Clone BO10614 Report

Search the DGRC for BO10614

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:106
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptAcon-RB
Protein status:BO10614.pep: validated full length
Sequenced Size:2395

Clone Sequence Records

BO10614.3prime Sequence

770 bp (733 high quality bases) assembled on 2006-04-19

> BO10614.3prime
ATGGTCTAGAAAGCTTGCCTGGGCCAGCTCCTTCATGCGGTTGAGAGCGC
TGCCGGCCTTGAACCAGCCGATCTGTAGGTCGTTCAGGGTGTGGTTAAGC
TTGATCCTCTCGACCTTGTCGCCATTCTTGATTTCGGCATCTACGGGCTT
TCCAGGCGCAAGGGATTTCAGGTTGAGCAGGGAGATTTTGCTCGTGGGCT
GGATCTTATCGTAATCAGCGGGATTGGCGAAGGTGAGAGGCAGAAGACCC
TGTTTCTTCAGGTTGGTCTCGTGGATACGGGCGAAGGACTTGACGATAAT
GGCACGACCACCAAGGTGACGGGGCTCCAAAGCGGCATGCTCGCGGGACG
AACCCTCGCCGTAGTTCTCATCGCCGACGGCCACCCACTTGATGCCGTTG
GCCTTGTAGTCGCGGGCTACGTCGGGAACTCCTCCCCAGCTACCGTTGCG
TTGGTTCTTGATGTTGTTCATCTCGTTGTTTTCGTAGTTGGTGGCTCCGA
TAAACATGTTGTTGGAGATGTTGTCCAAATGGCCACGGTACTTCAGCCAG
GGTCCGGCAGCGGAGATGTGGTCAGTGGTGCACTTTCCCTTAACCTTGAT
CAGCACAGTCAGATCGGTCAGATCCTGGCCGTTCCACTTGTCAAAAGGCT
CCAGCAGCTGCAGACGCGTCGACTTGGGGTCGACAGCCACCTTGACATTT
TCGCCGCTGGGTGGGGGAGCAGTGTAGGTGTCCTGGGCGGGATCGAAACC
CTTGGGGGGCAGCTCGTCGC

BO10614.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG9244-PB 2364 Acon-RB 1610..2361 770..19 3710 99.7 Minus
CG4706-PA 2352 CG4706-RA 2047..2103 303..247 185 92.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 3102 CG9244-RF 1812..2563 770..19 3730 99.7 Minus
Acon-RE 3022 CG9244-RE 1731..2482 770..19 3730 99.7 Minus
Acon-RD 2854 CG9244-RD 1731..2482 770..19 3730 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:28:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21171888..21172398 715..205 2525 99.6 Minus
2L 23513712 2L 21172458..21172645 206..19 940 100 Minus
3R 32079331 3R 11138831..11139579 770..22 745 73.3 Minus
2L 23513712 2L 21171767..21171828 770..709 280 96.8 Minus
Blast to na_te.dros performed 2015-02-10 17:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6413..6485 520..448 122 63 Minus

BO10614.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:44:04 Download gff for BO10614.3prime
Subject Subject Range Query Range Percent Splice Strand
Acon-PB 1610..2364 15..770 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:59:19 Download gff for BO10614.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9244-PB 1610..2364 15..770 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:21:32 Download gff for BO10614.3prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 1731..2485 15..770 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:57:03 Download gff for BO10614.3prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 1731..2485 15..770 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:57:03 Download gff for BO10614.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 21171767..21171828 709..770 96 -> Minus
2L 21171895..21172398 205..708 100 -> Minus
2L 21172460..21172648 15..204 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:21:32 Download gff for BO10614.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21171767..21171828 709..770 96 -> Minus
arm_2L 21171895..21172398 205..708 100 -> Minus
arm_2L 21172460..21172648 15..204 98   Minus

