Clone BO10631 Report

Search the DGRC for BO10631

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:106
Well:31
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO10631.pep:
Sequenced Size:874

Clone Sequence Records

BO10631.3prime Sequence

872 bp (866 high quality bases) assembled on 2006-04-19

> BO10631.3prime
ATGGTCTAGAAAGCTTGCGGCACCCATCATTAGCTGCTCGAAGGCATCCT
CCACATTGCTCTCGTCCAGCAGATTGAGATTCGCGATGTGCGGCATGGTG
GCACTGCGACTGAGTGCAGCACCACCACCAATGCCACCAACACCACCACC
ACGCACCACCATGCCCAAACCGGCGGTGGAAACGTTACCATTCGATGTGG
TGGTCAACGAACTCAATGATTTTCGAGCTGCCGCCGAAAGTTTTTCACTC
GTTTTCGTGCGATTAATGGCCGATTTTCGACTTGAGGTCGTTGTCGTCAT
CGATGTTCGTAACTCCTCCACTTGGCCGCCAGTTGGTGACTTCTGGCCGG
AGAAGTAGGCAGCCACCGTACGCTGTTTCTCGCTGACCTGGGCCTTATCA
ATGCCCGCTTCGTAGAGTTTGGGCACGGCGAGTGAGTGTCCCGATTTGGT
GCGTCTCAGTTCGCCTGGAGAACCGGGCTGGTTGTATTTGGCCGGACTTG
GACCCGCAGTCTGTTGCAGCTGGCAAATTTGGTTCCACGAATCGCACTTG
CTCAATCGATTCACCCTGGAACCCGATTGCGTACCCTGGTGAGAATCCTC
CTCGTGATTTCGCCTGCTCATCGATGTAAAGGCGCTCACATTGTTGAACA
CTATGTTGTGGGGTATCTCGTCTTCGGGCGGAACTTGTGGCTGTGGTGTC
GCCGGGGTTTCCACAATACTTGGCTTGATTTGCTGATGTTGTTGCTGGTG
ATGTTGCTGTTGCACCACTGTGGTGCTCCTTACTGAGGTACTGCTGGTGG
TGGTGCTATTGCTATTGCCCTGCTTGTTCAGCTGCGGACTCTGGTACGAA
TTGGGCATGTCGACTGATAACT

BO10631.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 14:07:03 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG34417-RU 17577 CG34417-RU 14664..15505 860..19 4210 100 Minus
CG34417-RX 17271 CG34417-RX 14393..15234 860..19 4210 100 Minus
CG34417-RW 17173 CG34417-RW 14042..14883 860..19 4210 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:20:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6582507..6583348 860..19 4210 100 Minus
Blast to na_te.dros performed 2015-02-10 22:20:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6897 827..654 212 62.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6895 845..685 202 64.3 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2416 837..731 201 68.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6970 837..664 185 63.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2296..2429 866..730 181 64 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6916 847..730 175 64.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2410 842..731 174 64.3 Minus
roo 9092 roo DM_ROO 9092bp 1036..1183 858..713 168 64.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6844 809..685 161 62.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2370..2478 837..732 158 64.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2884..2981 828..730 141 64.4 Minus
roo 9092 roo DM_ROO 9092bp 1030..1135 827..730 140 66 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2699..2827 872..731 139 62.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6808 762..685 137 67.1 Minus
roo 9092 roo DM_ROO 9092bp 1059..1137 761..686 135 67.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2408 780..685 133 65 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6775 780..730 133 77.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2622..2663 762..725 119 83.3 Minus
gypsy11 4428 gypsy11 GYPSY11 4428bp 980..1022 763..721 116 74.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1527..1558 762..731 115 84.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1541..1593 763..717 115 77.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2350 762..731 115 84.4 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2597..2637 763..723 115 75.6 Minus
TART-C 11124 TART-C TARTC 11124bp 9175..9216 772..731 111 73.8 Minus

BO10631.3prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:47:41 Download gff for BO10631.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34417-RL 14303..15157 15..872 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:03:26 Download gff for BO10631.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34417-RW 14032..14886 15..872 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:03:26 Download gff for BO10631.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6582497..6583351 15..872 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:47:41 Download gff for BO10631.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6476530..6477384 15..872 99   Minus

