Clone BO10525 Report

Search the DGRC for BO10525

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:105
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG42575-RA
Protein status:BO10525.pep: validated full length
Sequenced Size:2035

Clone Sequence Records

BO10525.3prime Sequence

615 bp (356 high quality bases) assembled on 2006-04-19

> BO10525.3prime
ATGGTCTAGAAAGCTTGCGGCCCCACCCATGTCGTCCACGGCGATGGCAC
ACAGCACGTACATCATTCCGGCGCTGAGGAGCGCCGTAACCGGCACCGTT
ACGATCCATGCATAGGCAATATTCCGGAATAGATGCCAATCGACACTGCC
ATCATCCATGGGCGCAACTTCGTTATGGGTCTCCTTATCGGTCTGATCAT
TCGGCTGACTCTTCTTCTTGCGACCTGATGCACTCACATGACCCACAAAA
ACCACCGAACCGACCTTGCAGTGAGTAGTCGAAATGGGCAGGCCAATTTT
GCTGGCCAGCAGTACGGTGATGGCAGCTCCGACTTCAATAGTAAAGCCAG
TCGATGAGGTCATTTTCGTAAGGTCATTGCCAATGGTCTCGATGACTCGT
CGTCCCCACAGCCAGAGACCCACAGAGATGCCGATGCCGCCGTAGATCAG
AATATAGATGGGACTCTCGGCCTGCTGCATAACCGATCCCTCGCGATAGA
TCATATAGAGGGCAATCAGTGGGCCGATGGCGTTGCTCACATCATTGCCG
CCGTGCGCAAAACTGCCAAAATGTGGGCTGTCAGGATCTGCAGAAACGAG
AAGAGCATTGAAATC

BO10525.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:05:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG7628-PA 2004 CG7628-RA 1450..2001 570..19 2735 99.8 Minus
CG7628-PA 2004 CG7628-RA 1407..1446 615..576 200 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG42575-RB 2953 CG42575-RB 1693..2287 615..19 2920 99.5 Minus
CG42575-RA 3715 CG7628-RA 2455..3049 615..19 2920 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 10:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11133667..11133997 349..19 1655 100 Minus
3L 28110227 3L 11133334..11133597 615..350 1215 98.9 Minus
Blast to na_te.dros performed on 2015-02-01 10:18:48 has no hits.

BO10525.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:42:17 Download gff for BO10525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7628-PA 1407..2004 15..615 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:57:02 Download gff for BO10525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7628-PA 1407..2004 15..615 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:26:05 Download gff for BO10525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42575-RA 2455..3054 14..615 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:03:07 Download gff for BO10525.3prime
Subject Subject Range Query Range Percent Splice Strand
CG42575-RA 2455..3054 14..615 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:03:07 Download gff for BO10525.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 11133334..11133597 350..615 98 -> Minus
3L 11133667..11134002 14..349 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:26:05 Download gff for BO10525.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11126434..11126697 350..615 98 -> Minus
arm_3L 11126767..11127102 14..349 99   Minus

BO10525.5prime Sequence

522 bp (411 high quality bases) assembled on 2006-04-19

> BO10525.5prime
GAAGTTATCAGTCGACATGGAGAGCTTTGCGCCGGAATTACTTTGGATGG
TAGTCATCGGATTCCTAATCGCCTTCGTACTCGCCTTTGGCATCGGTGCC
AACGACGTGGCCAACTCATTTGGCACCAGTGTCGGCTCCGGTGTTCTGAC
CATCCGGCAGGCATGCGTGCTGGCCACCATTTGCGAAATTTCGGGTGCCG
TTTTGATTGGCTACAAGGTATCGGATACCATGCGCAAGGGAATCCTAGAA
GTTGGCCTATACGAGGGCGCCGAGGAGGTTCTGATGCTGGGCTGCGTGGC
CGCATTGGCCAGTAGCGCCGTTTGGCTGCTGGTGGCCACCTTTTTGAAGT
TGCCTATTTCGGGAACGCACAGTATCGTTGGCTCTACCATTGGATTTTCG
CTAGTGGCGCGCGGTGTACAGGGCCTAAAGTGGTCTACTTTGGGCACAAT
CGTCGGATCGTGGGTCATCTCACCGGGGCTGAGTGGAATTGTGAGCATTC
TGCTCTTCCTGGCCATTCGTCG

BO10525.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG7628-PA 2004 CG7628-RA 1..506 17..522 2480 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG42575-RB 2953 CG42575-RB 287..792 17..522 2500 99.6 Plus
CG42575-RA 3715 CG7628-RA 1049..1554 17..522 2500 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:42:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11129952..11130265 209..522 1540 99.4 Plus
3L 28110227 3L 11129688..11129881 17..210 970 100 Plus
Blast to na_te.dros performed on 2015-02-13 09:42:21 has no hits.

