Clone BO10645 Report

Search the DGRC for BO10645

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:106
Well:45
Vector:pDNR-Dual
Associated Gene/Transcriptl(2)08717-RA
Protein status:BO10645.pep: validated full length
Sequenced Size:1525

Clone Sequence Records

BO10645.3prime Sequence

924 bp (817 high quality bases) assembled on 2006-04-19

> BO10645.3prime
ATGGTCTAGAAAGCTTGCTTTGACCTGGCCATTGGGCGCCAGAGGCGTGC
CCTGCTCCGCATCCTCCTTATTGTCCCGTGGGGAGTCCCACCATTGCACC
TCCGTGCGTCCAAATATGACGAAGAGAAGATTGCCCAAGAAGTAGAAGGC
GGCAGCCAGCAGGAACACCAATCGCCACTCAGTTACGCTTGTCTCATCGA
CGACAATCTGTCCCACGATCACTGGTGCGATTCCACTCATCACGTTTGCC
GCACAATTCGTAATGCCCATCAGGGTTCCGGCGTAATTCGGGGACAGATC
GATGTGGTTCACCTGGAAGCCCAGATAGGTGGCTCCGCTGATTCCCACCG
TTAGGGTGAGCAGTGTTACCGCCAGTGGAGCATTATCCGCCGGCACATAA
CCTAGCGCGATCAGCGAGAGCATAGGTATCCAATGGCCAATGCTGTTGAA
AATCTTGCGGTTGAAGGACAGAGACATGCCTTCCTTCTTTTGGAGCACTT
TGGATAGCCAGACGAAAAAGAAGCTGAGGAGCAGCATCACCATGTAGGGT
AGGGAGGAGAGCAGCGCACCCTTCTTGATGTCCACGTGGTAGATCTTCTT
CATGTACGTGGGAATCTGCATGAGCAGCAGCCAGTAACCGAAAATGTGGG
TGCAGTGCACCACCAGCAGAGACAGGAAGGGCAGGGAACTAAAGATGGCC
TTCCAGGGCGTGGGTGCCAGTTTCTCGGCGGATTGCATCTTGCCATCGCT
CCGCGAATCCGTAATGTACTTCAGCTCTCCGGGCGAAATCAGACGGTGTT
CCTCCGGCGTGCTGGCCGAGAATAGGTACCAGAAAACCATCCAAATAAAG
CCGCATGCTCCGCCAAATAGAAGATACTCGGCCAGCCAAAGACGGAGTCG
GGAATGAAAACGCTAGTGGCCAGC

BO10645.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15095-PB 1494 l(2)08717-RB 646..1491 864..19 4230 100 Minus
CG15095-PA 1494 l(2)08717-RA 646..1491 864..19 4230 100 Minus
CG15095-PB 1494 l(2)08717-RB 585..646 924..863 235 95.1 Minus
CG15095-PA 1494 l(2)08717-RA 585..646 924..863 235 95.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 17:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)08717-RC 2337 CG15095-RC 924..1830 924..19 4465 99.6 Minus
l(2)08717-RA 2048 CG15095-RA 924..1830 924..19 4465 99.6 Minus
l(2)08717-RB 2999 CG15095-RB 1875..2781 924..19 4465 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 17:14:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18797716..18798448 193..924 3570 99.5 Plus
2R 25286936 2R 18797482..18797657 19..194 880 100 Plus
2R 25286936 2R 18795124..18795209 248..333 250 86 Plus
Blast to na_te.dros performed on 2015-02-06 17:14:46 has no hits.

BO10645.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:45:06 Download gff for BO10645.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15095-PB 585..1494 18..924 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:00:37 Download gff for BO10645.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15095-PA 585..1494 18..924 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:30:45 Download gff for BO10645.3prime
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RB 1875..2787 13..924 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:27:27 Download gff for BO10645.3prime
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RB 1875..2787 13..924 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:27:27 Download gff for BO10645.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 18797488..18797655 25..192 100 <- Plus
2R 18797716..18798448 193..924 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:30:45 Download gff for BO10645.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14684993..14685160 25..192 100 <- Plus
arm_2R 14685221..14685953 193..924 99   Plus

