Clone BO10596 Report

Search the DGRC for BO10596

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:105
Well:96
Vector:pDNR-Dual
Associated Gene/Transcriptome-RF
Protein status:BO10596.pep: validated full length
Sequenced Size:2440

Clone Sequence Records

BO10596.3prime Sequence

668 bp (545 high quality bases) assembled on 2006-04-19

> BO10596.3prime
ATGGTCTAGAAAGCTTGCTTTGGCACTTTTCATTAGGCGACTGCTGGCAA
AACATTCGCCAAAGAAGCGATCCAATGAATGATACAAATGGGGTCGCACA
TTGGACAGTCCATGATCCTCGTCAGCGTAGCTAATCTGCTTGAAGAGAAT
ATCTTGACGCTCCAGATTCTTGGCCAATATCATGGCCTGCTGGTAGTGCA
CATTATCATCCAGTGTGCCATGTACCAGAAGGTACTTCTTACCCCTCAGC
TTCACGGCCATTGTGCTCAGTCTAGAGTTGGCATAGCCCAGCTCATTCGT
GTTGGGAAGACCCATATAGCGCTCTGTGTAAATGGAGTCATAGTAAGCCC
AATCCGTGACTGGAGCTATCGAGGCTGCACACTTGAACACCTTGGCTTCA
TCATTGGCCAGAGCCATGGCAGCCGCGTAGCCACCATATGACCAGCCCCA
AATGCCAACGTGATCGGGATCAATGTAGTTAAACAGCGTAGAGAGTTTTT
GAGTTACGTTGATCTGATCGCTGATCTCCACGGTGCCCAACTTTAAGTAG
ATGGCATGGAGTAGACTCTCTCCACGGAGTCCGGAGCCACGACCATCGAT
CTTGGCATAGATCACAGACTGATTGGAGCTCAAATATGTGCCCCAGTCCA
CCATCCATTTGTTGGTAA

BO10596.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG32145-PA 2409 ome-RA 1757..2406 668..19 3250 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
ome-RH 3263 CG42280-RH 1837..2486 668..19 3250 100 Minus
ome-RG 4070 CG32145-RB 2644..3293 668..19 3250 100 Minus
ome-RF 3356 CG32145-RA 1930..2579 668..19 3250 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:54:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14746707..14746913 339..133 1035 100 Minus
3L 28110227 3L 14746236..14746404 668..500 845 100 Minus
3L 28110227 3L 14746487..14746647 499..339 805 100 Minus
3L 28110227 3L 14746978..14747091 132..19 570 100 Minus
Blast to na_te.dros performed on 2015-02-10 19:54:36 has no hits.

BO10596.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:43:35 Download gff for BO10596.3prime
Subject Subject Range Query Range Percent Splice Strand
ome-PA 1759..2409 15..666 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:58:43 Download gff for BO10596.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32145-PA 1759..2409 15..666 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:37:08 Download gff for BO10596.3prime
Subject Subject Range Query Range Percent Splice Strand
ome-RF 1930..2582 15..668 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:34:29 Download gff for BO10596.3prime
Subject Subject Range Query Range Percent Splice Strand
ome-RF 1930..2582 15..668 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:34:29 Download gff for BO10596.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 14746236..14746404 500..668 100 -> Minus
3L 14746487..14746647 339..499 100 -> Minus
3L 14746708..14746913 133..338 100 -> Minus
3L 14746978..14747094 15..132 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:37:08 Download gff for BO10596.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14739336..14739504 500..668 100 -> Minus
arm_3L 14739587..14739747 339..499 100 -> Minus
arm_3L 14739808..14740013 133..338 100 -> Minus
arm_3L 14740078..14740194 15..132 98   Minus

BO10596.5prime Sequence

627 bp (392 high quality bases) assembled on 2006-04-19

> BO10596.5prime
GAAGTTATCAGTCGACATGTCTGGTAATGATGTTTCGGTGACTGAAACAG
CACAGAGCGATCAGAATCTAATGCATACCAAGGAGAAGAAGCGCCGGGTG
CGAATCATCCTGACTGTTGTAACCACGGTCATAGCGGTTGCTCTATTGGC
CACGGCCCTGGTTTTCATTCTCCGGACGGATGAAAAGGATGCCGACGACT
CTGACTCANACTCAAACAATGCCATCGATTTGGAGGATGTGCTAAGTGGT
CAACTATATGCCAAGCGATTCAACGGCAGCTGGAGCAATGGAAACAGTCT
CATTTACAAGGAGAATACGTCCATCATGGAGTTCGATGCCAAGACGGGTG
AACGTTCCATCCTGCTGGAAGATGCGCAACATTATGTCCTGTACGAAAAG
TCCGCCGATGGGGAGTTCCTTTTGCTGGCAAAGAACTACAAGAAGAACTT
CCGGTACAGCTTTCTAGCTGAGTACGATCTGTACAATCTGAACACAAAAG
AATTCATCCAGTTGACCATCCAAAACGAGCAGCACTACCTGAGCATGGTC
CAATGGTCACCGGTGGGAAATGCCCTTGTGATCAATTACGATCGGAATCT
GTACTACAAGGAGAGTGCATTGGCGCA

