Clone BO10595 Report

Search the DGRC for BO10595

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:105
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG11107-RA
Protein status:BO10595.pep: validated full length
Sequenced Size:2221

Clone Sequence Records

BO10595.5prime Sequence

579 bp (335 high quality bases) assembled on 2006-04-19

> BO10595.5prime
GAAGTTATCAGTCGACATGTCCAAGCGTCGAATCGAAGTGGGGGAGACCT
ACGGCAGCAAGGCGAAGAAGGACCCGGAGGCGTCCTCCTCGTCGGCGGCA
GCCGCTGCCGGCACAGTGGCTCAAATCCTGGGCGGATTCGTGCCCAACAA
GCAACCGCCCACGATGAACCCGCTGACCAACACGCCGTACTCACAACGGT
ACCAGAATCTCTACAAGAAGCGCATTGCGCTGCCCGTGTTCGAGTACCAG
GCGGACTTTATGCGGCTGCTCAGCCTGCACCAGTGTATTGTGCTGGTGGG
CGAGACAGGCTCCGGCAAGACGACCCAGATCCCGCAGTGGTGCGTGGACT
TCGCAGTATCCAAGGGGCGCAAGGGAGTCTCCTGCACACAGCCACGTCGA
GTTGCCGCCATGTCCGTGGCCCAGCGCGTTTCGGAGGAGATGGACGTAAA
ACTGGGCGAAGAGGTCGGCTACTCCATCCGTTTCGAGGGACTGCTCCACG
GCCAAGACGCTGCTCAAGTACATGACCGATGGTATGTTGTTGCGCGAGGC
CATGTCTGATCCCATGCTGGACCAGTACC

BO10595.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-PA 2190 CG11107-RA 1..472 17..488 2335 99.7 Plus
CG11107-PA 2190 CG11107-RA 471..562 488..579 460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:29:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-RB 2610 CG11107-RB 204..766 16..579 2780 99.6 Plus
CG11107-RA 2747 CG11107-RA 341..903 16..579 2780 99.6 Plus
l(1)G0007-RA 3880 CG32604-RA 1851..2015 383..548 265 77.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:29:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7387635..7388143 70..579 2485 99.6 Plus
2R 25286936 2R 7387527..7387581 16..70 275 100 Plus
2L 23513712 2L 19125791..19125896 488..383 215 80.2 Minus
Blast to na_te.dros performed on 2015-02-12 06:29:07 has no hits.

BO10595.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:43:34 Download gff for BO10595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-PA 1..562 17..579 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:58:42 Download gff for BO10595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-PA 1..562 17..579 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 13:37:43 Download gff for BO10595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 341..903 16..579 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:17:07 Download gff for BO10595.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 341..903 16..579 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:17:07 Download gff for BO10595.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7387527..7387580 16..69 100 -> Plus
2R 7387635..7388143 70..579 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 13:37:43 Download gff for BO10595.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3275032..3275085 16..69 100 -> Plus
arm_2R 3275140..3275648 70..579 99   Plus

