Clone BO10567 Report

Search the DGRC for BO10567

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:105
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptFLASH-RA
Protein status:BO10567.pep: Imported from assembly
Sequenced Size:2566

Clone Sequence Records

BO10567.complete Sequence

2566 bp assembled on 2010-02-17

GenBank Submission: KX798162

> BO10567.complete
GAAGTTATCAGTCGACATGGAAACGCCTGCATATGCCACGAAATCTGGCG
GAGAACTGGTGCTGCCCGAAGCTCTGGAGGACTTGATGGATTTGGAAGAC
CAGGACGCGGGCGGGATGAAGTCCAACGTTAAGGATAAATCCATGGATTT
GGATATCTATCACGATTTGTACGATATAGAGCCTGCAGGTTCAAAGAAGC
CTGACCAAATGGACAGATCCCTTGAACTGGACATCTACGATGATTTGGAC
GACTTTCAGAAGGCCGAAGATCGTAATACCAAGGAGCTACAGGCATGGGA
AGCCAAATACGAAAAGGCACTGGCCGAAATTGAAGCGCTAAAGGTTGAGA
ATAAGGCACTTGGCAAGAAGATAAAAACCATGGAGGTTAATCTACAGAAT
CTACTGGACACAGCTAAGGCGGAGGTAAAGAGAAAAGAGACACTGATTGC
CGAGCTGCGAAACGAAAAGGACGATGTATGCTTCCGACGAAAACGAGCAC
GGGCGTTTGACGTACCAGGTGCAAGGGAACCCGAAAGTAAGCGTCCGAAA
GAATTTCAATCTACACCAATCGATGTCAGGAAATATCCGGAAACGAATAG
AAATCCGTTCAAAACGGCTGCAAAGGACGCCGCTAAGGATGATGCTAGGA
AGATGATGACCAAAAAAGATGACACAACGAAAGTCGTATCAAAAGATGTT
GAAAGAGGCGTAAAATCCAAGGAGGATAATAAGATGGCGACCAATAAAGA
TGATGACAAGAAGTCATCCTCAAAGGATGATGCTTGGAAATCTAGGACAA
GAGAAGACGCCAAGAAATCGGTCCAAAGAAGCAAGTCTCCCAGGCCGGAA
CACTCAAAGACCACCGATCGGAAATCTACTGCACAGGCTCGTCGTCCAGA
TCCACATCGCAGCCGGAGTCCAAAACATAATTCCCGGCGAGATCATCACA
GGAATCAAGAAAGCAGTTCCCGGCACGCCAAACGGCGAAGCCAATCCGCA
TCGCCCAGCAAGATACAATTGCCAAGAGAAAAAGCAAATGCCATCATCAC
ACTTACTGACGATGAAACAAATGACCAACGCAGCAAGAGCCCAGTCCCCG
TGACCGTCAAACTCGTAACTGAATCTCAACCGGCTGAAAAAGTCGTTTCC
AACCGAAGGGATGCTGCTTTAGAAACCAATGCAAATTCCTCAAAGGAATC
AAAAGTAGAGACGAAGGATATTACTCAACCGACAAATGGTTTAATTGCTG
AACCTTGTATTCCAAAACATGAGATTATTCCGGGGTTAAGCTTAATTAAC
CCAGAATCGGCGGATTTTTCTAAAAATGAGATCAAGTTAGATCCTGTAAT
CTTACAGGATCGTACAGAAGACTCTGGCCACCAACTTTTAAATAAGGAGC
CTATTCCCAAAGTTGTAGTACTTGAAAAATGTAAAAACATTTTAGCTGAA
GATTGCCCAGCTGATGAGCAACCCCTGGACAAATTCAAGGATGGAAAAGA
ATCTGAAGAGACACAGGCAAAGTTAGACAAAAAAGAGCCTTTTGCAGTTG
AAACTGCTGTTGAAACTCCTAGCAAAGAAGAAAGCAACGACAACATAGTA
TTATCAAAGAATACGACGTCTCAAGCTGATGTGTGTTCTCAGCATGATGA
GAATGATGAAGCAGAGATCCGAGAACCGATGGATCAAGTTAACTCCGTGG
TCGAGTCCGACTTGGGAGTAAGGATTATTGAGGATATTCGGTTGCCCAAG
ATGGCGAATATCGACCATTTTGCTGTAAAGGTCGACAACCATGGTGAAGC
GCCAGCAGCTGTCACAGATTCCGCTTTAAATCAAGAGAACCTAGCCACAC
AGGACCAAAAGATTTGCGCAGAGATGAAAGATCCAACTATTTTTACCACC
TCGGACGAAACTCCAATAAAGTCTGCTACTATATTATACGCCAAGCCCGA
TTCAACAAAACTGGATCACAGCGATGAACATGACGAGGTTATCCTGGAAA
CTGCCATTGACATGCTGAAGAAGGAGCAGGATGCAGCGAGCACCGCAGAA
TCCACATATCCGAAACTGCGGATCGCAGAAGATGCCATTGAGATGGCACT
AGAGCAATTGCACCAGCAGTCGCCGGACGAAACTGTGGTGACCTCAACGT
CGAATAGAGCGCCGCAGACGCCAAAAAGCCTCATCACAATACTCACCCAG
ACTCCAAAACAGGCTGATCCACTAAGATCCCAAACGAAATCGAAGACTGT
GTCGCCGATGGCGACGCCTAAGAAGACGGCCACGGAGAAGACCCCAGTGA
AGAAGAGAAAGGTCAACATGGATAGTTCGCCGCAGGTGCCAGCCCATGAT
GTTACCATCGACGAAACTTTGGGTGCCTGCAGTCTGCAGGACGAGAGCTC
AACTGTGACCAAACGCTGCTCCCTGGGCCACACAGACTACCAGTACGAAC
AGATAAAGGACGAGGTCATTTTAAGAGTGAAACGACGGGGTCGCCGACGA
AAGCCAACACCTATGGAAATACCTACGACTGCTGCGGACAAACCAATTGC
AAGCTTTCTAGACCAT