BO10596.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG32145-PA 2409 ome-RA 1..611 17..627 3036 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
ome-RF 3356 CG32145-RA 174..784 17..627 3044 99.8 Plus
ome-RG 4070 CG32145-RB 934..1498 63..627 2814 99.8 Plus
ome-RE 4109 CG42280-RE 973..1537 63..627 2814 99.8 Plus
ome-RG 4070 CG32145-RB 174..221 17..64 240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14744530..14744838 319..627 1545 100 Plus
3L 28110227 3L 14744187..14744443 63..319 1274 99.6 Plus
3L 28110227 3L 14736088..14736135 17..64 240 100 Plus
Blast to na_te.dros performed on 2015-02-11 12:09:13 has no hits.

BO10596.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:43:36 Download gff for BO10596.5prime
Subject Subject Range Query Range Percent Splice Strand
ome-PA 1..610 17..626 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:58:45 Download gff for BO10596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32145-PA 1..610 17..626 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:26:19 Download gff for BO10596.5prime
Subject Subject Range Query Range Percent Splice Strand
ome-RF 174..783 17..626 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:41:25 Download gff for BO10596.5prime
Subject Subject Range Query Range Percent Splice Strand
ome-RF 174..783 17..626 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:41:25 Download gff for BO10596.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14736088..14736135 17..64 100 -> Plus
3L 14744189..14744443 65..319 99 -> Plus
3L 14744531..14744837 320..626 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:26:19 Download gff for BO10596.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14729188..14729235 17..64 100 -> Plus
arm_3L 14737289..14737543 65..319 99 -> Plus
arm_3L 14737631..14737937 320..626 100   Plus