BO10525.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:42:18 Download gff for BO10525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7628-PA 1..506 17..522 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:57:04 Download gff for BO10525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7628-PA 1..506 17..522 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:45:40 Download gff for BO10525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42575-RA 1040..1554 8..522 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:02:20 Download gff for BO10525.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42575-RA 1040..1554 8..522 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:02:20 Download gff for BO10525.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 11129679..11129880 8..209 98 -> Plus
3L 11129953..11130265 210..522 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:45:40 Download gff for BO10525.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11122779..11122980 8..209 98 -> Plus
arm_3L 11123053..11123365 210..522 99   Plus

BO10525.complete Sequence

2035 bp (2035 high quality bases) assembled on 2006-08-21

GenBank Submission: FJ631798

> BO10525.complete
GAAGTTATCAGTCGACATGGAGAGCTTTGCGCCGGAATTACTTTGGATGG
TAGTCATCGGATTCCTAATCGCCTTCGTACTCGCCTTTGGCATCGGTGCC
AACGACGTGGCCAACTCATTTGGCACCAGTGTCGGCTCCGGTGTTCTGAC
CATCCGGCAGGCATGCGTGCTGGCCACCATTTGCGAAATTTCGGGTGCCG
TTTTGATTGGCTACAAGGTATCGGATACCATGCGCAAGGGAATCCTAGAA
GTTGGCCTATACGAGGGCGCCGAGGAGGTTCTGATGCTGGGCTGCGTGGC
CGCATTGGCCAGTAGCGCCGTTTGGCTGCTGGTGGCCACCTTTTTGAAGT
TGCCTATTTCGGGAACGCACAGTATCGTTGGCTCTACCATTGGATTTTCG
CTAGTGGCGCGCGGTGTACAGGGCCTAAAGTGGTCTACTTTGGGCACAAT
CGTCGGATCGTGGTTCATCTCACCGGTGCTGAGTGGAATTGTGAGCATTC
TGCTCTTCCTGGCCATTCGTCGTTTCATCCTACGTGCCCAGGAGCCGCTC
AAGGCCGGATTTCGATCGCTGCCCATCTTCTACGGTGTAACGTTCTTCAT
CAACGTTATCAGCGTTGTGTTGGACGGGCCCAAGCTGCTCTACATGGACA
ACATACCCACTTGGATAGCACTGACCGCCAGTTTTGGTCTCTCTTTGCTG
GTGGCATTGCTTACGCAATTGGTAGTGGTGCCTTTGCAGCGGCGCAAGAT
TGCCAAACGATTGCGGGCCGAGAATCCTGTCAAGTTTAATTTCGAGGACT
CCGTGGAATCTTCCCCGTCGGGAAGTCCCAAGAAGCAGCGTCGTCCCCTG
TCGCTGGTTAGCGAAGGAAAGCCACTGCCTGCCATCGCAGAAATAACCGA
GCTGGTCTCGTTGAGCGACAACTCGCCGAGGACCTTTAAGTTGGCTCCAT
TCGGATTGGCGGCCAAGAACAACAATGCGCTTGGGGAGGAGTACAAGATC
GATCCGCAGCTGATCAAAAAGGCTGAGGATCTGCTGGGCAAGGCTAGCCT
GGACAACACGGATCTGACGATTACCAGTCTGAATTTTATCGACGAGCAGC
AGCAACAACAGCAGCAGCAGCAAAATGGACGCAAGTTGCAGGAGTGCTTC
AAGCGGATGCAGTCGCCCAAGGAGGAGCAGAAGAGCAAGACGAACTCCAT
TGGCACGGACTTGGAAACCGGATCGACCAAAGCCACAAATAACAACCTTC
AAGTGGTGGAGAGCGGCGGCAGCCTTGATCTTATGATCAGTTCCACTTTA
TCGCCCAATTCCAGCAAGGTTCCTCTGATCGAGAGCAAGGAGGCGCTGAA
TGAGCAGGAGGAGGAGCTGAAACGAACGACGGGCGGTGGACGAAGAACCA
GTGGCGCCGAGGAGACTCCGGAGATTTCAATGCTCTTCTCGTTTCTGCAG
ATCCTGACAGCCACATTTGGCAGTTTTGCGCACGGCGGCAATGATGTGAG
CAACGCCATCGGCCCACTGATTGCCCTCTATATGATCTATCGCGAGGGAT
CGGTTATGCAGCAGGCCGAGAGTCCCATCTATATTCTGATCTACGGCGGC
ATCGGCATCTCTGTGGGTCTCTGGCTGTGGGGACGACGAGTCATCGAGAC
CATTGGCAATGACCTTACGAAAATAACCTCATCGACTGGCTTTACTATTG
AAGTCGGAGCTGCCATCACCGTACTGCTGGCCAGCAAAATTGGCCTGCCC
ATTTCGACTACTCACTGCAAGGTCGGTTCGGTGGTTTTTGTGGGTCATGT
GAGTGCATCAGGTCGCAAGAAGAAGAGTCAGCCGAATGATCAGACCGATA
AGGAGACCCATAACGAAGTTGCGCCCATGGATGATGGCAGTGTCGATTGG
CATCTATTCCGGAATATTGCCTATGCATGGATCGTAACGGTGCCGGTTAC
GGCGCTCCTCAGCGCCGGAATGATGTACGTGCTGTGTGCCATCGCCGTGG
ACGACATGGGTGGGGCCGCAAGCTTTCTAGACCAT

