Clone Sequence Records
BO10665.3prime Sequence
863 bp (823 high quality bases) assembled on 2006-04-19
> BO10665.3prime
ATGGTCTAGAAAGCTTGCTACGGTGCTGTCGCGCTTTATCATTAATGGAG
TTTGGACGGTGACCTCGTCGTCGGATACATTCTGCTCGGCGGAGTGTATG
CCATCGCTGGCGATTCCGATGCAGACTCTGCCACACTGGGCCTGGTTCAT
GTGGTGCATGGCGATGGTTCGTCCATGTGGATGTGGCTGTGGCAATGTGT
TCGTCGACGAGGCCATAGAGCTATTGGATGCCTGCGACGGCGATGGTGCG
TGTCCATGGAGCGGCTGCGCCGGATTGTGACCACCGACATTGACCCTGCC
CTGGGGAAAGGTCAGCTGGTGGAACGTGGAGGTCGGCCTCGCACCGGTGA
TGTTGCAGTTGTAGTTGTTCCACACGTTCTGCGACGACTGACGTGGCAGA
GTGCATTGCGAGATCGAATTGGAGTACACGTGTGGCGTTACGTTTATTGA
GATTTCGCCCACCGAACTCTGGGCCTGGGCATGCATTCCACTCCTCAGGG
TGCAGTATCCAATTCCATGCGAGGCACGCAGGGAAATCTCGGCTGCTGTC
AGATGCTGCTGCTCATTCACGAAAATTCCTCGATTGGGACTGCGATTGGT
ATCAATTGTCGATATCTGCTGCCTTTTCCTGATGCTCTCGGCCTGCTCAT
CCGGTTCTATGGATTCGGGTACCACATCCGGATTCTTTTCATCGCAATCG
TCCACTTCCTTGCTGCCGGAACTCTTGTCGCTTGGTCCAGGCGACTCATC
TCTGGATATATTTTCATTCGATAGTTCCTTTTGACGCCGTCTCGATGAAG
CGGTACAGGGTATTCGAAGTGCCAGAATGATGGNCAAAACTGCGACCAGC
ACAGCGAGGGTTT
BO10665.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12950-PA | 2820 | CG12950-RA | 1974..2817 | 862..19 | 4201 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:01:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12950-RB | 4429 | CG12950-RB | 2633..3476 | 862..19 | 4209 | 99.9 | Minus |
| CG12950-RA | 3598 | CG12950-RA | 2633..3476 | 862..19 | 4209 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9734965..9735390 | 19..444 | 2130 | 100 | Plus |
| 3R | 32079331 | 3R | 9735751..9735971 | 642..862 | 1094 | 99.5 | Plus |
| 3R | 32079331 | 3R | 9735495..9735695 | 445..645 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:01:35 has no hits.
BO10665.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:45:39 Download gff for
BO10665.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-PA | 1973..2820 | 16..863 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:01:23 Download gff for
BO10665.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-PA | 1973..2820 | 16..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:40:45 Download gff for
BO10665.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 2632..3481 | 12..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:45:13 Download gff for
BO10665.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 2632..3481 | 12..863 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:45:13 Download gff for
BO10665.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9734960..9735390 | 12..444 | 99 | <- | Plus |
| 3R | 9735495..9735692 | 445..642 | 100 | <- | Plus |
| 3R | 9735752..9735971 | 643..863 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:40:45 Download gff for
BO10665.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5560682..5561112 | 12..444 | 99 | <- | Plus |
| arm_3R | 5561217..5561414 | 445..642 | 100 | <- | Plus |
| arm_3R | 5561474..5561693 | 643..863 | 99 | | Plus |
BO10665.5prime Sequence
878 bp (795 high quality bases) assembled on 2006-04-19
> BO10665.5prime
GAAGTTATCAGTCGACATGGAGTTACTGCTGCTGTTTATGCTAGCACTTC
AACTTATAGAATCCAGCATCGGAAGTAAAGATGTACCAATTCACCAAATT