BO10645.5prime Sequence

819 bp (817 high quality bases) assembled on 2006-04-19

> BO10645.5prime
GAAGTTATCAGTCGACATGACAACTGCATTGACCATGGTGAAAACGGGTG
GTAAATACGCCAACGAGAAATTCTTCGGGGTGAGGCATGTGCAGTGCATC
CTGTGCTTCTTCTGCCTCGCGATGAGCTACGCTTGGCGGGTGAACCTCAG
TGTGGCCCTGGTGGCCATGACGGACAACAGCACCTCCCTAGCTCAGAACA
ACACCAATACCGGAGTGGCGCCAAGCGAACCCGGTTTTGATTTCTTTAAT
TCCGAGCGCTACTACAACTTCACCCAGAAGGAGAAGGGCAACCTGCAGGC
CAGTTTCTTCTTTGGCTACATCGTGACCCAAGTGCCAGGTGGTTATATCG
CCCAGCGCTATGGAGCCAAGACCATGCTGATGTACGGATTGGGTATAGCC
GCTTTGATCACGATGCTCTCGCCGATGTCCCTGCAATTCGGATGGGTCGC
CCTTGCCGTGATGCGATTCGTGATGGGCCTGGCCCAGGGTGCAGTACATC
CGGCCACGCATGCGCTTTTGGCCAAGTGGTCGCCCGCGGATGAGCGAGGA
ATGCTGGGAACACTCTGCTACTCGGGCGCCCAGTTCGGAACGGTGGTGAT
GCTGGCCACTAGCGGTTTCATTGCCGACTCCGTCTTGGGCTGGCCGAGTA
TCTTCTATTTGGGCGGAGCATGCGGCTTTATTTGGATGGTTTTCTGGTAC
CTATTCTCGGCCAGCACGCCGGAGGAACACCGTCTGATTTCGCCCGGAGA
GCTGAAGTACATTACGGATTCGCGGAGCGATGGCAAGATGCAATCCGCCG
AGAAACTGGCACCCACGCC

BO10645.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG15095-PB 1494 l(2)08717-RB 1..803 17..819 4015 100 Plus
CG15095-PA 1494 l(2)08717-RA 1..803 17..819 4015 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)08717-RC 2337 CG15095-RC 338..1142 15..819 4025 100 Plus
l(2)08717-RA 2048 CG15095-RA 338..1142 15..819 4025 100 Plus
l(2)08717-RB 2999 CG15095-RB 1289..2093 15..819 4025 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:31:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18798230..18798794 819..255 2825 100 Minus
2R 25286936 2R 18799073..18799264 256..65 960 100 Minus
2R 25286936 2R 18802018..18802068 65..15 255 100 Minus
Blast to na_te.dros performed on 2015-02-11 18:31:35 has no hits.

BO10645.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:45:07 Download gff for BO10645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15095-PB 1..803 17..819 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:00:39 Download gff for BO10645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15095-PA 1..803 17..819 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:35:39 Download gff for BO10645.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RB 1286..2093 9..819 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:02:16 Download gff for BO10645.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RB 1286..2093 9..819 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:02:16 Download gff for BO10645.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18798230..18798792 257..819 100 <- Minus
2R 18799073..18799263 66..256 100 <- Minus
2R 18802018..18802071 9..65 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:35:39 Download gff for BO10645.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14685735..14686297 257..819 100 <- Minus
arm_2R 14686578..14686768 66..256 100 <- Minus
arm_2R 14689523..14689576 9..65 94   Minus

BO10645.complete Sequence

1525 bp (1525 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631824

> BO10645.complete
GAAGTTATCAGTCGACATGACAACTGCATTGACCATGGTGAAAACGGGTG
GTAAATACGCCAACGAGAAATTCTTCGGGGTGAGGCATGTGCAGTGCATC
CTGTGCTTCTTCTGCCTCGCGATGAGCTACGCTTGGCGGGTGAACCTCAG
TGTGGCCCTGGTGGCCATGACGGACAACAGCACCTCCCTAGCTCAGAACA
ACACCAATACCGGAGTGGCGCCAAGCGAACCCGGTTTTGATTTCTTTAAT
TCCGAGCGCTACTACAACTTCACCCAGAAGGAGAAGGGCAACCTGCAGGC
CAGTTTCTTCTTTGGCTACATCGTGACCCAAGTGCCAGGTGGTTATATCG
CCCAGCGCTATGGAGCCAAGACCATGCTGATGTACGGATTGGGTATAGCC
GCTTTGATCACGATGCTCTCGCCGATGTCCCTGCAATTCGGATGGGTCGC
CCTTGCCGTGATGCGATTCGTGATGGGCCTGGCCCAGGGTGCAGTACATC
CGGCCACGCATGCGCTTTTGGCCAAGTGGTCGCCCGCGGATGAGCGAGGA
ATGCTGGGAACACTCTGCTACTCGGGCGCCCAGTTCGGAACGGTGGTGAT
GCTGGCCACTAGCGGTTTCATTGCCGACTCCGTCTTGGGCTGGCCGAGTA
TCTTCTATTTGGGCGGAGCATGCGGCTTTATTTGGATGGTTTTCTGGTAC
CTATTCTCGGCCAGCACGCCGGAGGAACACCGTCTGATTTCGCCCGGAGA
GCTGAAGTACATTACGGATTCGCGGAGCGATGGCAAGATGCAATCCGCCG
AGAAACTGGCACCCACGCCCTGGAAGGCCATCTTTAGTTCCCTGCCCTTC
CTGTCTCTGCTGGTGGTGCACTGCACCCACATTTTCGGTTACTGGCTGCT
GCTCATGCAGATTCCCACGTACATGAAGAAGATCTACCACGTGGACATCA
AGAAGGGTGCGCTGCTCTCCTCCCTACCCTACATGGTGATGCTGCTCCTC
AGCTTCTTTTTCGTCTGGCTATCCAAAGTGCTCCAAAAGAAGGAAGGCAT
GTCTCTGTCCTTCAACCGCAAGATTTTCAACAGCATTGGCCATTGGATAC
CTATGCTCTCGCTGATCGCGCTAGGTTATGTGCCGGCGGATAATGCTCCA
CTGGCGGTAACACTGCTCACCCTAACGGTGGGAATCAGCGGAGCCACCTA
TCTGGGCTTCCAGGTGAACCACATCGATCTGTCCCCGAATTACGCCGGAA
CCCTGATGGGCATTACGAATTGTGCGGCAAACGTGATGAGTGGAATCGCA
CCAGTGATCGTGGGACAGATTGTCGTCGATGAGACAAGCGTAACTGAGTG
GCGATTGGTGTTCCTGCTGGCTGCCGCCTTCTACTTCTTGGGCAATCTTC
TCTTCGTCATATTTGGACGCACGGAGGTGCAATGGTGGGACTCCCCACGG
GACAATAAGGAGGATGCGGAGCAGGGCACGCCTCTGGCGCCCAATGGCCA
GGTCAAAGCAAGCTTTCTAGACCAT

