Clone BO10686 Report

Search the DGRC for BO10686

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:106
Well:86
Vector:pDNR-Dual
Associated Gene/Transcripthig-RC
Protein status:BO10686.pep: Imported from assembly
Sequenced Size:2632

Clone Sequence Records

BO10686.3prime Sequence

927 bp (835 high quality bases) assembled on 2006-04-19

> BO10686.3prime
ATGGTCTAGAAAGCTTGCCTTACAAAATGGCGGCGAGTGCGACCACTGTC
CGTTCTCCGTGCAGATGATGCTCGACTCGCCCACCAGGCTGTGCCCGTCG
TTGCAGCTAAACGTGACCAGGGCGCCCACGGTGAGGCGCCTCTGGCTCAG
GCTGGTGCCCCCGATGCGCCCGTTGAGCGGCGCCACTGGCATCACGCACT
GAATGACTTTGCAACGCGGAACGGGGCCACTCCAGACGCCCGACGGCTCA
CAGTCCAGCTGCGCCGGTCCGGTCAGCTTGAAGCCCCACTGGCATTTGAA
CACCGCCCGCCCCCATGCCGAGGTGTTCAGCTCGATCAGGCTGAGGTGCG
GGTCGTCCAGCTCCAGACGTGGACACTGAATGGCATGGCAGGTCGGCGTC
GGCGATGACCAATTGCCGGAGGCCAGGCAGGTGGCGTTCCAGGCGCCGTC
GAGCCGGAAGCCCTCGGGGCACTCGTAGTGCGCCCGCTGGCCCAGCTTAT
TGCCCTCGAGGCGCAGCTTGAGCGGCGCCAGCGGCTCTGTTAGCTGCGGA
CACGTCGAAGTGGCCACCACGACGGCAATGCTGTTGGTCAGTCCGCGCGG
CGAGGTGCAGGTGAAGGTGCCGGAGTCGTTGTTCTCGATATTCTTGATGC
TCAGCCGGTAGCGCACCGCTTTCTCCTCCTGGGCTGGAGACCATCCTGTA
GAATACTGCATGTACCAGCTGGTCCAGCTCCATTCCGGAGTGCCCCTAAC
CCTCGGATACATGCAGTCCATGAGCACTGTGCTGTGCGGCGGAACGGCCA
TGACGCCGGATGGCTCAAAGGAGTGGGAGCCATTGAAGATCTTGATGCGG
ATCGATGGGGCGCTGTCCTCCGAGTAGTTGGTCAGCACCGTGGTGGGGAC
GCAGCTGGGCATCCGCGGTGCCCACAG

BO10686.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG2040-PC 2601 hig-RC 1690..2598 927..19 4545 100 Minus
CG2040-PD 2676 hig-RD 1765..2673 927..19 4545 100 Minus
CG2040-PB 2802 hig-RB 1690..2594 927..23 4525 100 Minus
CG2040-PA 2877 hig-RA 1765..2669 927..23 4525 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:00:27
Subject Length Description Subject Range Query Range Score Percent Strand
hig-RD 4332 CG2040-RD 2120..3028 927..19 4545 100 Minus
hig-RC 4257 CG2040-RC 2045..2953 927..19 4545 100 Minus
hig-RA 4026 CG2040-RA 2120..3024 927..23 4525 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9229598..9230091 207..700 2470 100 Plus
2R 25286936 2R 9230311..9230543 695..927 1165 100 Plus
2R 25286936 2R 9229089..9229278 19..208 950 100 Plus
Blast to na_te.dros performed on 2015-02-10 20:00:26 has no hits.

