Clone BO10673 Report

Search the DGRC for BO10673

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:106
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG32264-RB
Protein status:BO10673.pep:
Sequenced Size:2404

Clone Sequence Records

BO10673.3prime Sequence

879 bp (861 high quality bases) assembled on 2006-04-19

> BO10673.3prime
ATGGTCTAGAAAGCTTGCTGGCCTATGGAATCTCGTCAAATGCCGACTGC
CCTCGTGGACGGCCATTTCGGAGGACTTGAACTCGTTCAGCTCCTTGCGA
ATGGCGGCCTTGTCCTTTGGCGTCAGTCTTGTCCACGGCTTGTCCGCCCG
CCGATCGTAGTCGTGGGCCTGCGTGACCTCGATGTAGTCGTTGAATCGGA
TGATCTTCTTCTCCTTCAGCTCCTCGACGGTCGGCCGAAAGCTGAGTTTG
CGCAACAGATACGACTTCTTCTCCTCCTTCTGCTTCTTCTCCTCGGCGGG
TGATTGAGTTTTCAAGATGTTGCGCTCGACCAGCTCCTCGGCCGTGGGTC
GCATGGACAGCCGCCGGATGAGGCGTGCTCCGATCGCCTCCTTGGACTCC
TTGAGCTCGTTGTCGTTGACCTGGTGCAGGATGTTGCGGTTGATCAGGTC
CTGCTTGTCCGGTCGGAGCTGCAGCTTCAGGGACAGCGACTCCTTGCGGG
CCAGTTTGGCCAGCCGGGTGTTGTCGTTGTCCTCGTCCCTGTAGACGATA
TGGCCATCGCTGTCGTCACTATCGCTGCTGCTTTCGCGTATCACAAATGG
CCGGGCGTTCTCCTTGTTCTCCACGGTGCACGGCAATTGGATGTTGAACA
TTTGCTGCCTGTTGAGCGAATAGTTATTGCCCGCCGCATCCTGGCGAACG
ACCAGCGGTCGTTGGTTGGCGGATTGTTGGGCCGCAGCTGCGGCAGCTGC
CGCCATCGAGCCAATACCGCCATTGCTGTTTGCCATGGCCGCTGCCGTTG
CCGCACTTCCCGCTCCATGTTCCTGGGTGGGCGTGACCGGCGTGGAGGCG
GAAGCGGGCTGCATCCCGCCCTTCTTCTT

BO10673.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PB 2373 CG32264-RB 1510..2370 879..19 4280 99.8 Minus
CG32264-PD 3027 CG32264-RD 2382..3024 661..19 3215 100 Minus
CG32264-PC 2310 CG32264-RC 1665..2307 661..19 3215 100 Minus
CG32264-PA 2814 CG32264-RA 2169..2811 661..19 3215 100 Minus
CG32264-PD 3027 CG32264-RD 2134..2351 879..662 1065 99.5 Minus
CG32264-PC 2310 CG32264-RC 1417..1634 879..662 1065 99.5 Minus
CG32264-PA 2814 CG32264-RA 1921..2138 879..662 1065 99.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RM 3767 CG32264-RM 2729..3589 879..19 4290 99.9 Minus
CG32264-RL 2798 CG32264-RL 1760..2620 879..19 4290 99.9 Minus
CG32264-RK 5535 CG32264-RK 2106..2966 879..19 4290 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3718638..3718990 309..661 1765 100 Plus
3L 28110227 3L 3718196..3718472 32..308 1385 100 Plus
3L 28110227 3L 3722156..3722373 662..879 1075 99.5 Plus
Blast to na_te.dros performed 2015-02-12 00:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 877..942 546..611 123 65.2 Plus

BO10673.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:45:54 Download gff for BO10673.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-PB 1510..2373 16..879 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:01:44 Download gff for BO10673.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-PB 1510..2373 16..879 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:52:39 Download gff for BO10673.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-RK 2106..2974 11..879 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:05:38 Download gff for BO10673.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-RK 2106..2974 11..879 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:05:38 Download gff for BO10673.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 3718196..3718472 32..308 100 <- Plus
3L 3718638..3718990 309..661 100 <- Plus
3L 3722156..3722373 662..879 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:52:39 Download gff for BO10673.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3722156..3722373 662..879 99   Plus
arm_3L 3718196..3718472 32..308 100 <- Plus
arm_3L 3718638..3718990 309..661 100 <- Plus