GAATCTATAGTTGGTGAAAATATTTATCTTCCTTGCAATGTAACAACTTA
TGATGGTGATGAACCTGTGCTGGTTCTGTGGTACCGAGATGATAAGGGTA
CTCCAATTTACAGCATTGACATTCGAGCTGGAGTATCCAAAGCACCGAAA
AGATGGTCGGACGACTCCGTATTTGGGGATAGAGCATATTTTATCTTTGA
CAAGGAACCGGGAAAACTGTCAATTCAGAATACGCAAGCATCCGACTCCG
GAACTTATAGATGTCGCGTGGACTTCCTGAAAGCGCAGACCATAAACAGC
CGCATTAGGCTCAATGTCATATCTCCACCCAAACAAGTTATTATTCGAGA
CAGCTCCAATGTTGAGCGTTCTACAGTTGTGGGACCATATAGCGAAGGCG
ACATCGTATCCCTGAAATGCCAAGTAATTGGAGGCTATCCCACGCCCACA
ATCAGTTGGTATCGCGATGGCATAGAAATTCCATGCGAATTGTCTCATTT
GGCAGGCGGCAAAATTATAGAATGCGAAATCACGCTACCGTCTCTGGGTC
GGGAGGATCTTAACTCCCGGCTGACCTGTCGTGCACTGAGTCACCCCCGG
GCACCCATCGTCGAAGCGGTGGTTCAAATCGATATGAATTTTGCCCCTTT
AAACATCCGACTGTTGGGGGCACATCAACCATTGTCTGCTGGACGCAGAT
ACGATCTATTGTGCCAAAGTGCTGGCTCCAGGCCGCCGGCCGTAATTACT
TGGTGGCAAATGGCATACGGCTGGAGAA
BO10665.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12950-PA | 2820 | CG12950-RA | 1..844 | 17..860 | 4220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12950-RB | 4429 | CG12950-RB | 658..1522 | 15..878 | 4300 | 99.9 | Plus |
| CG12950-RA | 3598 | CG12950-RA | 658..1522 | 15..878 | 4300 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9738520..9738730 | 422..212 | 1055 | 100 | Minus |
| 3R | 32079331 | 3R | 9737994..9738202 | 740..532 | 1045 | 100 | Minus |
| 3R | 32079331 | 3R | 9738821..9738951 | 213..83 | 655 | 100 | Minus |
| 3R | 32079331 | 3R | 9737765..9737903 | 878..741 | 645 | 99.3 | Minus |
| 3R | 32079331 | 3R | 9738278..9738389 | 534..423 | 560 | 100 | Minus |
| 3R | 32079331 | 3R | 9739254..9739322 | 83..15 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 14:47:20 has no hits.
BO10665.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:45:40 Download gff for
BO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-PA | 1..861 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:01:25 Download gff for
BO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-PA | 1..861 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:59:05 Download gff for
BO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 652..1522 | 6..878 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:07:28 Download gff for
BO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 652..1522 | 6..878 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:07:28 Download gff for
BO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9737765..9737903 | 741..878 | 99 | <- | Minus |
| 3R | 9737994..9738200 | 534..740 | 100 | <- | Minus |
| 3R | 9738279..9738389 | 423..533 | 100 | <- | Minus |
| 3R | 9738520..9738728 | 214..422 | 100 | <- | Minus |
| 3R | 9738821..9738950 | 84..213 | 100 | <- | Minus |
| 3R | 9739254..9739328 | 6..83 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:59:05 Download gff for
BO10665.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5563487..5563625 | 741..878 | 99 | <- | Minus |
| arm_3R | 5563716..5563922 | 534..740 | 100 | <- | Minus |
| arm_3R | 5564001..5564111 | 423..533 | 100 | <- | Minus |
| arm_3R | 5564242..5564450 | 214..422 | 100 | <- | Minus |
| arm_3R | 5564543..5564672 | 84..213 | 100 | <- | Minus |
