 1..889 | 17..905 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:55:55 Download gff for
BO10483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1838-PD | 1..889 | 17..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:27:15 Download gff for
BO10483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1275 | 16..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:26:06 Download gff for
BO10483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1275 | 16..905 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:26:06 Download gff for
BO10483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 693501..694390 | 16..905 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:27:15 Download gff for
BO10483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 714127..715016 | 16..905 | 99 | | Minus |
BO10483.complete Sequence
1828 bp assembled on 2008-01-16
GenBank Submission: FJ631789
> BO10483.complete
GAAGTTATCAGTCGACATGCTGGCCAACTCATGCTGCGGTTGGAGAAAAT
ATAAAACCCATGATCAGCATCATAGAACCCTAAAGAAAAAAACTCGACAG
AACACATCAGATACAACAGTTCACATAGAAGTGAACTCCAACGAAATCCA
GTTTCCAGGTTCTTACAGATTTAATCTTGACTCAAAAAAAATAAATATCG
GGCGAATGAATATTCTTGGACATAAGAGAGGTAATTTCCGTGTAACTCGA
TATGTCACGGTCACCGTACTCTTAATTTTATCGACTGCAGTCAATGCTTA
TGCTCAGCCAGAAAATAAAAGCTTCAGTAATTCTTCCAACAACGATAGTC
CGGAAATGGTTATGTTGAGTAACGAAACAAACAATAGTGCAAAAGTACTA
TCAGAAAAAAATGGTTCTTCTTCAATATCGGCGGATGATAAAATAAATGA
AAATATGGGAATATTCCAAATGAAAGTACAAAGTAAACCGGGGAAAAAAA
GTACCCCTTTAGCAAAGGTATCAGAGCATGGAGATTTATCAAGAGTTCAA
AGTGTATCTTTGTATCGCAATACCTTAATAAATATAGAAAGTATGCTACA
GCGTCAGTTGCGTGAGAAAGCCAAAGTGGATAGTATAGAATCGATTAAAA
TGCACATACTTATGCGCTTGAATTTAAAAAAACTTCCCAATATAACAAAA
CCAATTTCAGTACCACAAAATATAATAGATAACTTTTATAGAGATTATAA
TGCATCTTCAAAAACTACTGTTTGGAATCGCATGGAAAGCATTGACGAAT
CTCATTTGTCTATAAATGACACTTATGGCGACCACATAATGACTGATTTT
TTTGATGAAAGTTCATCCTCCCAAATGCAGGGAGATGATGCTAACACTGT
TAATGAATTTCTGATAGATTTGAATAAAAATCAAGCTAAAAAGTCGGACA
TTCCTATTAATACCAACGATGAGGAGTACGAGAGTATTTTGTCTCACATC
AGCAGTATATACATATTTCCCGAGGAAATTCAACCTCATGTTCGGCACAA
TCGCAAGGTCGATGTTTTTCGGTTTCAAATTGACAGTAGCTACTCAGACT
TGTCTTACGCTACCCTTCATCTATATTTACGTGGTTGGGATTGGATAAGT
GCTCATCAACCTGGACTTCTTGAAGAAATTAAAAAACAGCCACGTAAAGA
TATTGTTGTGACTATTCACCGCGCTATTAGGGTTGCAAATACAACAAGCT
TTAATCCTAAAGTCAAAATGTTTGAGTTTCGACATAGTATTCCGTCAGGA
CTTGGACAATGGGTTGCTGTGGACTTAAAGTCTCTGCTTGGTAATCTTGG
GTCTAATATGACGCAAGAAATTCTAATAAAGGGCGCAGAAACCTGGATGA
AGTCATTAGTGGTGACCACAGACAACACATCGAAAAATCCATTGACTGTT
CACATAGAAATTGGGTCGCAAAAAAAGCATCGAAGAAAGCGCAGCGTATA
TATGGACTGCACAGAAAATGATCATGACATGCGCTGTTGTCGATATCCCC
TCAAAGTTAATTTCACCAGCTTTGGATGGCATTTCGTTGTAGCACCAACG
TCCTTTGACGCATACTTCTGCAGTGGTGACTGCAAAGTTGGTTACCTAGA
GCAATATCCCCATACACATTTAGCAGCCTTAACGACATCGGCCACACCGT
GTTGCTCGCCGACAAAAATGAGTTCCTTAAGTTTGTTATATTTTGACGAT
AACCATAATCTGGTTTTAAGTGTTATACCAAATATGTCTGTCGAGGGTTG
CAGCTGTTCTGCAAGCTTTCTAGACCAT
BO10483.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 1797 | CG1838-PD | 1..1794 | 17..1810 | 8970 | 100 | Plus |
| myo-RC | 1797 | CG1838-PC | 1..1794 | 17..1810 | 8970 | 100 | Plus |
| myo-RA | 1797 | CG1838-PA | 1..1794 | 17..1810 | 8970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:22:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 510..2304 | 16..1810 | 8975 | 100 | Plus |