BO10673.5prime Sequence

915 bp (825 high quality bases) assembled on 2006-04-19

> BO10673.5prime
GAAGTTATCAGTCGACATGCTGCAGTACCAGCAACCGCAACAGCAACAAC
AACAGCAACAGTTACTGCAACAGGAGCAGCAACAGCAACTGCAACAGCAA
CAGCAGCAGCATCAGCATTTACTGCAGCAACAGCTGCCACAGCAGCGACG
TCAAACGTACAAGGAATACTTGCAACAGCATCAGCAGCAAAAGCAACAGC
AACAGCTGCAGCAACAGCAACAGAACAACCAGCCCCTGCGGATATTCCGC
GTCCACTACATCCGCCTGAATTCTAAGGACGGCGTACCGTCCCTCAACCA
GCAGGTCAATGGTTACCCCAATGGATCCCCAAATGGCTCCAAAATGAAGA
CCATAGCACCGAATATCCGCCGACGGCGTCGATGCGATAAGCACCATTTG
GAGCTCTACTGCAATGAGACCACCACGCCGCCCACAAATGTGCCCACTAA
TACCAGTGGCGGCAGCGGCAGCAGCAGTAATCAGTTGAAGCCCGGCGGCC
TGAGGATTCGGGAATGCATTACTGCACCGAGTACGGCGGCCAGTTCGCCG
GTGGACGAGCACATGTGCATCCCGGCACCGCCCATCACACCGCCGCCGGC
CTTCCTCACCGAGGGCTACAAACGGTCGAGCACTTCGGTCTCCACATCGG
CTTTGCCCAGTGCCACCAGCAGCCAGGAGACCCAGACGCAGAGCCAGACC
CAGAGCAGTACACAAACCCGGACCCACAACCAGAATCACATGCAGTGTAT
GAAACCGAACCTGATACGCCAGCAGAAGCCATTTCCCGTAGTTGCCAAGC
CACTGGGTCCGCAGAAGCCCAGGACGACGGNCACCATTGCGGTCACGTTG
AACAGCGGCTCCAACAGCCACGTGCCACGGTCAAGAGGAGTTTAGAACAA
GAAAAGACAGACTGA

BO10673.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PB 2373 CG32264-RB 1..850 17..866 4231 99.8 Plus
CG32264-PB 2373 CG32264-RB 851..883 866..898 165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RB 4202 CG32264-RB 1655..2556 17..915 4424 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3741996..3742875 895..17 4339 99.8 Minus
Blast to na_te.dros performed on 2015-02-10 21:26:20 has no hits.

BO10673.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:45:55 Download gff for BO10673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-PB 1..901 17..914 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:01:45 Download gff for BO10673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-PB 1..901 17..914 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:50:10 Download gff for BO10673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 1647..2555 8..914 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:45:59 Download gff for BO10673.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 1647..2555 8..914 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:45:59 Download gff for BO10673.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3741996..3742883 8..895 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:50:10 Download gff for BO10673.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3741996..3742883 8..895 99   Minus