BO10595.complete Sequence

2221 bp (2221 high quality bases) assembled on 2006-08-21

GenBank Submission: FJ631807

> BO10595.complete
GAAGTTATCAGTCGACATGTCCAAGCGTCGAATCGAAGTGGGGGAGACCT
ACGGCAGCAAGGCGAAGAAGGACCCGGAGGCGTCCTCCTCGTCGGCGGCA
GCCGCTGCCGGCACAGTGGCTCAAATCCTGGGCGGATTCGTGCCCAACAA
GCAACCGCCCACGATGAACCCGCTGACCAACACGCCGTACTCACAACGGT
ACCAGAATCTCTACAAGAAGCGCATTGCGCTGCCCGTGTTCGAGTACCAG
GCGGACTTTATGCGGCTGCTCAGCCTGCACCAGTGTATTGTGCTGGTGGG
CGAGACAGGCTCCGGCAAGACGACCCAGATCCCGCAGTGGTGCGTGGACT
TCGCAGTATCCAAGGGGCGCAAGGGAGTCTCCTGCACACAGCCACGTCGA
GTTGCCGCCATGTCCGTGGCCCAGCGCGTTTCGGAGGAGATGGACGTAAA
ACTGGGCGAAGAGGTCGGCTACTCCATCCGTTTCGAGGACTGCTCCACGG
CCAAGACGCTGCTCAAGTACATGACCGATGGTATGTTGTTGCGCGAGGCC
ATGTCTGATCCCATGCTGGACCAGTACCAGGTCATTCTGCTTGACGAGGC
TCACGAGCGGACCTTGGCCACTGACATTCTAATGGGCGTGCTCAAGGAGG
TCATTCGTCAGCGCAGCGACCTTAAGCTGGTGGTCATGTCCGCCACACTG
GACGCCGGCAAGTTCCAGCAGTATTTCGACAACGCACCGCTCATGAAAGT
GCCCGGTCGCACACATCCCGTGGAGATCTTCTACACGCCCGAACCAGAAA
GAGATTACCTAGAGGCTGCTATTCGCACGGTAATCCAGATACACATGTGC
GAGGAAATTGAGGGTGATATCCTAATGTTCCTCACGGGCCAGGAGGAGAT
TGAGGAGGCTTGCAAGCGCATCAAGCGCGAGATCGACAATTTGGGCTCAG
AAATTGGAGAGCTGAAATGCATTCCCCTGTACTCGACGCTGCCGCCCAAT
TTGCAGCAGCGCATCTTCGAACCGGCCCCGCCGCCAAATGCTAATGGCGC
AATTGGACGCAAGGTCGTGGTGTCCACCAACATTGCCGAAACCTCGCTGA
CCATTGACGGAGTGGTGTTCGTGATTGATCCAGGCTTCGCCAAGCAAAAG
GTGTACAATCCTCGCATTCGAGTGGAGAGTCTGCTCGTCTCACCCATTTC
AAAAGCGTCTGCGCAGCAGAGATCCGGTCGTGCTGGACGTACGCGTCCTG
GCAAGTGTTTCCGTCTGTACACGGAAAAGGCGTTTAAAAACGAGATGCAG
GACAACACCTACCCCGAAATTCTGCGCTCCAATTTGGGCACTGTGGTTCT
GCAGCTCAAGAAGTTGGGCATCGATGATCTGGTGCATTTCGATTTTATGG
ACCCCCCTGCTCCAGAGACCTTGATGCGTGCCCTGGAGTTGCTCAACTAT
CTGGCCGCCCTGGATGATGACGGAAATCTTACAGACCTGGGTGCCGTTAT
GTCCGAGTTTCCATTGGATCCGCAGCTGGCCAAAATGCTGATTGCCAGCT
GCCAACATAACTGCTCTAATGAAATACTTTCCATAACGGCCATGTTGTCG
GTTCCACAATGCTTCGTTCGCCCCAACGAGGCGAAGAAAGCTGCCGATGA
GGCCAAGATGCGATTCGCCCACATTGACGGAGACCACCTGACGTTGCTTA
ATGTCTATCACGCCTTTAAGCAGAGCAGTGAGGATCCAAACTGGTGCTAC
GAGAACTTCATAAACTTCCGCTCGCTAAAGAGTGCGGATAACGTGCGCCA
GCAGCTGGCTAGAATCATGGACCGCTTCAACTTGCGGCGCACGAGCACTG
AATTCACCTCGAAGGACTACTATGTAAACATCCGAAAGGCCCTCGTGCAG
GGCTTCTTCATGCAGGTGGCCCACCTGGAGCGCACTGGCTACTATCTGAC
CATCAAGGACAACCAGAACGTGCAGCTGCATCCGTCGACTTGTCTCGACC
ACAAGCCCGATTGGGTCATCTACAATGAGTTCGTGCTGACTACAAAGAAC
TACATTCGCACGGTGACAGATGTCAAACCTGAATGGTTGTGCTGCCTGGC
GCCCCAATATTATGACTTGAACAACTTCCCCCAGTGCGAGGCGAAACGAC
AGCTGGAGTTGTTGCAACAGCGGTTGGAGACCAAGCAGTACCAGAAGGGT
TTCGCAAGCTTTCTAGACCAT