| myo-RC | 3056 | CG1838-RC | 869..2663 | 16..1810 | 8975 | 100 | Plus |
| myo-RA | 2896 | CG1838-RA | 386..2180 | 16..1810 | 8975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:22:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 693381..694390 | 1025..16 | 5050 | 100 | Minus |
| 4 | 1348131 | 4 | 692425..692844 | 1444..1025 | 2100 | 100 | Minus |
| 4 | 1348131 | 4 | 691994..692360 | 1810..1444 | 1835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:22:28 has no hits.
BO10483.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:08 Download gff for
BO10483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 1..1797 | 17..1811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:30:36 Download gff for
BO10483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 864..2657 | 17..1812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:23:20 Download gff for
BO10483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 387..2180 | 17..1812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:08 Download gff for
BO10483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 863..2661 | 16..1816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:42 Download gff for
BO10483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 387..2180 | 17..1812 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:42 Download gff for
BO10483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 691990..692359 | 1445..1812 | 99 | <- | Minus |
| 4 | 692425..692843 | 1026..1444 | 100 | <- | Minus |
| 4 | 693381..694389 | 17..1025 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:23:20 Download gff for
BO10483.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 712616..712985 | 1445..1812 | 99 | <- | Minus |
| arm_4 | 713051..713469 | 1026..1444 | 100 | <- | Minus |
| arm_4 | 714007..715015 | 17..1025 | 100 | | Minus |
BO10483.pep Sequence
Translation from 16 to 1828
> BO10483.pep
MLANSCCGWRKYKTHDQHHRTLKKKTRQNTSDTTVHIEVNSNEIQFPGSY
RFNLDSKKINIGRMNILGHKRGNFRVTRYVTVTVLLILSTAVNAYAQPEN
KSFSNSSNNDSPEMVMLSNETNNSAKVLSEKNGSSSISADDKINENMGIF
QMKVQSKPGKKSTPLAKVSEHGDLSRVQSVSLYRNTLINIESMLQRQLRE
KAKVDSIESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKT
TVWNRMESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDDANTVNEFLI
DLNKNQAKKSDIPINTNDEEYESILSHISSIYIFPEEIQPHVRHNRKVDV
FRFQIDSSYSDLSYATLHLYLRGWDWISAHQPGLLEEIKKQPRKDIVVTI
HRAIRVANTTSFNPKVKMFEFRHSIPSGLGQWVAVDLKSLLGNLGSNMTQ
EILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKHRRKRSVYMDCTE
NDHDMRCCRYPLKVNFTSFGWHFVVAPTSFDAYFCSGDCKVGYLEQYPHT
HLAALTTSATPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSCSAS
FLDH
BO10483.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-PD | 598 | CG1838-PD | 1..598 | 1..598 | 3137 | 100 | Plus |
| myo-PC | 598 | CG1838-PC | 1..598 | 1..598 | 3137 | 100 | Plus |
| myo-PA | 598 | CG1838-PA | 1..598 | 1..598 | 3137 | 100 | Plus |
| dpp-PA | 588 | CG9885-PA | 463..587 | 483..597 | 192 | 32.8 | Plus |
| dpp-PE | 588 | CG9885-PE | 463..587 | 483..597 | 192 | 32.8 | Plus |