| arm_3R | 5564976..5565050 | 6..83 | 94 | | Minus |
BO10665.complete Sequence
2851 bp assembled on 2008-01-16
GenBank Submission: FJ631835
> BO10665.complete
GAAGTTATCAGTCGACATGGAGTTACTGCTGCTGTTTATGCTAGCACTTC
AACTTATAGAATCCAGCATCGGAAGTAAAGATGTACCAATTCACCAAATT
GAATCTATAGTTGGTGAAAATATTTATCTTCCTTGCAATGTAACAACTTA
TGATGGTGATGAACCTGTGCTGGTTCTGTGGTACCGAGATGATAAGGGTA
CTCCAATTTACAGCATTGACATTCGAGCTGGAGTATCCAAAGCACCGAAA
AGATGGTCGGACGACTCCGTATTTGGGGATAGAGCATATTTTATCTTTGA
CAAGGAACCGGGAAAACTGTCAATTCAGAATACGCAAGCATCCGACTCCG
GAACTTATAGATGTCGCGTGGACTTCCTGAAAGCGCAGACCATAAACAGC
CGCATTAGGCTCAATGTCATATCTCCACCCAAACAAGTTATTATTCGAGA
CAGCTCCAATGTTGAGCGTTCTACAGTTGTGGGACCATATAGCGAAGGCG
ACATCGTATCCCTGAAATGCCAAGTAATTGGAGGCTATCCCACGCCCACA
ATCAGTTGGTATCGCGATGGCATAGAAATTCCATGCGAATTGTCTCATTT
GGCAGGCGGCAAAATTATAGAATGCGAAATCACGCTACCGTCTCTGGGTC
GGGAGGATCTTAACTCCCGGCTGACCTGTCGTGCACTGAGTCACCCCCGG
GCACCCATCGTCGAAGCGGTGGTTCAAATCGATATGAATTTTGCCCCTTT
AAACATCCGACTGTTGGGGGCACATCAACCATTGTCTGCTGGACGCAGAT
ACGATCTATTGTGCCAAAGTGCTGGCTCCAGGCCGCCGGCCGTAATTACT
TGGTGGCAAAATGGCATACGGCTGGAGAAGACAACCGAAACGACTTCAAG
CGATGGCAACCAGACCACAAGCACTCTCTCAATCAGCCTAAGCAAATCAG
ATGCGGGAAAGTATTTATCATGCAAAGCCTACAACCATGCCGTTCCCTCC
GAGCCCCTGGAAGATGGCTGGAAATTAGATATACAATATGTCCCGGAAGC
GTACGTTCGTTTGGGAACATCTCTGGATCCGAGCACTTTACGAGAAGGAA
CAGATGTCTACTTTGATTGCCTGGTGATGGCCCATCCAAATGTCTTTCGC
ATCGAATGGCGTCACAACGAACAACCTTTATCACACAATATATCACTGGG
CGTCATAATTAGTAATCACTCGTTGGTACTGCAAGGTGTAACTAGAGCCA
CTGCGGGAAACTATTCCTGTGTGGGTTTCAATGCCGAAGGAGAAGGAATC
AGTGCTCCCTTTGCACTAAACATACTCTACGCCCCCACGTGTGCCCAGAA
TCAGAAGAAGGTGTACGGCATAGCCAAGCAGGAGGACGCGAAGGTCATGT
GCACCGTGGACGCTAATCCGCGCGAGGTCGAGTTTAGCTGGACATTTAAT
AATTCTGCCGAGAGTATTGATGTCGCCACAAATCATATTATACGCTCGGG
TACCACCTCCATTGTAACATACACACCCATTACGGAACTGGACTACGGAA
CCCTTTTGTGTTTGGCGTCGAACAAAATTGGCAAACAGCGAGTGCCATGT
GTCTTCCATATAATCGCCGCAGGACGACCGGAAAAAGTTCATAATTGCAC
GGTGAACAATATATCTATGACATCCTTGACGGTCACTTGTAGTGATGGTT
TCAACGGCGGCTTGCCACAGAGTTTTAATTTAGAACTGCTGGACTCTTAC
ACACAAGAAATTAAAGCTAATATAACATCCACTATTCCCAAGTTTACGGT
GCCAGGTTTGAGTCCGGGAAGTATATATAGGCTGAATATTTACGCGTTCA
ATACGAAGGGTCGATCCGATCCAGCTATAGTCAATGCGGCCATGCTGCGA
ATGCCCGAGAAGCAACTGACCTCGGAACAGACCCACAATCTTCGCGCTGA
GCTGCTATTTTCACCAGTGATGTCCTTAACAATTGGCCTAACCCTCGCTG
TGCTGGTCGCAGTTTTGGCCATCATTCTGGCACTTCGAATACCCTGTACC
GCTTCATCGAGACGGCGTCAAAAGGAACTATCGAATGAAAATATATCCAG
AGATGAGTCGCCTGGACCAAGCGACAAGAGTTCCGGCAGCAAGGAAGTGG
ACGATTGCGATGAAAAGAATCCGGATGTGGTACCCGAATCCATAGAACCG
GATGAGCAGGCCGAGAGCATCAGGAAAAGGCAGCAGATATCGACAATTGA
TACCAATCGCAGTCCCAATCGAGGAATTTTCGTGAATGAGCAGCAGCATC
TGACAGCAGCCGAGATTTCCCTGCGTGCCTCGCATGGAATTGGATACTGC
ACCCTGAGGAGTGGAATGCATGCCCAGGCCCAGAGTTCGGTGGGCGAAAT
CTCAATAAACGTAACGCCACACGTGTACTCCAATTCGATCTCGCAATGCA
CTCTGCCACGTCAGTCGTCGCAGAACGTGTGGAACAACTACAACTGCAAC
ATCACCGGTGCGAGGCCGACCTCCACGTTCCACCAGCTGACCTTTCCCCA
GGGCAGGGTCAATGTCGGTGGTCACAATCCGGCGCAGCCGCTCCATGGAC
ACGCACCATCGCCGTCGCAGGCATCCAATAGCTCTATGGCCTCGTCGACG
AACACATTGCCACAGCCACATCCACATGGACGAACCATCGCCATGCACCA
CATGAACCAGGCCCAGTGTGGCAGAGTCTGCATCGGAATCGCCAGCGATG
GCATACACTCCGCCGAGCAGAATGTATCCGACGACGAGGTCACCGTCCAA
ACTCCATTAATGATAAAGCGCGACAGCACCGTAGCAAGCTTTCTAGACCA