BO10595.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-RB 2190 CG11107-PB 1..2187 17..2203 10920 100 Plus
CG11107-RA 2190 CG11107-PA 1..2187 17..2203 10920 100 Plus
l(1)G0007-RA 3669 CG32604-PA 1750..1914 383..547 285 78.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-RB 2610 CG11107-RB 204..2391 16..2203 10925 100 Plus
CG11107-RA 2747 CG11107-RA 341..2528 16..2203 10925 100 Plus
l(1)G0007-RA 3880 CG32604-RA 1851..2015 383..547 285 78.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7387635..7388430 70..865 3965 99.9 Plus
2R 25286936 2R 7388707..7389182 863..1338 2380 100 Plus
2R 25286936 2R 7390268..7390625 1725..2082 1775 99.7 Plus
2R 25286936 2R 7389246..7389510 1337..1601 1325 100 Plus
2R 25286936 2R 7390077..7390201 1601..1725 625 100 Plus
2R 25286936 2R 7390680..7390804 2079..2203 625 100 Plus
2R 25286936 2R 7387527..7387581 16..70 275 100 Plus
2L 23513712 2L 19125754..19125896 525..383 250 78.3 Minus
Blast to na_te.dros performed on 2014-11-26 22:14:52 has no hits.

BO10595.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:54 Download gff for BO10595.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 1..2190 17..2207 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:31:57 Download gff for BO10595.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 314..2505 16..2208 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:51:45 Download gff for BO10595.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 342..2528 17..2205 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:55 Download gff for BO10595.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 314..2505 16..2208 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:55:27 Download gff for BO10595.complete
Subject Subject Range Query Range Percent Splice Strand
CG11107-RA 342..2528 17..2205 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:55:27 Download gff for BO10595.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7390268..7390621 1725..2078 100 -> Plus
2R 7390680..7390804 2079..2205 98   Plus
2R 7387528..7387580 17..69 100 -> Plus
2R 7387635..7388428 70..863 99 -> Plus
2R 7388708..7389181 864..1337 100 -> Plus
2R 7389247..7389510 1338..1601 100 -> Plus
2R 7390078..7390200 1602..1724 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:51:45 Download gff for BO10595.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3275033..3275085 17..69 100 -> Plus
arm_2R 3275140..3275933 70..863 99 -> Plus
arm_2R 3276213..3276686 864..1337 100 -> Plus
arm_2R 3276752..3277015 1338..1601 100 -> Plus
arm_2R 3277583..3277705 1602..1724 100 -> Plus
arm_2R 3277773..3278126 1725..2078 100 -> Plus
arm_2R 3278185..3278309 2079..2205 98   Plus

BO10595.pep Sequence

Translation from 16 to 2221

> BO10595.pep
MSKRRIEVGETYGSKAKKDPEASSSSAAAAAGTVAQILGGFVPNKQPPTM
NPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSG
KTTQIPQWCVDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEV
GYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTL
ATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTH
PVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACK
RIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKV
VVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQ
QRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPL
DPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRF
AHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARI
MDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQ
NVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYD
LNNFPQCEAKRQLELLQQRLETKQYQKGFASFLDH

BO10595.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11107-PB 729 CG11107-PB 1..729 1..729 3787 100 Plus
CG11107-PA 729 CG11107-PA 1..729 1..729 3787 100 Plus
l(2)37Cb-PA 894 CG10689-PA 236..870 56..699 1732 53.1 Plus
pea-PA 1242 CG8241-PA 579..1227 65..721 1709 51.7 Plus
l(1)G0007-PA 1222 CG32604-PA 523..1153 61..701 1484 45.7 Plus