BO10686.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:46:21 Download gff for BO10686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2040-PC 1690..2601 18..927 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:02:20 Download gff for BO10686.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2040-PD 1765..2676 18..927 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:40:08 Download gff for BO10686.3prime
Subject Subject Range Query Range Percent Splice Strand
hig-RC 2045..2953 19..927 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:43:18 Download gff for BO10686.3prime
Subject Subject Range Query Range Percent Splice Strand
hig-RC 2045..2953 19..927 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:43:18 Download gff for BO10686.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 9229089..9229276 19..206 100 <- Plus
2R 9229598..9230086 207..695 100 <- Plus
2R 9230312..9230543 696..927 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:40:08 Download gff for BO10686.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5116594..5116781 19..206 100 <- Plus
arm_2R 5117103..5117591 207..695 100 <- Plus
arm_2R 5117817..5118048 696..927 100   Plus

BO10686.5prime Sequence

844 bp (806 high quality bases) assembled on 2006-04-19

> BO10686.5prime
GAAGTTATCAGTCGACATGTGGAGCAGGCAGCGAATGCGCCATAAGCCGC
TTTGGGCCCTAATATCCTTGACCGTTTTGCTGCTGGTCCTGGACAAAAGC
AATGCCAACACGGAGCCCGTCGAGACCAGCACCACATCCGAGCCAGATGC
CTCGCCAGGCTGTCGGGCGCCGGATGTGCGCTTCACGATTGTCAAGCCGG
AAGCGACGACGGAGCAGCCGCTGGCCAAATTCGAGACCACGCAGATCTAC
CTGCCGGAGGACTTCACCACGGCGGATGTGGAGTTCGTGGACTCGGTGCC
GCGTCACCCCAACGAAAACCATGCGGCCGTAATCAATCCGTACTCGCTGG
ACCTGGGCGACGACCACTTGCATGTGGGCGATGCGGCCGCCAGTTTGGTT
GGCGACGATGATCTGGGTGACGAGGACGAGGACCACCACGGGGACCCGGA
GGATAAGCGCTTAAATGCCAATCGCAAGCAGGGCAAACGAAGGCGCGCGG
GCTCAGGCCGTCGGCGGAGGATTGAGAATGAAAATGGACAGACAGGCAGG
GGTCGTGGCAGTCGATATAAGCGGCATGCCATTCTCCATGACACGGAAGC
CTCACCGGAAACGGATCGCTGGGCGGGCAGCAAGCTGGCAGCCGAAGGGG
ATGTGTACTATGTCCACATAGCCGATATCCTGAAGAGCCGTGAGCCAAAT
CGTGAATTGAAATCGAAGCTGCACAAGCTCAAAATGAAGGCCAGACTGAA
CAAGTGCCTGGCGGAAGGTGGCAAGGAGAAGTGCACAAGGCTCCTCAAGA
AGAAGCCCAAGAAGAAAGTCGTCGAGAAGGAGCAGACCCTGAAA

BO10686.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG2040-PB 2802 hig-RB 1..827 17..843 4110 99.8 Plus
CG2040-PA 2877 hig-RA 1..827 17..843 4110 99.8 Plus
CG2040-PC 2601 hig-RC 1..827 17..843 4110 99.8 Plus
CG2040-PD 2676 hig-RD 1..827 17..843 4110 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:47:02
Subject Length Description Subject Range Query Range Score Percent Strand
hig-RD 4332 CG2040-RD 353..1182 14..843 4135 99.9 Plus
hig-RC 4257 CG2040-RC 353..1182 14..843 4135 99.9 Plus
hig-RA 4026 CG2040-RA 353..1182 14..843 4135 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:46:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9234879..9235578 843..144 3485 99.9 Minus
2R 25286936 2R 9246765..9246897 146..14 665 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:46:59 has no hits.