T
BO10665.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:35:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12950-RB | 2820 | CG12950-PB | 1..2817 | 17..2833 | 14085 | 100 | Plus |
| CG12950-RA | 2820 | CG12950-PA | 1..2817 | 17..2833 | 14085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:35:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12950-RB | 4429 | CG12950-RB | 658..3476 | 15..2833 | 14095 | 100 | Plus |
| CG12950-RA | 3598 | CG12950-RA | 658..3476 | 15..2833 | 14095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9734965..9735390 | 2833..2408 | 2130 | 100 | Minus |
| 3R | 32079331 | 3R | 9735751..9736029 | 2210..1932 | 1395 | 100 | Minus |
| 3R | 32079331 | 3R | 9738520..9738730 | 422..212 | 1055 | 100 | Minus |
| 3R | 32079331 | 3R | 9737994..9738202 | 740..532 | 1045 | 100 | Minus |
| 3R | 32079331 | 3R | 9735495..9735695 | 2407..2207 | 1005 | 100 | Minus |
| 3R | 32079331 | 3R | 9736097..9736271 | 1931..1757 | 875 | 100 | Minus |
| 3R | 32079331 | 3R | 9736717..9736890 | 1502..1329 | 870 | 100 | Minus |
| 3R | 32079331 | 3R | 9737119..9737278 | 1328..1169 | 800 | 100 | Minus |
| 3R | 32079331 | 3R | 9737752..9737903 | 892..741 | 760 | 100 | Minus |
| 3R | 32079331 | 3R | 9737540..9737685 | 1037..892 | 730 | 100 | Minus |
| 3R | 32079331 | 3R | 9736338..9736474 | 1757..1621 | 685 | 100 | Minus |
| 3R | 32079331 | 3R | 9737344..9737475 | 1169..1038 | 660 | 100 | Minus |
| 3R | 32079331 | 3R | 9738821..9738951 | 213..83 | 655 | 100 | Minus |
| 3R | 32079331 | 3R | 9736532..9736656 | 1623..1499 | 625 | 100 | Minus |
| 3R | 32079331 | 3R | 9738278..9738389 | 534..423 | 560 | 100 | Minus |
| 3R | 32079331 | 3R | 9739254..9739322 | 83..15 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:35:30 has no hits.
BO10665.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:23 Download gff for
BO10665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 1..2820 | 17..2836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:36:24 Download gff for
BO10665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 610..3426 | 17..2835 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:53:30 Download gff for
BO10665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 660..3476 | 17..2835 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:24 Download gff for
BO10665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 602..3431 | 6..2840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:04 Download gff for
BO10665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12950-RA | 660..3476 | 17..2835 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:04 Download gff for
BO10665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9735752..9736029 | 1932..2209 | 100 | <- | Minus |
| 3R | 9736097..9736271 | 1757..1931 | 100 | <- | Minus |
| 3R | 9736339..9736472 | 1623..1756 | 100 | <- | Minus |
| 3R | 9736533..9736655 | 1500..1622 | 100 | <- | Minus |
| 3R | 9736720..9736890 | 1329..1499 | 100 | <- | Minus |
| 3R | 9737119..9737278 | 1169..1328 | 100 | <- | Minus |