BO10631.5prime Sequence

725 bp (723 high quality bases) assembled on 2006-04-19

> BO10631.5prime
GAAGTTATCAGTCGACATGCCCAATTCGTACCAGAGTCCGCAGCTGAACA
AGCAGGGCAATAGCAATAGCACCACCACCAGCAGTACCTCAGTAAGGAGC
ACCACAGTGGTGCAACAGCAACATCACCAGCAACAACATCAGCAAATCAA
GCCAAGTATTGTGGAAACCCCGGCGACACCACAGCCACAAGTTCCGCCCG
AAGACGAGATACCCCACAACATAGTGTTCAACAATGTGAGCGCCTTTACA
TCGATGAGCAGGCGAAATCACGAGGAGGATTCTCACCAGGGTACGCAATC
GGGTTCCAGGGTGAATCGATTGAGCAAGTGCGATTCGTGGAACCAAATTT
GCCAGCTGCAACAGACTGCGGGTCCAAGTCCGGCCAAATACAACCAGCCC
GGTTCTCCAGGCGAACTGAGACGCACCAAATCGGGACACTCACTCGCCGT
GCCCAAACTCTACGAAGCGGGCATTGATAAGGCCCAGGTCAGCGAGAAAC
AGCGTACGGTGGCTGCCTACTTCTCCGGCCAGAAGTCACCAACTGGCGGC
CAAGTGGAGGAGTTACGAACATCGATGACGACAACGACCTCAAGTCGAAA
ATCGGCCATTAATCGCACGAAAACGAGTGAAAAACTTTCGGCGGCAGCTC
GAAAATCATTGAGTTCGTTGACCACCACATCGAATGGTAACGTTTCCACC
GCCGGTTTGGGCATGGTGGTGCGTG

BO10631.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 14:07:04 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:21:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG34417-RU 17577 CG34417-RU 14664..15374 15..725 3555 100 Plus
CG34417-RT 16863 CG34417-RT 14664..15374 15..725 3555 100 Plus
CG34417-RX 17271 CG34417-RX 14393..15103 15..725 3555 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6582507..6583217 15..725 3555 100 Plus
Blast to na_te.dros performed 2015-02-12 11:21:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6897 48..221 212 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6895 30..190 202 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2416 38..144 201 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6970 38..211 185 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2296..2429 9..145 181 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6916 28..145 175 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2410 33..144 174 64.3 Plus
roo 9092 roo DM_ROO 9092bp 1036..1183 17..162 168 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6844 66..190 161 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2370..2478 38..143 158 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2698..2827 2..144 144 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2884..2981 47..145 141 64.4 Plus
roo 9092 roo DM_ROO 9092bp 1030..1135 48..145 140 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6808 113..190 137 67.1 Plus
roo 9092 roo DM_ROO 9092bp 1059..1137 114..189 135 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2408 95..190 133 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6775 95..145 133 77.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2622..2663 113..150 119 83.3 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 980..1022 112..154 116 74.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1527..1558 113..144 115 84.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1541..1593 112..158 115 77.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2350 113..144 115 84.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2597..2637 112..152 115 75.6 Plus
TART-C 11124 TART-C TARTC 11124bp 9175..9216 103..144 111 73.8 Plus

BO10631.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:14:35 Download gff for BO10631.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34417-RJ 14655..15374 4..725 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:36:54 Download gff for BO10631.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34417-RX 14384..15103 4..725 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:36:54 Download gff for BO10631.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6582498..6583217 4..725 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:14:35 Download gff for BO10631.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6476531..6477250 4..725 99   Plus

BO10631.complete Sequence

874 bp (874 high quality bases) assembled on 2006-03-25

> BO10631.complete
GAAGTTATCAGTCGACATGCCCAATTCGTACCAGAGTCCGCAGCTGAACA
AGCAGGGCAATAGCAATAGCACCACCACCAGCAGTACCTCAGTAAGGAGC
ACCACAGTGGTGCAACAGCAACATCACCAGCAACAACATCAGCAAATCAA
GCCAAGTATTGTGGAAACCCCGGCGACACCACAGCCACAAGTTCCGCCCG
AAGACGAGATACCCCACAACATAGTGTTCAACAATGTGAGCGCCTTTACA
TCGATGAGCAGGCGAAATCACGAGGAGGATTCTCACCAGGGTACGCAATC
GGGTTCCAGGGTGAATCGATTGAGCAAGTGCGATTCGTGGAACCAAATTT
GCCAGCTGCAACAGACTGCGGGTCCAAGTCCGGCCAAATACAACCAGCCC
GGTTCTCCAGGCGAACTGAGACGCACCAAATCGGGACACTCACTCGCCGT
GCCCAAACTCTACGAAGCGGGCATTGATAAGGCCCAGGTCAGCGAGAAAC
AGCGTACGGTGGCTGCCTACTTCTCCGGCCAGAAGTCACCAACTGGCGGC
CAAGTGGAGGAGTTACGAACATCGATGACGACAACGACCTCAAGTCGAAA
ATCGGCCATTAATCGCACGAAAACGAGTGAAAAACTTTCGGCGGCAGCTC
GAAAATCATTGAGTTCGTTGACCACCACATCGAATGGTAACGTTTCCACC
GCCGGTTTGGGCATGGTGGTGCGTGGTGGTGGTGTTGGTGGCATTGGTGG
TGGTGCTGCACTCAGTCGCAGTGCCACCATGCCGCACATCGCGAATCTCA
ATCTGCTGGACGAGAGCAATGTGGAGGATGCCTTCGAGCAGCTAATGATG
GGTGCCGCAAGCTTTCTAGACCAT