BO10567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:14:49
Subject Length Description Subject Range Query Range Score Percent Strand
FLASH-RB 2535 CG4616-PB 1..2532 17..2548 12660 100 Plus
FLASH-RA 2535 CG4616-PA 1..2532 17..2548 12660 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
FLASH-RB 3486 CG4616-RB 278..2809 17..2548 12660 100 Plus
FLASH-RA 2830 CG4616-RA 273..2804 17..2548 12660 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:14:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13208251..13209792 1007..2548 7710 100 Plus
2R 25286936 2R 13207651..13208193 466..1008 2715 100 Plus
2R 25286936 2R 13207092..13207349 17..274 1290 100 Plus
2R 25286936 2R 13207406..13207596 275..465 955 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:14:48 has no hits.

BO10567.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-17 09:38:11 Download gff for BO10567.complete
Subject Subject Range Query Range Percent Splice Strand
CG4616-RB 267..2798 17..2550 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:01 Download gff for BO10567.complete
Subject Subject Range Query Range Percent Splice Strand
FLASH-RA 273..2804 17..2550 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:03 Download gff for BO10567.complete
Subject Subject Range Query Range Percent Splice Strand
FLASH-RA 273..2804 17..2550 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:03 Download gff for BO10567.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13207406..13207596 275..465 100 -> Plus
2R 13207092..13207349 17..274 100 -> Plus
2R 13207651..13208193 466..1008 100 -> Plus
2R 13208253..13209792 1009..2550 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:01 Download gff for BO10567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9094597..9094854 17..274 100 -> Plus
arm_2R 9094911..9095101 275..465 100 -> Plus
arm_2R 9095156..9095698 466..1008 100 -> Plus
arm_2R 9095758..9097297 1009..2550 99   Plus

BO10567.5prime Sequence

723 bp (619 high quality bases) assembled on 2006-04-19

> BO10567.5prime
GAAGTTATCAGTCGACATGGAAACGCCTGCATATGCCACGAAATCTGGCG
GAGAACTGGTGCTGCCCGAAGCTCTGGAGGACTTGATGGATTTGGAAGAC
CAGGACGCGGGCGGGATGAAGTCCAACGTTAAGGATAAATCCATGGATTT
GGATATCTATCACGATTTGTACGATATAGAGCCTGCAGGTTCAAAGAAGC
CTGACCAAATGGACAGATCCCTTGAACTGGACATCTACGATGATTTGGAC
GACTTTCAGAAGGCCGAAGATCGTAATACCAAGGAGCTACAGGCATGGGA
AGCCAAATACGAAAAGGCACTGGCCGAAATTGAAGCGCTAAAGGTTGAGA
ATAAGGCACTTGGCAAGAAGATAAAAACCATGGAGGTTAATCTACAGAAT
CTACTGGACACAGCTAAGGCGGAGGTAAAGAGAAAAGAGACACTGATTGC
CGAGCTGCGAAACGAAAAGGACGATGTATGCTTCCGACGAAAACGAGCAC
GGGCGTTTGACGTACCAGGTGCAAGGGAACCCGAAAGTAAGCGTCCGAAA
GAATTTCAATCTACACCAATCGATGTCAGGAAATATCCGGAAACGAATAG
AAATCCGTTCAAAACGGCTGCAAAGGACGCCGCTAAGGATGATGCTAGGA
AGATGATGACCAAAAAAGATGACACAACGAAAGTCGTATCAAAAGATGTT
GAAAGAGGCGTAAAATCCAAGGA

BO10567.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:05:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG4616-PA 2535 CG4616-RA 1..707 17..723 3535 100 Plus
CG4616-PB 2535 CG4616-RB 1..707 17..723 3535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:42:48
Subject Length Description Subject Range Query Range Score Percent Strand
FLASH-RB 3486 CG4616-RB 278..984 17..723 3535 100 Plus
FLASH-RA 2830 CG4616-RA 273..979 17..723 3535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:42:46
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13207092..13207349 17..274 1290 100 Plus
2R 25286936 2R 13207651..13207908 466..723 1290 100 Plus
2R 25286936 2R 13207406..13207596 275..465 955 100 Plus
Blast to na_te.dros performed on 2015-02-10 23:42:47 has no hits.

