Clone Sequence Records
BO10703.3prime Sequence
903 bp (761 high quality bases) assembled on 2006-04-19
> BO10703.3prime
ATGGTCTAGAAAGCTTGCCGAATATATTGTGCGCTCTATCCACTCCTCCA
ACGTAAAGGTGGCTGTTTCGTTCTTCTCGGTGTCGCGCTCCTTGAATATA
TCAATATATGTCTTGATTTTAACAGCGCACATGATAAAATCATCGAAGGC
TATTTTGCCATCACGAGAACCATATCGATGGCCCAAAACATTTAGAACAC
GATTGTTTAGATGATAGCCAGCAGAGTTAAGAGCTTCGCGAAGCTGGAAT
CCGGATACCCTGCCCGTATTCTCAACATCATAGACCTTAAATATGGCCTT
CCATTTGGCAATTTCCGAGAGCAAAGTCTCGAACTCCTCGAATCCCAGCT
TTCCAGACTTATCAGCATCCAACATGGCAACCATGGAGCGGCAAACATCC
TTGGAAAAGCCATGAGTCTCATCCACAATTGCATTTGCTGTTACAGGACC
TCCATCCGCCGGATTGTCCCCTATCAGCCTCTTGTTCGACTGATCATTCA
TTCCCAACTGCTCCTCGAATGGCGTACCCTTCAAAAACGGTCCACAAATC
AAGGATAAAAGTCCACAAGCGCCAGCTCCATCGTCACCAGGGCCAGCAGC
CTGGGTCTCAAAGGCCATGTTATTGGAGAAACGGTTGAAAACCACTGGTT
TGGGTAAATCGTCCCTCATCGAATGGTCCAAAATGCGTTTCAATTCCATC
CAATCCACCTCCATGTCCTTGCCGGCAATGCTGTCGAAGAGGCGTCGCAA
GCCCTCCTTCTGAGGATCGATGGGCTTGGGTGTTGGGAATCCTGGCGTAA
TCGTATCGGCTTTGCCGCCATAACCCACATGATCATCATTCTCTTCCATG
TTATTTTGAGTTTCTGAGAACACTCGAATGATGAACTCTCCCTCCTCGTT
TGG
BO10703.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:08:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7563-PB | 2487 | CalpA-RB | 1600..2484 | 903..19 | 4425 | 100 | Minus |
| CG7563-PA | 1698 | CalpA-RA | 1600..1658 | 903..845 | 295 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:59:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2889 | CG7563-RC | 1737..2621 | 903..19 | 4425 | 100 | Minus |
| CalpA-RD | 2934 | CG7563-RD | 1782..2666 | 903..19 | 4425 | 100 | Minus |
| CalpA-RB | 2797 | CG7563-RB | 1645..2529 | 903..19 | 4425 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:59:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19429822..19430152 | 432..102 | 1655 | 100 | Minus |
| 2R | 25286936 | 2R | 19429537..19429765 | 660..432 | 1145 | 100 | Minus |
| 2R | 25286936 | 2R | 19429337..19429479 | 802..660 | 715 | 100 | Minus |
| 2R | 25286936 | 2R | 19430213..19430296 | 102..19 | 420 | 100 | Minus |
| 2R | 25286936 | 2R | 19428486..19428544 | 903..845 | 295 | 100 | Minus |
| 2R | 25286936 | 2R | 19429237..19429279 | 844..802 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:59:42 has no hits.
BO10703.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:46:41 Download gff for
BO10703.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-PB | 1600..2487 | 15..903 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:02:50 Download gff for
BO10703.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7563-PB | 1600..2487 | 15..903 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:26:45 Download gff for
BO10703.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 1645..2534 | 14..903 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:36:33 Download gff for
BO10703.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 1645..2534 | 14..903 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:36:33 Download gff for
BO10703.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19428486..19428544 | 845..903 | 100 | -> | Minus |
| 2R | 19429237..19429279 | 802..844 | 100 | -> | Minus |
| 2R | 19429338..19429479 | 660..801 | 100 | -> | Minus |
| 2R | 19429538..19429765 | 432..659 | 100 | -> | Minus |
| 2R | 19429823..19430152 | 102..431 | 100 | -> | Minus |
| 2R | 19430214..19430301 | 14..101 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:26:45 Download gff for
BO10703.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15315991..15316049 | 845..903 | 100 | -> | Minus |
| arm_2R | 15316742..15316784 | 802..844 | 100 | -> | Minus |
| arm_2R | 15316843..15316984 | 660..801 | 100 | -> | Minus |
| arm_2R | 15317043..15317270 | 432..659 | 100 | -> | Minus |
| arm_2R | 15317328..15317657 | 102..431 | 100 | -> | Minus |
| arm_2R | 15317719..15317806 | 14..101 | 97 | | Minus |
BO10703.5prime Sequence
936 bp (777 high quality bases) assembled on 2006-04-19
> BO10703.5prime
GAAGTTATCAGTCGACATGGACGACTTGAGGGGATTCTTGAGGCAAGCGG
GACAGGAGTTCCTCAATGCAGCTGGTGAGGCTGCAATGGGAGCGGCCAAG
GATGTGGTCGGATCGGTGATCAACGAGATCTTCATCAAGAAGGAGGCCGA
CACCAAGAGGGTTCTGCCCAGCATCAAGAATATGAGAGTTCTGGGAGAGA
AGAGCTCGAGCCTGGGACCCTATTCCGAGGTGCAGGACTATGAGACAATA
TTGAACAGCTGCCTGGCCAGTGGTTCCCTTTTCGAAGATCCACTTTTTCC