BO10686.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:46:22 Download gff for BO10686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2040-PB 1..825 17..841 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:02:21 Download gff for BO10686.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2040-PD 1..825 17..841 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:02:33 Download gff for BO10686.5prime
Subject Subject Range Query Range Percent Splice Strand
hig-RA 346..1180 7..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:48:43 Download gff for BO10686.5prime
Subject Subject Range Query Range Percent Splice Strand
hig-RA 346..1180 7..841 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:48:43 Download gff for BO10686.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9234881..9235575 147..841 99 <- Minus
2R 9246765..9246904 7..146 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:02:33 Download gff for BO10686.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5122386..5123080 147..841 99 <- Minus
arm_2R 5134270..5134409 7..146 97   Minus

BO10686.complete Sequence

2632 bp assembled on 2008-08-15

GenBank Submission: FJ631846

> BO10686.complete
GAAGTTATCAGTCGACATGTGGAGCAGGCAGCGAATGCGCCATAAGCCGC
TTTGGGCCCTAATATCCTTGACCGTTTTGCTGCTGGTCCTGGACAAAAGC
AATGCCAACACGGAGCCCGTCGAGACCAGCACCACATCCGAGCCAGATGC
CTCGCCAGGCTGTCGGGCGCCGGATGTGCGCTTCACGATTGTCAAGCCGG
AAGCGACGACGGAGCAGCCGCTGGCCAAATTCGAGACCACGCAGATCTAC
CTGCCGGAGGACTTCACCACGGCGGATGTGGAGTTCGTGGACTCGGTGCC
GCGTCACCCCAACGAAAACCATGCGGCCGTAATCAATCCGTACTCGCTGG
ACCTGGGCGACGACCACTTGCATGTGGGCGATGCGGCCGCCAGTTTGGTT
GGCGACGATGATCTGGGTGACGAGGACGAGGACCACCACGGGGACCCGGA
GGATAAGCGCTTAAATGCCAATCGCAAGCAGGGCAAACGAAGGCGCGCGG
GCTCAGGCCGTCGGCGGAGGATTGAGAATGAAAATGGACAGACAGGCAGG
GGTCGTGGCAGTCGATATAAGCGGCATGCCATTCTCCATGACACGGAAGC
CTCACCGGAAACGGATCGCTGGGCGGGCAGCAAGCTGGCAGCCGAAGGGG
ATGTGTACTATGTCCACATAGCCGATATCCTGAAGAGCCGTGAGCCAAAT
CGTGAATTGAAATCGAAGCTGCACAAGCTCAAAATGAAGGCCAGACTGAA