BO10614.5prime Sequence

817 bp (783 high quality bases) assembled on 2006-04-19

> BO10614.5prime
GAAGTTATCAGTCGACATGGCTGCGAGATTGATGAACGCCCAGGCACAGG
TGTGTCGACTGGGCAAGCATGTTGCGTCCGAAGCCACAGTGGTGCGTCAG
TTCCACGCCTCCTGCTACACCGCCTCCAAAGTGGCTCTGTCCAAGTTCGA
CTCGGACGTCTACCTGCCGTACGAGAAGCTGAACAAGCGCCTGGAAGTGG
TGCGCGGTCGCTTGAACCGCCCACTGACTCTCTCCGAGAAGGTGCTGTAC
TCGCATCTGGACGATCCCGCAAACCAGGACATCGTGCGCGGTACTTCGTA
CCTGCGTCTTCGCCCCGATCGTGTGGCTATGCAGGATGCCACTGCACAGA
TGGCTCTGCTTCAGTTTATCTCCTCCGGACTGAAAAAGGTGGCTGTGCCC
TCCACTGTTCACTGTGATCATTTAATCGAGGCCCAGATTGGTGGACCCAA
GGATTTAGCCCGTGCCAAGGACCTGAACAAGGAAGTGTACGATTTCTTGG
CCAGCACCTGTGCAAAGTACGGATTGGGCTTCTGGAAGCCAGGCAGCGGA
ATCATCCATCAGATCATTCTGGAGAACTACGCTTTCCCCGGCCTGCTGAT
GATTGGTACTGACTCACACACCCCCAACGGTGGTGGCTTGGGTGGCCTGT
GCATTGGCGTTGGTGGTGCTGATGCCGTCGATGTGATGGCCGACATCCCC
TGGGAGCTGAAGTGCCCCAAGGTGATTGGTGTCAATTTGACTGGCAAGAT
CAGCGGCTGGACCTCGCCCAAGGATGTTATCCTGAAGGTTGCCGATATCC
TGACCGTCAAGGGAGGC

BO10614.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG9244-PB 2364 Acon-RB 1..801 17..817 4005 100 Plus
CG4706-PA 2352 CG4706-RA 595..647 638..690 165 92.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 3102 CG9244-RF 202..1003 16..817 4010 100 Plus
Acon-RE 3022 CG9244-RE 121..922 16..817 4010 100 Plus
Acon-RD 2854 CG9244-RD 121..922 16..817 4010 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21170188..21170958 47..817 3855 100 Plus
3R 32079331 3R 11137525..11138024 317..816 910 78.8 Plus
Blast to na_te.dros performed 2015-02-12 01:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 5965..6050 126..41 114 62.1 Minus

BO10614.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:44:05 Download gff for BO10614.5prime
Subject Subject Range Query Range Percent Splice Strand
Acon-PB 1..801 17..817 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 03:59:20 Download gff for BO10614.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9244-PB 1..801 17..817 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:19:50 Download gff for BO10614.5prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 117..922 13..817 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:20:25 Download gff for BO10614.5prime
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 117..922 13..817 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 05:20:25 Download gff for BO10614.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21168767..21168804 13..49 97 -> Plus
2L 21170191..21170958 50..817 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:19:50 Download gff for BO10614.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21168767..21168804 13..49 97 -> Plus
arm_2L 21170191..21170958 50..817 100   Plus