BO10673.complete Sequence

2404 bp assembled on 2008-01-16

GenBank Submission: FJ631838

> BO10673.complete
GAAGTTATCAGTCGACATGCTGCAGTACCAGCAACCGCAACAGCAACAAC
AACAGCAACAGTTACTGCAACAGGAGCAGCAACAGCAACTGCAACAGCAA
CAGCAGCAGCATCAGCATTTACTGCAGCAACAGCTGCCACAGCAGCGACG
TCAAACGTACAAGGAATACTTGCAACAGCATCAGCAGCAAAAGCAACAGC
AACAGCTGCAGCAACAGCAACAGAACAACCAGCCCCTGCGGATATTCCGC
GTCCACTACATCCGCCTGAATTCTAAGGACGGCGTACCGTCCCTCAACCA
GCAGGTCAATGGTTACCCCAATGGATCCCCAAATGGCTCCAAAATGAAGA
CCATAGCACCGAATATCCGCCGACGGCGTCGATGCGATAAGCACCATTTG
GAGCTCTACTGCAATGAGACCACCACGCCGCCCACAAATGTGCCCACTAA
TACCAGTGGCGGCAGCGGCAGCAGCAGTAATCAGTTGAAGCCCGGCGGCC
TGAGGATTCGGGAATGCATTACTGCACCGAGTACGGCGGCCAGTTCGCCG
GTGGACGAGCACATGTGCATCCCGGCACCGCCCATCACACCGCCGCCGGC
CTTCCTCACCGAGGGCTACAAACGGTCGAGCACTTCGGTCTCCACATCGG
CTTTGCCCAGTGCCACCAGCAGCCAGGAGACCCAGACGCAGAGCCAGACC
CAGAGCAGTACACAAACCCGGACCCACAACCAGAATCACATGCAGTGTAT
GAAACCGAACCTGATACGCCAGCAGAAGCCATTTCCCGTAGTTGCCAAGC
CACTGGGTCCGCAGAAGCCCAGGACGACGGCCACCATTGCGGTCACGTTG
AACAGCGGCTCCAACAAGCCACGTGCCACGGTCAAGAGGAGTTTAGAACC
AAGAAAAGACAAGACTGATGCACAACAACAACAACACGGAGGCAATGGCA
CAATATCCACGCCCAACATCGAGCAGCCCACCTGCCAGGGCTCGATGCTG
CCGCCCCCCGGAGGCGGTGGCCATCACCAGGTGGACGGGAGTGGCAAGAT
GGAGCGGCCCAACACGCTCGCCGGCGCCAATAAGCTGACCCGTCGCGGGG
TCAACATCTGCTATCACAACGAGCACATGTATGGCGAAGATGGAAAAATG
GTGGGTGGTCCGCCGGGCAGCACTCCGCCCCCGTATCCGGGTGGCAAACT
ACCGCCGGGCGTAATGCTCAGCGAACTGCCGGAGCCGCCGATTCCGCTGT
CGGAGATCGGACCGATCCCACCGCCCCCGATGTTCTCCACTCCGAGTCCC
ACGCTCATCGCAGGACGACCGCACGGGCCAGGGGCCGTCAACGATCAGGA
TTATCAGCAGGACTACGACTACGATGATAACGATCCCGATCAGGATGAGC
TTGACTCGGACGATGAGTACGCCCCGTATGGTGGCAACCATGTGCGCATG
ATGGACACGCAACGCGTCGAGGAAATTCCAGCCAAAGAGCCCAAACCAAA
TGCAGTTCCTCTCAAGTCGGCGCTGAAGAAGAAGGGCGGTATGCAGCCCG
CTTCCGCCTCCACGCCGGTCACGCCCACCCAGGAACATGGAGCGGGAAGT
GCGGCAACGGCAGCGGCCATGGCAAACAGCAATGGCGGTATTGGCTCGAT
GGCGGCAGCTGCCGCAGCTGCGGCCCAACAATCCGCCAACCAACGACCGC
TGGTCGTTCGCCAGGATGCGGCGGGCAATAACTATTCGCTCAACAGGCAG
CAAATGTTCAACATCCAATTGCCGTGCACCGTGGAGAACAAGGAGAACGC
CCGGCCATTTGTGATACGCGAAAGCAGCAGCGATAGTGACGACAGCGATG
GCCATATCGTCTACAGGGACGAGGACAACGACAACACCCGGCTGGCCAAA
CTGGCCCGCAAGGAGTCGCTGTCCCTGAAGCTGCAGCTCCGACCGGACAA
GCAGGACCTGATCAACCGCAACATCCTGCACCAGGTCAACGACAACGAGC
TCAAGGAGTCCAAGGAGGCGATCGGAGCACGCCTCATCCGGCGGCTGTCC
ATGCGACCCACGGCCGAGGAGCTGGTCGAGCGCAACATCTTGAAAACTCA
ATCACCCGCCGAGGAGAAGAAGCAGAAGGAGGAGAAGAAGTCGTATCTGT
TGCGCAAACTCAGCTTTCGGCCGACCGTCGAGGAGCTGAAGGAGAAGAAG
ATCATCCGATTCAACGACTACATCGAGGTCACGCAGGCCCACGACTACGA
TCGGCGGGCGGACAAGCCGTGGACAAGACTGACGCCAAAGGACAAGGCCG
CCATTCGCAAGGAGCTGAACGAGTTCAAGTCCTCCGAAATGGCCGTCCAC
GAGGGCAGTCGGCATTTGACGAGATTCCATAGGCCAGCAAGCTTTCTAGA
CCAT