BO10596.complete Sequence

2440 bp assembled on 2007-10-05

GenBank Submission: FJ631808

> BO10596.complete
GAAGTTATCAGTCGACATGTCTGGTAATGATGTTTCGGTGACTGAAACAG
CACAGAGCGATCAGAATCTAATGCATACCAAGGAGAAGAAGCGCCGGGTG
CGAATCATCCTGACTGTTGTAACCACGGTCATAGCGGTTGCTCTATTGGC
CACGGCCCTGGTTTTCATTCTCCGGACGGATGAAAAGGATGCCGACGACT
CTGACTCAAACTCAAACAATGCCATCGATTTGGAGGATGTGCTAAGTGGT
CAACTATATGCCAAGCGATTCAACGGCAGCTGGAGCAATGGAAACAGTCT
CATTTACAAGGAGAATACGTCCATCATGGAGTTCGATGCCAAGACGGGTG
AACGTTCCATCCTGCTGGAAGATGCGCAACATTATGTCCTGTACGAAAAG
TCCGCCGATGGGGAGTTCCTTTTGCTGGCAAAGAACTACAAGAAGAACTT
CCGGTACAGCTTTCTAGCTGAGTACGATCTGTACAATCTGAACACAAAAG
AATTCATCCAGTTGACCATCCAAAACGAGCAGCACTACCTGAGCATGGTC
CAATGGTCACCGGTGGGAAATGCCCTTGTGATCAATTACGATCGGAATCT
GTACTACAAGGAGAGTGCATTGGCGCAGGAGATTGCCCTCACTAGCGATG
AACAAGCGGGTATACTGAATGGCATTCCCGATTGGGTGTACGAGGAAGAG
GTATTCAGCTCCAATGTGGCCACCTGGTTCAACCCATCGGGCACCCAATT
GGCCTTCATCAAGTTCGACGATTCGTCCACTCACCTGATCAATTTCCCCT
ACTACGGAGATGCCGGCGATTTGCGCTATCAGTATCCACTGCATCAGGTC
ATCGCCTATCCAAAGGCTGGTTCCTCGAATCCGCGGGTGGAACTGGTGAT
GGTCGATCTAAAGAGAGCCGTTGCTGGTGGAGATTTCGTGACCGTGATGC
CGGTTCCGTCGGCCCTCAACACGGAAACGGACTACATTGTCACCGTGGTC
AGTTGGGTGGACGATGACAACGTTCTGTCCATCTGGATGAACCGCATTCA
AAATGCCGCCTATGTCGTCACCTTCGACGGACTCAACAGGAAAGTGATTT
ATAGTGCCGAATCGAAGACCGGTTGGGTTGATCTCTATACCGCTCCGTTC
CGTAACCGCAATGGATCCCGTCTGGCCTTCGTCCTGCCGCACAACAACTA
TAAGCACGTCCAGCTCCTGAGCTCCACGGTGGCCAGTTCCGAGCCACAAG
CACTGGAGCCCCTGACCGAGGGCAAGTATGTGGTGGACAGCATCCTCCAC
TGGGACGGAAAGAACGACATCATATTCTACACGGCCAACACAGAGGATCA
TCCCGAGCAGCTGCATCTGTACGCCATTCGGGCACTGGCCAAGCAGAGTC
CCAAGTGCCTCACGTGCAACCTTATCAAGTCCGGGGATGTGCAACAGACC
TACTTCTCGGCCACTTTCAACGACAATAACCACATTGTGATCACCTCTCT
GGGACCTGGAATACCCACAACCCATATATACGAGTGGAAATATGAGAACT
CTCAAGTTGTCATCTCTAAAGTCCTCGACTGGGAAACCAATGAAAGCCTG
CGTGCCAAACTGAAGGGCGTGGCTCTACCTTCCCACAAAATTCTAACCGT
AGACATTGACGGCGGCTTTCAGGCAAAGGTGCTCCTCCAGCTGCCGCCCA
ACTTGGACACAAGTGGCGCAACCAAGTATCCCATGCTCGTGGATGTCTAT
GGTGGCCCAGATTCCTATTCTGTTACCAACAAATGGATGGTGGACTGGGG
CACATATTTGAGCTCCAATCAGTCTGTGATCTATGCCAAGATCGATGGTC
GTGGCTCCGGACTCCGTGGAGAGAGTCTACTCCATGCCATCTACTTAAAG
TTGGGCACCGTGGAGATCAGCGATCAGATCAACGTAACTCAAAAACTCTC
TACGCTGTTTAACTACATTGATCCCGATCACGTTGGCATTTGGGGCTGGT
CATATGGTGGCTACGCGGCTGCCATGGCTCTGGCCAATGATGAAGCCAAG
GTGTTCAAGTGTGCAGCCTCGATAGCTCCAGTCACGGATTGGGCTTACTA
TGACTCCATTTACACAGAGCGCTATATGGGTCTTCCCAACACGAATGAGC
TGGGCTATGCCAACTCTAGACTGAGCACAATGGCCGTGAAGCTGAGGGGT
AAGAAGTACCTTCTGGTACATGGCACACTGGATGATAATGTGCACTACCA
GCAGGCCATGATATTGGCCAAGAATCTGGAGCGTCAAGATATTCTCTTCA
AGCAGATTAGCTACGCTGACGAGGATCATGGACTGTCCAATGTGCGACCC
CATTTGTATCATTCATTGGATCGCTTCTTTGGCGAATGTTTTGCCAGCAG
TCGCCTAATGAAAAGTGCCAAAGCAAGCTTTCTAGACCAT

BO10596.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:56:42
Subject Length Description Subject Range Query Range Score Percent Strand
ome-RF 2409 CG42280-PF 1..2406 17..2422 12030 100 Plus
ome-RG 3123 CG42280-PG 761..3120 63..2422 11800 100 Plus
ome-RE 2772 CG42280-PE 410..2769 63..2422 11800 100 Plus
ome-RG 3123 CG42280-PG 1..48 17..64 240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:56:43
Subject Length Description Subject Range Query Range Score Percent Strand
ome-RF 3356 CG32145-RA 174..2579 17..2422 12030 100 Plus
ome-RG 4070 CG32145-RB 934..3293 63..2422 11800 100 Plus
ome-RE 4109 CG42280-RE 973..3332 63..2422 11800 100 Plus
ome-RG 4070 CG32145-RB 174..221 17..64 240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:56:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14744530..14745307 319..1096 3890 100 Plus
3L 28110227 3L 14745427..14745881 1096..1550 2275 100 Plus
3L 28110227 3L 14744187..14744443 63..319 1285 100 Plus
3L 28110227 3L 14745955..14746177 1551..1773 1115 100 Plus
3L 28110227 3L 14746707..14746913 2102..2308 1035 100 Plus
3L 28110227 3L 14746235..14746404 1772..1941 850 100 Plus
3L 28110227 3L 14746487..14746647 1942..2102 805 100 Plus
3L 28110227 3L 14746978..14747091 2309..2422 570 100 Plus
3L 28110227 3L 14736088..14736135 17..64 240 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:56:41 has no hits.