CAAGTGCCTGGCGGAAGGTGGCAAGGAGAAGTGCACAAGGCTCCTCAAGA
AGAAGCCCAAGAAGAAGGTCGTCGAGAAGGAGCAGACCCTGAAGAAGGAG
AAGAAGTTCCCCAAAGAAGAACAGTCCAAGGAAAAGGTACCCGAGAACGG
ACAAACACCAAAGGAGGACGAACTGGAACTGGACCATCCGGAGACCGCTG
CTGCTCATCACCGCCGCCGCGGGGACAGTCACGCTGCAGAGCTCGACCAG
CGTGACCGGAGCCCGCGATGGCGCCGCCGGCGCAGCACCGAGTTCAAGGG
CGATCTCGGCCAGCTGCCACCGGAGTCCGGAATCGGGCCGGAGCCGGAAC
CGCTAGCGGATCAGGATCTAAAGGATCTTCAGCAGTACGGAAATCAGTCG
AGCAGTGCACGAGTGGCCCTGTTGTGGCAACGTGTTAAGCGCAAGTCCGG
CAAGACCACGGGTGCACTGAGCCGTCCGAAGGGTGGTGGCGACTCCAGCT
CCAAGACCACCAGTCGCAAGGACAAGGGTATCTACGACGAGGAGGCTGGC
TACACGCCCATCCATCCAGATGACCCGGAGTTCGACGAGGAGGAGGAGGA
GGACGAGGAGGTCGACATCCTGCAGCAGTTCACCGAAGTGTCGGAGATTC
GCTTCCCGGGCGAAATCGGACCCATGGGCGATCGGCGGCTATGCAAGATC
CGTTGCGTCAAGGGCAAGTGGGTGGGTCCGTTGTGCGCCACCAACGAGGA
GGACGATAATGGGAATGTGAAGTTTCAGCCGCTCTACAAGAGCTGTCACG
TAAACCGGATACCATCGCACTTGCTGCTCAGCTACCGCAACATTTCAGTG
AATGTGGGATGGGATCTGCCGCACGGACACTCTCTGCAGGCACGCTGCCA
GGAGCTGGGCATCTACAAGCTCCTGGGAGAGTCGAGGGTCCTCTGCTCCA
ACGGCCTGTGGGCACCGCGGATGCCCAGCTGCGTCCCCACCACGGTGCTG
ACCAACTACTCGGAGGACAGCGCCCCATCGATCCGCATCAAGATCTTCAA
TGGCTCCCACTCCTTTGAGCCATCCGGCGTCATGGCCGTTCCGCCGCACA
GCACAGTGCTCATGGACTGCATGTATCCGAGGGTTAGGGGCACTCCGGAA
TGGAGCTGGACCAGCTGGTACATGCAGTATTCTACAGGATGGTCTCCAGC
CCAGGAGGAGAAAGCGGTGCGCTACCGGCTGAGCATCAAGAATATCGAGA
ACAACGACTCCGGCACCTTCACCTGCACCTCGCCGCGCGGACTGACCAAC
AGCATTGCCGTCGTGGTGGCCACTTCGACGTGTCCGCAGCTAACAGAGCC
GCTGGCGCCGCTCAAGCTGCGCCTCGAGGGCAATAAGCTGGGCCAGCGGG
CGCACTACGAGTGCCCCGAGGGCTTCCGGCTCGACGGCGCCTGGAACGCC
ACCTGCCTGGCCTCCGGCAATTGGTCATCGCCGACGCCGACCTGCCATGC
CATTCAGTGTCCACGTCTGGAGCTGGACGACCCGCACCTCAGCCTGATCG
AGCTGAACACCTCGGCATGGGGGCGGGCGGTGTTCAAATGCCAGTGGGGC
TTCAAGCTGACCGGACCGGCGCAGCTGGACTGTGAGCCGTCGGGCGTCTG
GAGTGGCCCCGTTCCGCGTTGCAAAGTCATTCAGTGCGTGATGCCAGTGG
CGCCGCTCAACGGGCGCATCGGGGGCACCAGCCTGAGCCAGAGGCGCCTC
ACCGTGGGCGCCCTGGTCACGTTTAGCTGCAACGACGGGCACAGCCTGGT
GGGCGAGTCGAGCATCATCTGCACGGAGAACGGACAGTGGTCGCACTCGC
CGCCATTTTGTAAGGCAAGCTTTCTAGACCAT