BO10645.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:02:27
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)08717-RC 1494 CG15095-PC 1..1491 17..1507 7455 100 Plus
l(2)08717-RA 1494 CG15095-PA 1..1491 17..1507 7455 100 Plus
l(2)08717-RB 1494 CG15095-PB 1..1491 17..1507 7455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)08717-RC 2337 CG15095-RC 338..1830 15..1507 7465 100 Plus
l(2)08717-RA 2048 CG15095-RA 338..1830 15..1507 7465 100 Plus
l(2)08717-RB 2999 CG15095-RB 1289..2781 15..1507 7465 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18797716..18798794 1333..255 5395 100 Minus
2R 25286936 2R 18799073..18799264 256..65 960 100 Minus
2R 25286936 2R 18797482..18797657 1507..1332 880 100 Minus
2R 25286936 2R 18802018..18802068 65..15 255 100 Minus
2R 25286936 2R 18795124..18795209 1278..1193 250 86 Minus
Blast to na_te.dros performed on 2014-11-28 01:02:26 has no hits.

BO10645.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:17 Download gff for BO10645.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RA 1..1494 17..1508 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:44 Download gff for BO10645.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RA 329..1830 9..1513 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:10 Download gff for BO10645.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RB 1291..2781 17..1509 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:17 Download gff for BO10645.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RA 329..1830 9..1513 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:42:54 Download gff for BO10645.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)08717-RB 1291..2781 17..1509 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:42:54 Download gff for BO10645.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18797480..18797655 1334..1509 98 <- Minus
2R 18797716..18798792 257..1333 100 <- Minus
2R 18799073..18799263 66..256 100 <- Minus
2R 18802018..18802066 17..65 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:10 Download gff for BO10645.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14684985..14685160 1334..1509 98 <- Minus
arm_2R 14685221..14686297 257..1333 100 <- Minus
arm_2R 14686578..14686768 66..256 100 <- Minus
arm_2R 14689523..14689571 17..65 100   Minus

BO10645.pep Sequence

Translation from 16 to 1525

> BO10645.pep
MTTALTMVKTGGKYANEKFFGVRHVQCILCFFCLAMSYAWRVNLSVALVA
MTDNSTSLAQNNTNTGVAPSEPGFDFFNSERYYNFTQKEKGNLQASFFFG
YIVTQVPGGYIAQRYGAKTMLMYGLGIAALITMLSPMSLQFGWVALAVMR
FVMGLAQGAVHPATHALLAKWSPADERGMLGTLCYSGAQFGTVVMLATSG
FIADSVLGWPSIFYLGGACGFIWMVFWYLFSASTPEEHRLISPGELKYIT
DSRSDGKMQSAEKLAPTPWKAIFSSLPFLSLLVVHCTHIFGYWLLLMQIP
TYMKKIYHVDIKKGALLSSLPYMVMLLLSFFFVWLSKVLQKKEGMSLSFN
RKIFNSIGHWIPMLSLIALGYVPADNAPLAVTLLTLTVGISGATYLGFQV
NHIDLSPNYAGTLMGITNCAANVMSGIAPVIVGQIVVDETSVTEWRLVFL
LAAAFYFLGNLLFVIFGRTEVQWWDSPRDNKEDAEQGTPLAPNGQVKASF
LDH

BO10645.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)08717-PC 497 CG15095-PC 1..497 1..497 2608 100 Plus
l(2)08717-PA 497 CG15095-PA 1..497 1..497 2608 100 Plus
l(2)08717-PB 497 CG15095-PB 1..497 1..497 2608 100 Plus
MFS15-PA 497 CG15094-PA 24..469 20..476 1201 51.2 Plus
CG15096-PB 475 CG15096-PB 2..459 5..477 1159 49.4 Plus