BO10614.complete Sequence

2395 bp (2395 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631814

> BO10614.complete
GAAGTTATCAGTCGACATGGCTGCGAGATTGATGAACGCCCAGGCACAGG
TGTGTCGACTGGGCAAGCATGTTGCGTCCGAAGCCACAGTGGTGCGTCAG
TTCCACGCCTCCTGCTACACCGCCTCCAAAGTGGCTCTGTCCAAGTTCGA
CTCGGACGTCTACCTGCCGTACGAGAAGCTGAACAAGCGCCTGGAAGTGG
TGCGCGGTCGCTTGAACCGCCCACTGACTCTCTCCGAGAAGGTGCTGTAC
TCGCATCTGGACGATCCCGCAAACCAGGACATCGTGCGCGGTACTTCGTA
CCTGCGTCTTCGCCCCGATCGTGTGGCTATGCAGGATGCCACTGCACAGA
TGGCTCTGCTTCAGTTTATCTCCTCCGGACTGAAAAAGGTGGCTGTGCCC
TCCACTGTTCACTGTGATCATTTAATCGAGGCCCAGATTGGTGGACCCAA
GGATTTAGCCCGTGCCAAGGACCTGAACAAGGAAGTGTACGATTTCTTGG
CCAGCACCTGTGCAAAGTACGGATTGGGCTTCTGGAAGCCAGGCAGCGGA
ATCATCCATCAGATCATTCTGGAGAACTACGCTTTCCCCGGCCTGCTGAT
GATTGGTACTGACTCACACACCCCCAACGGTGGTGGCTTGGGTGGCCTGT
GCATTGGCGTTGGTGGTGCTGATGCCGTCGATGTGATGGCCGACATCCCC
TGGGAGCTGAAGTGCCCCAAGGTGATTGGTGTCAATTTGACTGGCAAGAT
CAGCGGCTGGACCTCGCCCAAGGATGTTATCCTGAAGGTTGCCGATATCC
TGACCGTCAAGGGAGGCACCGGTGCCATCATTGAGTATCACGGCAAGGGT
GTTGACTCTATCTCTTGTACAGGCATGGCCACCATCTGCAACATGGGTGC
TGAGATCGGAGCTACCACCTCTCTGTTCCCCTTCAACCAGCGCATGGCTG
ATTACCTGAAATCGACAGGCCGTGCTGGCATTGCCTCCGAAGCCCAGAAG
TACCAGGCCAAGATTCTGTCCGCTGACAAGAACTGCGAGTACGATGAGCT
GATTGAAATCAACCTAGACACCCTGGAGCCCCATGTTAACGGACCATTCA
CTCCCGATTTGGGCCATCCCATCAGCAAGCTAGGCGAGAACTCGAAGAAG
AACGGGTACCCTATGGACATCCGTGTAGGTCTTATTGGCTCTTGCACCAA
CTCTTCGTATGAGGACATGGGTCGCTGCGCCAGCATCGCCAAGGATGCCA
TGAGCCATGGCCTCAAGTCGAAGATTCCTTTCAATGTGACTCCCGGATCA
GAGCAGATCCGTGCCACCATCGAGCGCGACGGCATCTCTGAGGTGTTCGA
CAAGTTCGGCGGTACCGTTCTGGCCAACGCTTGCGGTCCCTGCATTGGAC
AGTGGGATCGTAAGGACGTTAAGAAGGGCGACAAGAACACCATTGTCACC
TCCTACAACCGAAACTTTACTGGCAGGAACGACGCTAACCCGGCCACCCA
TTGCTTTGTCACTAGTCCCGAGTTGGTCACCGCTCTGTCCATCGCCGGTC
GTCTGGACTTCAACCCGCTGACCGACGAGCTTACTGGTGCTGATGGCAAG
AAGTTCAAGCTCAAGGCTCCCTTCGGCGACGAGCTGCCCGCCAAGGGTTT
CGATCCCGGCCAGGACACCTACACTGCTCCCCCACCCAGCGGCGAAAATG
TCAAGGTGGCTGTCGACCCCAAGTCGACGCGTCTGCAGCTGCTGGAGCCT
TTTGACAAGTGGAACGGCCAGGATCTGACCGATCTGACTGTGCTGATCAA
GGTTAAGGGAAAGTGCACCACTGACCACATCTCCGCTGCCGGACCCTGGC
TGAAGTACCGTGGCCATTTGGACAACATCTCCAACAACATGTTTATCGGA
GCCACCAACTACGAAAACAACGAGATGAACAACATCAAGAACCAACGCAA
CGGTAGCTGGGGAGGAGTTCCCGACGTAGCCCGCGACTACAAGGCCAACG
GCATCAAGTGGGTGGCCGTCGGCGATGAGAACTACGGCGAGGGTTCGTCC
CGCGAGCATGCCGCTTTGGAGCCCCGTCACCTTGGTGGTCGTGCCATTAT
CGTCAAGTCCTTCGCCCGTATCCACGAGACCAACCTGAAGAAACAGGGTC
TTCTGCCTCTCACCTTCGCCAATCCCGCTGATTACGATAAGATCCAGCCC
ACGAGCAAAATCTCCCTGCTCAACCTGAAATCCCTTGCGCCTGGAAAGCC
CGTAGATGCCGAAATCAAGAATGGCGACAAGGTCGAGAGGATCAAGCTTA
ACCACACCCTGAACGACCTACAGATCGGCTGGTTCAAGGCCGGCAGCGCT
CTCAACCGCATGAAGGAGCTGGCCCAGGCAAGCTTTCTAGACCAT