BO10686.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
hig-RC 2601 CG2040-PC 1..2598 17..2614 12990 100 Plus
hig-RB 2802 CG2040-PB 1..2594 17..2610 12970 100 Plus
hig-RD 2676 CG2040-PD 1..1585 17..1601 7925 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
hig-RC 4257 CG2040-RC 353..2953 14..2614 13005 100 Plus
hig-RB 3951 CG2040-RB 353..2949 14..2610 12985 100 Plus
hig-RD 4332 CG2040-RD 353..1940 14..1601 7940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:39:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9234443..9235578 1279..144 5680 100 Minus
2R 25286936 2R 9229598..9230091 2426..1933 2470 100 Minus
2R 25286936 2R 9230311..9230649 1938..1600 1695 100 Minus
2R 25286936 2R 9232508..9232733 1502..1277 1130 100 Minus
2R 25286936 2R 9229089..9229278 2614..2425 950 100 Minus
2R 25286936 2R 9246765..9246897 146..14 665 100 Minus
2R 25286936 2R 9231748..9231846 1600..1502 495 100 Minus
Blast to na_te.dros performed on 2014-11-27 19:39:57 has no hits.

BO10686.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:47:38 Download gff for BO10686.complete
Subject Subject Range Query Range Percent Splice Strand
hig-RC 344..2951 7..2614 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:50 Download gff for BO10686.complete
Subject Subject Range Query Range Percent Splice Strand
hig-RC 356..2953 17..2616 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:12:26 Download gff for BO10686.complete
Subject Subject Range Query Range Percent Splice Strand
hig-RC 354..2951 17..2616 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:05:54 Download gff for BO10686.complete
Subject Subject Range Query Range Percent Splice Strand
hig-RC 356..2953 17..2616 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:05:54 Download gff for BO10686.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9231748..9231845 1503..1600 100 <- Minus
2R 9232508..9232732 1278..1502 100 <- Minus
2R 9230312..9230648 1601..1937 100 <- Minus
2R 9229087..9229276 2427..2616 98 <- Minus
2R 9229598..9230086 1938..2426 100 <- Minus
2R 9234445..9235575 147..1277 100 <- Minus
2R 9246765..9246894 17..146 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:50 Download gff for BO10686.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5120013..5120237 1278..1502 100 <- Minus
arm_2R 5116592..5116781 2427..2616 98 <- Minus
arm_2R 5117103..5117591 1938..2426 100 <- Minus
arm_2R 5117817..5118153 1601..1937 100 <- Minus
arm_2R 5119253..5119350 1503..1600 100 <- Minus
arm_2R 5121950..5123080 147..1277 100 <- Minus
arm_2R 5134270..5134399 17..146 100   Minus

BO10686.pep Sequence

Translation from 16 to 2632

> BO10686.pep
MWSRQRMRHKPLWALISLTVLLLVLDKSNANTEPVETSTTSEPDASPGCR
APDVRFTIVKPEATTEQPLAKFETTQIYLPEDFTTADVEFVDSVPRHPNE
NHAAVINPYSLDLGDDHLHVGDAAASLVGDDDLGDEDEDHHGDPEDKRLN
ANRKQGKRRRAGSGRRRRIENENGQTGRGRGSRYKRHAILHDTEASPETD
RWAGSKLAAEGDVYYVHIADILKSREPNRELKSKLHKLKMKARLNKCLAE
GGKEKCTRLLKKKPKKKVVEKEQTLKKEKKFPKEEQSKEKVPENGQTPKE
DELELDHPETAAAHHRRRGDSHAAELDQRDRSPRWRRRRSTEFKGDLGQL
PPESGIGPEPEPLADQDLKDLQQYGNQSSSARVALLWQRVKRKSGKTTGA
LSRPKGGGDSSSKTTSRKDKGIYDEEAGYTPIHPDDPEFDEEEEEDEEVD
ILQQFTEVSEIRFPGEIGPMGDRRLCKIRCVKGKWVGPLCATNEEDDNGN
VKFQPLYKSCHVNRIPSHLLLSYRNISVNVGWDLPHGHSLQARCQELGIY
KLLGESRVLCSNGLWAPRMPSCVPTTVLTNYSEDSAPSIRIKIFNGSHSF
EPSGVMAVPPHSTVLMDCMYPRVRGTPEWSWTSWYMQYSTGWSPAQEEKA
VRYRLSIKNIENNDSGTFTCTSPRGLTNSIAVVVATSTCPQLTEPLAPLK
LRLEGNKLGQRAHYECPEGFRLDGAWNATCLASGNWSSPTPTCHAIQCPR
LELDDPHLSLIELNTSAWGRAVFKCQWGFKLTGPAQLDCEPSGVWSGPVP
RCKVIQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLVGESSI
ICTENGQWSHSPPFCKASFLDH

BO10686.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:31:26
Subject Length Description Subject Range Query Range Score Percent Strand
hig-PB 933 CG2040-PB 1..867 1..867 4669 99.9 Plus
hig-PC 866 CG2040-PC 1..866 1..866 4668 100 Plus
hig-PA 958 CG2040-PA 1..892 1..867 4633 97.1 Plus
hig-PD 891 CG2040-PD 1..891 1..866 4632 97.2 Plus
CG10186-PA 1676 CG10186-PA 1198..1582 471..865 531 31.1 Plus
hig-PB 933 CG2040-PB 748..929 689..867 178 30.6 Plus
hig-PA 958 CG2040-PA 773..954 689..867 178 30.6 Plus