BO10525.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:04:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG42575-RB 2004 CG42575-PB 1..2001 17..2017 10005 100 Plus
CG42575-RA 2004 CG42575-PA 1..2001 17..2017 10005 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG42575-RB 2953 CG42575-RB 287..2287 17..2017 10005 100 Plus
CG42575-RA 3715 CG7628-RA 1049..3049 17..2017 10005 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11129952..11130549 209..806 2990 100 Plus
3L 28110227 3L 11133093..11133597 1182..1686 2525 100 Plus
3L 28110227 3L 11132647..11133024 806..1183 1890 100 Plus
3L 28110227 3L 11133667..11133997 1687..2017 1655 100 Plus
3L 28110227 3L 11129688..11129881 17..210 970 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:04:01 has no hits.

BO10525.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:54:08 Download gff for BO10525.complete
Subject Subject Range Query Range Percent Splice Strand
CG7628-RA 1..2004 17..2021 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:10:25 Download gff for BO10525.complete
Subject Subject Range Query Range Percent Splice Strand
CG7628-RA 331..2345 8..2022 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:56 Download gff for BO10525.complete
Subject Subject Range Query Range Percent Splice Strand
CG42575-RA 1049..3049 17..2019 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:54:09 Download gff for BO10525.complete
Subject Subject Range Query Range Percent Splice Strand
CG7628-RA 331..2345 8..2022 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:40 Download gff for BO10525.complete
Subject Subject Range Query Range Percent Splice Strand
CG42575-RA 1049..3049 17..2019 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:40 Download gff for BO10525.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11129688..11129880 17..209 100 -> Plus
3L 11129953..11130549 210..806 100 -> Plus
3L 11132648..11133024 807..1183 100 -> Plus
3L 11133095..11133597 1184..1686 100 -> Plus
3L 11133667..11133997 1687..2019 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:56 Download gff for BO10525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11126767..11127097 1687..2019 99   Plus
arm_3L 11122788..11122980 17..209 100 -> Plus
arm_3L 11123053..11123649 210..806 100 -> Plus
arm_3L 11125748..11126124 807..1183 100 -> Plus
arm_3L 11126195..11126697 1184..1686 100 -> Plus

BO10525.pep Sequence

Translation from 16 to 2035

> BO10525.pep
MESFAPELLWMVVIGFLIAFVLAFGIGANDVANSFGTSVGSGVLTIRQAC
VLATICEISGAVLIGYKVSDTMRKGILEVGLYEGAEEVLMLGCVAALASS
AVWLLVATFLKLPISGTHSIVGSTIGFSLVARGVQGLKWSTLGTIVGSWF
ISPVLSGIVSILLFLAIRRFILRAQEPLKAGFRSLPIFYGVTFFINVISV
VLDGPKLLYMDNIPTWIALTASFGLSLLVALLTQLVVVPLQRRKIAKRLR
AENPVKFNFEDSVESSPSGSPKKQRRPLSLVSEGKPLPAIAEITELVSLS
DNSPRTFKLAPFGLAAKNNNALGEEYKIDPQLIKKAEDLLGKASLDNTDL
TITSLNFIDEQQQQQQQQQNGRKLQECFKRMQSPKEEQKSKTNSIGTDLE
TGSTKATNNNLQVVESGGSLDLMISSTLSPNSSKVPLIESKEALNEQEEE
LKRTTGGGRRTSGAEETPEISMLFSFLQILTATFGSFAHGGNDVSNAIGP
LIALYMIYREGSVMQQAESPIYILIYGGIGISVGLWLWGRRVIETIGNDL
TKITSSTGFTIEVGAAITVLLASKIGLPISTTHCKVGSVVFVGHVSASGR
KKKSQPNDQTDKETHNEVAPMDDGSVDWHLFRNIAYAWIVTVPVTALLSA
GMMYVLCAIAVDDMGGAASFLDH

BO10525.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG42575-PB 667 CG42575-PB 1..667 1..667 3345 100 Plus
CG42575-PA 667 CG7628-PA 1..667 1..667 3345 100 Plus