BO10567.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:43:00 Download gff for BO10567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4616-PA 1..706 17..722 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:57:58 Download gff for BO10567.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4616-PB 1..706 17..722 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:25:58 Download gff for BO10567.5prime
Subject Subject Range Query Range Percent Splice Strand
FLASH-RA 273..978 17..722 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:18:00 Download gff for BO10567.5prime
Subject Subject Range Query Range Percent Splice Strand
FLASH-RA 273..978 17..722 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:18:00 Download gff for BO10567.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13207092..13207349 17..274 100 -> Plus
2R 13207406..13207596 275..465 100 -> Plus
2R 13207651..13207907 466..722 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:25:58 Download gff for BO10567.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9094597..9094854 17..274 100 -> Plus
arm_2R 9094911..9095101 275..465 100 -> Plus
arm_2R 9095156..9095412 466..722 100   Plus

BO10567.pep Sequence

Translation from 16 to 2566

> BO10567.pep
METPAYATKSGGELVLPEALEDLMDLEDQDAGGMKSNVKDKSMDLDIYHD
LYDIEPAGSKKPDQMDRSLELDIYDDLDDFQKAEDRNTKELQAWEAKYEK
ALAEIEALKVENKALGKKIKTMEVNLQNLLDTAKAEVKRKETLIAELRNE
KDDVCFRRKRARAFDVPGAREPESKRPKEFQSTPIDVRKYPETNRNPFKT
AAKDAAKDDARKMMTKKDDTTKVVSKDVERGVKSKEDNKMATNKDDDKKS
SSKDDAWKSRTREDAKKSVQRSKSPRPEHSKTTDRKSTAQARRPDPHRSR
SPKHNSRRDHHRNQESSSRHAKRRSQSASPSKIQLPREKANAIITLTDDE
TNDQRSKSPVPVTVKLVTESQPAEKVVSNRRDAALETNANSSKESKVETK
DITQPTNGLIAEPCIPKHEIIPGLSLINPESADFSKNEIKLDPVILQDRT
EDSGHQLLNKEPIPKVVVLEKCKNILAEDCPADEQPLDKFKDGKESEETQ
AKLDKKEPFAVETAVETPSKEESNDNIVLSKNTTSQADVCSQHDENDEAE
IREPMDQVNSVVESDLGVRIIEDIRLPKMANIDHFAVKVDNHGEAPAAVT
DSALNQENLATQDQKICAEMKDPTIFTTSDETPIKSATILYAKPDSTKLD
HSDEHDEVILETAIDMLKKEQDAASTAESTYPKLRIAEDAIEMALEQLHQ
QSPDETVVTSTSNRAPQTPKSLITILTQTPKQADPLRSQTKSKTVSPMAT
PKKTATEKTPVKKRKVNMDSSPQVPAHDVTIDETLGACSLQDESSTVTKR
CSLGHTDYQYEQIKDEVILRVKRRGRRRKPTPMEIPTTAADKPIASFLDH

BO10567.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
FLASH-PB 844 CG4616-PB 1..844 1..844 4305 100 Plus
FLASH-PA 844 CG4616-PA 1..844 1..844 4305 100 Plus
Strn-Mlck-PT 7905 CG44162-PT 3475..4287 25..798 206 19 Plus
Strn-Mlck-PV 7944 CG44162-PV 3514..4326 25..798 206 19 Plus
Strn-Mlck-PS 8216 CG44162-PS 3475..4287 25..798 206 19 Plus
Strn-Mlck-PT 7905 CG44162-PT 4320..5093 25..816 202 19.9 Plus
Strn-Mlck-PV 7944 CG44162-PV 4359..5132 25..816 202 19.9 Plus
Strn-Mlck-PT 7905 CG44162-PT 4125..4844 25..770 201 19.7 Plus
Strn-Mlck-PV 7944 CG44162-PV 4164..4883 25..770 201 19.7 Plus
Strn-Mlck-PT 7905 CG44162-PT 4515..5178 25..704 165 18.7 Plus
Strn-Mlck-PV 7944 CG44162-PV 4554..5217 25..704 165 18.7 Plus