BO10631.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34417-RU 14940 CG34417-PU 14096..14937 15..856 4210 100 Plus
CG34417-RX 14778 CG34417-PX 13934..14775 15..856 4210 100 Plus
CG34417-RW 14427 CG34417-PW 13583..14424 15..856 4210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG34417-RU 17577 CG34417-RU 14664..15505 15..856 4210 100 Plus
CG34417-RX 17271 CG34417-RX 14393..15234 15..856 4210 100 Plus
CG34417-RW 17173 CG34417-RW 14042..14883 15..856 4210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6582507..6583348 15..856 4210 100 Plus
Blast to na_te.dros performed 2014-11-26 15:45:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6897 48..221 212 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6730..6895 30..190 202 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2416 38..144 201 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6970 38..211 185 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2296..2429 9..145 181 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6916 28..145 175 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2410 33..144 174 64.3 Plus
roo 9092 roo DM_ROO 9092bp 1036..1183 17..162 168 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6844 66..190 161 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2370..2478 38..143 158 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2698..2827 2..144 144 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2884..2981 47..145 141 64.4 Plus
roo 9092 roo DM_ROO 9092bp 1030..1135 48..145 140 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6808 113..190 137 67.1 Plus
roo 9092 roo DM_ROO 9092bp 1059..1137 114..189 135 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6775 95..145 133 77.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2311..2408 95..190 133 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2622..2663 113..150 119 83.3 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 980..1022 112..154 116 74.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1527..1558 113..144 115 84.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1541..1593 112..158 115 77.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2350 113..144 115 84.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2597..2637 112..152 115 75.6 Plus
TART-C 11124 TART-C TARTC 11124bp 9175..9216 103..144 111 73.8 Plus

BO10631.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:16 Download gff for BO10631.complete
Subject Subject Range Query Range Percent Splice Strand
CG34417-RH 14087..14940 4..860 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:42 Download gff for BO10631.complete
Subject Subject Range Query Range Percent Splice Strand
CG34417-RH 14644..15497 4..860 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:27 Download gff for BO10631.complete
Subject Subject Range Query Range Percent Splice Strand
CG34417-RL 14315..15154 17..858 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:16 Download gff for BO10631.complete
Subject Subject Range Query Range Percent Splice Strand
CG34417-RH 14644..15497 4..860 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:45 Download gff for BO10631.complete
Subject Subject Range Query Range Percent Splice Strand
CG34417-RW 14044..14883 17..858 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:45 Download gff for BO10631.complete
Subject Subject Range Query Range Percent Splice Strand
X 6582509..6583348 17..858 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:27 Download gff for BO10631.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6476542..6477381 17..858 99   Plus

BO10631.pep Sequence

Translation from 16 to 874

> BO10631.pep
MPNSYQSPQLNKQGNSNSTTTSSTSVRSTTVVQQQHHQQQHQQIKPSIVE
TPATPQPQVPPEDEIPHNIVFNNVSAFTSMSRRNHEEDSHQGTQSGSRVN
RLSKCDSWNQICQLQQTAGPSPAKYNQPGSPGELRRTKSGHSLAVPKLYE
AGIDKAQVSEKQRTVAAYFSGQKSPTGGQVEELRTSMTTTTSSRKSAINR
TKTSEKLSAAARKSLSSLTTTSNGNVSTAGLGMVVRGGGVGGIGGGAALS
RSATMPHIANLNLLDESNVEDAFEQLMMGAASFLDH

BO10631.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG34417-PW 4808 CG34417-PW 4529..4808 1..280 1428 100 Plus
CG34417-PL 4862 CG34417-PL 4583..4862 1..280 1428 100 Plus
CG34417-PX 4925 CG34417-PX 4646..4925 1..280 1428 100 Plus
CG34417-PU 4979 CG34417-PU 4700..4979 1..280 1428 100 Plus
CG34417-PJ 4979 CG34417-PJ 4700..4979 1..280 1428 100 Plus