BO10673.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RB 2373 CG32264-PB 1..2370 17..2386 11850 100 Plus
CG32264-RJ 1530 CG32264-PJ 36..1527 895..2386 7460 100 Plus
CG32264-RM 2784 CG32264-PM 1291..2781 896..2386 7455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RB 4202 CG32264-RB 1655..4024 17..2386 11850 100 Plus
CG32264-RJ 2609 CG32264-RJ 940..2431 895..2386 7460 100 Plus
CG32264-RG 2418 CG32264-RG 749..2240 895..2386 7460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3741996..3742875 896..17 4400 100 Minus
3L 28110227 3L 3722156..3722523 1743..1376 1840 100 Minus
3L 28110227 3L 3718638..3718990 2096..1744 1765 100 Minus
3L 28110227 3L 3718196..3718472 2373..2097 1385 100 Minus
3L 28110227 3L 3722856..3723105 1380..1131 1235 99.6 Minus
3L 28110227 3L 3723639..3723874 1130..895 1180 100 Minus
Blast to na_te.dros performed 2014-11-27 15:15:01
Subject Length Description Subject Range Query Range Score Percent Strand
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 877..942 1859..1794 123 65.2 Minus

BO10673.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:26 Download gff for BO10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 1..2373 17..2389 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:34:07 Download gff for BO10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 1742..4111 17..2388 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:16 Download gff for BO10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 1655..4024 17..2388 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:26 Download gff for BO10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 1734..4119 8..2394 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:03:17 Download gff for BO10673.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 1655..4024 17..2388 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:03:17 Download gff for BO10673.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3718196..3718472 2097..2373 100 <- Minus
3L 3718638..3718990 1744..2096 100 <- Minus
3L 3722156..3722522 1377..1743 100 <- Minus
3L 3722860..3723105 1131..1376 100 <- Minus
3L 3723639..3723872 897..1130 100 <- Minus
3L 3741996..3742875 17..896 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:16 Download gff for BO10673.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3718196..3718472 2097..2373 100 <- Minus
arm_3L 3718638..3718990 1744..2096 100 <- Minus
arm_3L 3722156..3722522 1377..1743 100 <- Minus
arm_3L 3722860..3723105 1131..1376 100 <- Minus
arm_3L 3723639..3723872 897..1130 100 <- Minus
arm_3L 3741996..3742875 17..896 100   Minus

BO10673.pep Sequence

Translation from 16 to 2404

> BO10673.pep
MLQYQQPQQQQQQQQLLQQEQQQQLQQQQQQHQHLLQQQLPQQRRQTYKE
YLQQHQQQKQQQQLQQQQQNNQPLRIFRVHYIRLNSKDGVPSLNQQVNGY
PNGSPNGSKMKTIAPNIRRRRRCDKHHLELYCNETTTPPTNVPTNTSGGS
GSSSNQLKPGGLRIRECITAPSTAASSPVDEHMCIPAPPITPPPAFLTEG
YKRSSTSVSTSALPSATSSQETQTQSQTQSSTQTRTHNQNHMQCMKPNLI
RQQKPFPVVAKPLGPQKPRTTATIAVTLNSGSNKPRATVKRSLEPRKDKT
DAQQQQHGGNGTISTPNIEQPTCQGSMLPPPGGGGHHQVDGSGKMERPNT
LAGANKLTRRGVNICYHNEHMYGEDGKMVGGPPGSTPPPYPGGKLPPGVM
LSELPEPPIPLSEIGPIPPPPMFSTPSPTLIAGRPHGPGAVNDQDYQQDY
DYDDNDPDQDELDSDDEYAPYGGNHVRMMDTQRVEEIPAKEPKPNAVPLK
SALKKKGGMQPASASTPVTPTQEHGAGSAATAAAMANSNGGIGSMAAAAA
AAAQQSANQRPLVVRQDAAGNNYSLNRQQMFNIQLPCTVENKENARPFVI
RESSSDSDDSDGHIVYRDEDNDNTRLAKLARKESLSLKLQLRPDKQDLIN
RNILHQVNDNELKESKEAIGARLIRRLSMRPTAEELVERNILKTQSPAEE
KKQKEEKKSYLLRKLSFRPTVEELKEKKIIRFNDYIEVTQAHDYDRRADK
PWTRLTPKDKAAIRKELNEFKSSEMAVHEGSRHLTRFHRPASFLDH

BO10673.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:41:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PB 790 CG32264-PB 1..790 1..790 4158 100 Plus
CG32264-PM 927 CG32264-PM 423..927 286..790 2627 98.6 Plus
CG32264-PL 759 CG32264-PL 255..759 286..790 2627 98.6 Plus
CG32264-PK 822 CG32264-PK 318..822 286..790 2627 98.6 Plus
CG32264-PE 998 CG32264-PE 494..998 286..790 2627 98.6 Plus