| 3R | 9737345..9737475 | 1038..1168 | 100 | <- | Minus |
| 3R | 9737540..9737684 | 893..1037 | 100 | <- | Minus |
| 3R | 9737752..9737903 | 741..892 | 100 | <- | Minus |
| 3R | 9737994..9738200 | 534..740 | 100 | <- | Minus |
| 3R | 9738279..9738389 | 423..533 | 100 | <- | Minus |
| 3R | 9738520..9738728 | 214..422 | 100 | <- | Minus |
| 3R | 9738821..9738950 | 84..213 | 100 | <- | Minus |
| 3R | 9739254..9739320 | 17..83 | 100 | | Minus |
| 3R | 9735495..9735692 | 2210..2407 | 100 | <- | Minus |
| 3R | 9734961..9735390 | 2408..2835 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:53:30 Download gff for
BO10665.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5561217..5561414 | 2210..2407 | 100 | <- | Minus |
| arm_3R | 5560683..5561112 | 2408..2835 | 99 | <- | Minus |
| arm_3R | 5561474..5561751 | 1932..2209 | 100 | <- | Minus |
| arm_3R | 5561819..5561993 | 1757..1931 | 100 | <- | Minus |
| arm_3R | 5562061..5562194 | 1623..1756 | 100 | <- | Minus |
| arm_3R | 5562255..5562377 | 1500..1622 | 100 | <- | Minus |
| arm_3R | 5562442..5562612 | 1329..1499 | 100 | <- | Minus |
| arm_3R | 5562841..5563000 | 1169..1328 | 100 | <- | Minus |
| arm_3R | 5563067..5563197 | 1038..1168 | 100 | <- | Minus |
| arm_3R | 5563262..5563406 | 893..1037 | 100 | <- | Minus |
| arm_3R | 5563474..5563625 | 741..892 | 100 | <- | Minus |
| arm_3R | 5563716..5563922 | 534..740 | 100 | <- | Minus |
| arm_3R | 5564001..5564111 | 423..533 | 100 | <- | Minus |
| arm_3R | 5564242..5564450 | 214..422 | 100 | <- | Minus |
| arm_3R | 5564543..5564672 | 84..213 | 100 | <- | Minus |
| arm_3R | 5564976..5565042 | 17..83 | 100 | | Minus |
BO10665.pep Sequence
Translation from 16 to 2851
> BO10665.pep
MELLLLFMLALQLIESSIGSKDVPIHQIESIVGENIYLPCNVTTYDGDEP
VLVLWYRDDKGTPIYSIDIRAGVSKAPKRWSDDSVFGDRAYFIFDKEPGK
LSIQNTQASDSGTYRCRVDFLKAQTINSRIRLNVISPPKQVIIRDSSNVE
RSTVVGPYSEGDIVSLKCQVIGGYPTPTISWYRDGIEIPCELSHLAGGKI
IECEITLPSLGREDLNSRLTCRALSHPRAPIVEAVVQIDMNFAPLNIRLL
GAHQPLSAGRRYDLLCQSAGSRPPAVITWWQNGIRLEKTTETTSSDGNQT
TSTLSISLSKSDAGKYLSCKAYNHAVPSEPLEDGWKLDIQYVPEAYVRLG
TSLDPSTLREGTDVYFDCLVMAHPNVFRIEWRHNEQPLSHNISLGVIISN
HSLVLQGVTRATAGNYSCVGFNAEGEGISAPFALNILYAPTCAQNQKKVY
GIAKQEDAKVMCTVDANPREVEFSWTFNNSAESIDVATNHIIRSGTTSIV
TYTPITELDYGTLLCLASNKIGKQRVPCVFHIIAAGRPEKVHNCTVNNIS
MTSLTVTCSDGFNGGLPQSFNLELLDSYTQEIKANITSTIPKFTVPGLSP
GSIYRLNIYAFNTKGRSDPAIVNAAMLRMPEKQLTSEQTHNLRAELLFSP
VMSLTIGLTLAVLVAVLAIILALRIPCTASSRRRQKELSNENISRDESPG
PSDKSSGSKEVDDCDEKNPDVVPESIEPDEQAESIRKRQQISTIDTNRSP
NRGIFVNEQQHLTAAEISLRASHGIGYCTLRSGMHAQAQSSVGEISINVT
PHVYSNSISQCTLPRQSSQNVWNNYNCNITGARPTSTFHQLTFPQGRVNV
GGHNPAQPLHGHAPSPSQASNSSMASSTNTLPQPHPHGRTIAMHHMNQAQ
CGRVCIGIASDGIHSAEQNVSDDEVTVQTPLMIKRDSTVASFLDH
BO10665.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12950-PB | 939 | CG12950-PB | 1..939 | 1..939 | 4895 | 100 | Plus |
| CG12950-PA | 939 | CG12950-PA | 1..939 | 1..939 | 4895 | 100 | Plus |
| CG14372-PC | 1001 | CG14372-PC | 74..737 | 21..688 | 1308 | 40.1 | Plus |
| CG14372-PD | 1001 | CG14372-PD | 74..737 | 21..688 | 1308 | 40.1 | Plus |
| CG34114-PC | 760 | CG34114-PC | 38..736 | 31..723 | 1290 | 38.5 | Plus |