BO10596.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:04:03 Download gff for BO10596.complete
Subject Subject Range Query Range Percent Splice Strand
ome-RF 1..2409 17..2426 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:48:29 Download gff for BO10596.complete
Subject Subject Range Query Range Percent Splice Strand
ome-RF 171..2576 17..2424 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:34:49 Download gff for BO10596.complete
Subject Subject Range Query Range Percent Splice Strand
ome-RF 174..2579 17..2424 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:04:03 Download gff for BO10596.complete
Subject Subject Range Query Range Percent Splice Strand
ome-RF 171..2579 17..2426 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:54 Download gff for BO10596.complete
Subject Subject Range Query Range Percent Splice Strand
ome-RF 174..2579 17..2424 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:54 Download gff for BO10596.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14736088..14736135 17..64 100 -> Plus
3L 14744189..14744443 65..319 100 -> Plus
3L 14744531..14745307 320..1096 100 -> Plus
3L 14745428..14745881 1097..1550 100 -> Plus
3L 14745955..14746175 1551..1771 100 -> Plus
3L 14746235..14746404 1772..1941 100 -> Plus
3L 14746487..14746647 1942..2102 100 -> Plus
3L 14746708..14746913 2103..2308 100 -> Plus
3L 14746978..14747091 2309..2424 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:34:49 Download gff for BO10596.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14729188..14729235 17..64 100 -> Plus
arm_3L 14737289..14737543 65..319 100 -> Plus
arm_3L 14737631..14738407 320..1096 100 -> Plus
arm_3L 14738528..14738981 1097..1550 100 -> Plus
arm_3L 14739055..14739275 1551..1771 100 -> Plus
arm_3L 14739335..14739504 1772..1941 100 -> Plus
arm_3L 14739587..14739747 1942..2102 100 -> Plus
arm_3L 14739808..14740013 2103..2308 100 -> Plus
arm_3L 14740078..14740191 2309..2424 98   Plus

BO10596.pep Sequence

Translation from 16 to 2440

> BO10596.pep
MSGNDVSVTETAQSDQNLMHTKEKKRRVRIILTVVTTVIAVALLATALVF
ILRTDEKDADDSDSNSNNAIDLEDVLSGQLYAKRFNGSWSNGNSLIYKEN
TSIMEFDAKTGERSILLEDAQHYVLYEKSADGEFLLLAKNYKKNFRYSFL
AEYDLYNLNTKEFIQLTIQNEQHYLSMVQWSPVGNALVINYDRNLYYKES
ALAQEIALTSDEQAGILNGIPDWVYEEEVFSSNVATWFNPSGTQLAFIKF
DDSSTHLINFPYYGDAGDLRYQYPLHQVIAYPKAGSSNPRVELVMVDLKR
AVAGGDFVTVMPVPSALNTETDYIVTVVSWVDDDNVLSIWMNRIQNAAYV
VTFDGLNRKVIYSAESKTGWVDLYTAPFRNRNGSRLAFVLPHNNYKHVQL
LSSTVASSEPQALEPLTEGKYVVDSILHWDGKNDIIFYTANTEDHPEQLH
LYAIRALAKQSPKCLTCNLIKSGDVQQTYFSATFNDNNHIVITSLGPGIP
TTHIYEWKYENSQVVISKVLDWETNESLRAKLKGVALPSHKILTVDIDGG
FQAKVLLQLPPNLDTSGATKYPMLVDVYGGPDSYSVTNKWMVDWGTYLSS
NQSVIYAKIDGRGSGLRGESLLHAIYLKLGTVEISDQINVTQKLSTLFNY
IDPDHVGIWGWSYGGYAAAMALANDEAKVFKCAASIAPVTDWAYYDSIYT
ERYMGLPNTNELGYANSRLSTMAVKLRGKKYLLVHGTLDDNVHYQQAMIL
AKNLERQDILFKQISYADEDHGLSNVRPHLYHSLDRFFGECFASSRLMKS
AKASFLDH

BO10596.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
ome-PF 802 CG32145-PA 1..802 1..802 4185 100 Plus
ome-PG 1040 CG32145-PB 254..1040 16..802 4108 99.9 Plus
ome-PE 923 CG42280-PE 137..923 16..802 4108 99.9 Plus
ome-PH 784 CG42280-PH 1..784 19..802 4097 100 Plus
CG11034-PC 751 CG11034-PC 32..741 61..791 1041 33.5 Plus