BO10614.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 2364 CG9244-PF 1..2361 17..2377 11805 100 Plus
Acon-RE 2364 CG9244-PE 1..2361 17..2377 11805 100 Plus
Acon-RD 2364 CG9244-PD 1..2361 17..2377 11805 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-RF 3102 CG9244-RF 202..2563 16..2377 11810 100 Plus
Acon-RE 3022 CG9244-RE 121..2482 16..2377 11810 100 Plus
Acon-RD 2854 CG9244-RD 121..2482 16..2377 11810 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:13:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21170188..21171828 47..1687 8205 100 Plus
2L 23513712 2L 21171888..21172398 1681..2191 2525 99.6 Plus
3R 32079331 3R 11138245..11139579 1040..2374 1560 74.5 Plus
3R 32079331 3R 11137525..11138155 317..947 1055 77.8 Plus
2L 23513712 2L 21172458..21172645 2190..2377 940 100 Plus
Blast to na_te.dros performed 2014-11-27 10:13:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6413..6485 1876..1948 122 63 Plus

BO10614.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:57:25 Download gff for BO10614.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 1..2364 17..2381 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:14:47 Download gff for BO10614.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 152..2520 13..2381 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:06:08 Download gff for BO10614.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 122..2482 17..2379 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:57:25 Download gff for BO10614.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RB 412..2780 13..2381 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:16:20 Download gff for BO10614.complete
Subject Subject Range Query Range Percent Splice Strand
Acon-RD 122..2482 17..2379 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:16:20 Download gff for BO10614.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21168772..21168804 17..49 100 -> Plus
2L 21170191..21171828 50..1687 100 -> Plus
2L 21171895..21172398 1688..2191 100 -> Plus
2L 21172460..21172645 2192..2379 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:06:08 Download gff for BO10614.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21168772..21168804 17..49 100 -> Plus
arm_2L 21170191..21171828 50..1687 100 -> Plus
arm_2L 21171895..21172398 1688..2191 100 -> Plus
arm_2L 21172460..21172645 2192..2379 98   Plus

BO10614.pep Sequence

Translation from 16 to 2395

> BO10614.pep
MAARLMNAQAQVCRLGKHVASEATVVRQFHASCYTASKVALSKFDSDVYL
PYEKLNKRLEVVRGRLNRPLTLSEKVLYSHLDDPANQDIVRGTSYLRLRP
DRVAMQDATAQMALLQFISSGLKKVAVPSTVHCDHLIEAQIGGPKDLARA
KDLNKEVYDFLASTCAKYGLGFWKPGSGIIHQIILENYAFPGLLMIGTDS
HTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVNLTGKISGWTS
PKDVILKVADILTVKGGTGAIIEYHGKGVDSISCTGMATICNMGAEIGAT
TSLFPFNQRMADYLKSTGRAGIASEAQKYQAKILSADKNCEYDELIEINL
DTLEPHVNGPFTPDLGHPISKLGENSKKNGYPMDIRVGLIGSCTNSSYED
MGRCASIAKDAMSHGLKSKIPFNVTPGSEQIRATIERDGISEVFDKFGGT
VLANACGPCIGQWDRKDVKKGDKNTIVTSYNRNFTGRNDANPATHCFVTS
PELVTALSIAGRLDFNPLTDELTGADGKKFKLKAPFGDELPAKGFDPGQD
TYTAPPPSGENVKVAVDPKSTRLQLLEPFDKWNGQDLTDLTVLIKVKGKC
TTDHISAAGPWLKYRGHLDNISNNMFIGATNYENNEMNNIKNQRNGSWGG
VPDVARDYKANGIKWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFA
RIHETNLKKQGLLPLTFANPADYDKIQPTSKISLLNLKSLAPGKPVDAEI
KNGDKVERIKLNHTLNDLQIGWFKAGSALNRMKELAQASFLDH

BO10614.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
Acon-PF 787 CG9244-PF 1..787 1..787 4141 100 Plus
Acon-PE 787 CG9244-PE 1..787 1..787 4141 100 Plus
Acon-PD 787 CG9244-PD 1..787 1..787 4141 100 Plus
Acon-PB 787 CG9244-PB 1..787 1..787 4141 100 Plus
CG4706-PA 783 CG4706-PA 4..776 14..786 3285 79.3 Plus