GGCTTCGAACGAGTCTCTTCAGTTTTCCCGGCGTCCAGATCGTCACATCG
AATGGCTGAGACCTCATGAAATTGCCGAGAATCCCCAGTTTTTTGTGGAG
GGTTATTCGCGTTTTGATGTTCAGCAAGGCGAGCTTGGTGACTGTTGGCT
CTTGGCTGCCACAGCCAATTTAACTCAGGAATCCAACCTTTTCTTTCGGG
TAATTCCAGCGGAACAGAGTTTCGAGGAGAACTATGCTGGTATCTTCCAT
TTCCGCTTTTGGCAGTATGGTAAATGGGTTGATGTAATCATTGATGACCG
TTTGCCCACTTATAATGGAGAGCTGATGTACATGCACTCCACGGAGAAGA
ACGAGTTCTGGAGCGCCCTGCTGGAGAAGGCTTATGCCAAACTTCATGGA
TCCTACGAGGCACTAAAGGGAGGCAGCACTTGCGAGGCCATGGAGGACTT
TACTGGCGGCGTATCCGAGTGGTACGATTTAAAAGAAGCACCCGGCAATC
TATTCACCATTCTGCAAAAAGCAGCTGAACGCAATTCCATGANTGGGATG
CTCGATTGAGCCTGATCCAAATGTCACGGAGGCAGAAACTCCTCAGGGCT
TAATCCGTGGTCACGCTTACTCCATAACCAAGGTTT
BO10703.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:08:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7563-PB | 2487 | CalpA-RB | 1..826 | 17..842 | 4130 | 100 | Plus |
| CG7563-PA | 1698 | CalpA-RA | 1..826 | 17..842 | 4130 | 100 | Plus |
| CG7563-PB | 2487 | CalpA-RB | 827..919 | 844..936 | 465 | 100 | Plus |
| CG7563-PA | 1698 | CalpA-RA | 827..919 | 844..936 | 465 | 100 | Plus |
| CG8107-PA | 2778 | CalpB-RA | 1085..1274 | 588..777 | 450 | 89.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2889 | CG7563-RC | 138..1056 | 17..936 | 4575 | 99.9 | Plus |
| CalpA-RA | 2301 | CG7563-RA | 138..1056 | 17..936 | 4575 | 99.9 | Plus |
| CalpA-RB | 2797 | CG7563-RB | 46..964 | 17..936 | 4575 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19427378..19427622 | 691..936 | 1180 | 99.6 | Plus |
| 2R | 25286936 | 2R | 19426630..19426807 | 191..368 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 19426045..19426218 | 17..190 | 870 | 100 | Plus |
| 2R | 25286936 | 2R | 19427013..19427144 | 444..575 | 660 | 100 | Plus |
| 3L | 28110227 | 3L | 9890292..9890566 | 446..720 | 640 | 82.2 | Plus |
| 2R | 25286936 | 2R | 19427200..19427321 | 569..690 | 610 | 100 | Plus |
| 2R | 25286936 | 2R | 19426868..19426944 | 368..444 | 385 | 100 | Plus |
| 3L | 28110227 | 3L | 9890786..9890997 | 722..934 | 265 | 76.1 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:46:33 has no hits.
BO10703.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:46:42 Download gff for
BO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-PA | 1..919 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:02:51 Download gff for
BO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7563-PA | 1..919 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:27:17 Download gff for
BO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 36..964 | 6..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:02:20 Download gff for
BO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 36..964 | 6..936 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:02:20 Download gff for
BO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19426035..19426218 | 6..190 | 97 | -> | Plus |
| 2R | 19426630..19426806 | 191..367 | 100 | -> | Plus |
| 2R | 19426868..19426944 | 368..444 | 100 | -> | Plus |
| 2R | 19427014..19427138 | 445..569 | 100 | -> | Plus |
| 2R | 19427201..19427321 | 570..690 | 100 | -> | Plus |
| 2R | 19427378..19427622 | 691..936 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:27:17 Download gff for
BO10703.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15313540..15313723 | 6..190 | 97 | -> | Plus |
| arm_2R | 15314135..15314311 | 191..367 | 100 | -> | Plus |
| arm_2R | 15314373..15314449 | 368..444 | 100 | -> | Plus |
| arm_2R | 15314519..15314643 | 445..569 | 100 | -> | Plus |
| arm_2R | 15314706..15314826 | 570..690 | 100 | -> | Plus |
| arm_2R | 15314883..15315127 | 691..936 | 99 | | Plus |
BO10703.complete Sequence
2518 bp assembled on 2007-11-02
GenBank Submission: FJ631850
> BO10703.complete
GAAGTTATCAGTCGACATGGACGACTTGAGGGGATTCTTGAGGCAAGCGG
GACAGGAGTTCCTCAATGCAGCTGGTGAGGCTGCAATGGGAGCGGCCAAG
GATGTGGTCGGATCGGTGATCAACGAGATCTTCATCAAGAAGGAGGCCGA
CACCAAGAGGGTTCTGCCCAGCATCAAGAATATGAGAGTTCTGGGAGAGA
AGAGCTCGAGCCTGGGACCCTATTCCGAGGTGCAGGACTATGAGACAATA
TTGAACAGCTGCCTGGCCAGTGGTTCCCTTTTCGAAGATCCACTTTTTCC
GGCTTCGAACGAGTCTCTTCAGTTTTCCCGGCGTCCAGATCGTCACATCG
AATGGCTGAGACCTCATGAAATTGCCGAGAATCCCCAGTTTTTTGTGGAG
GGTTATTCGCGTTTTGATGTTCAGCAAGGCGAGCTTGGTGACTGTTGGCT
CTTGGCTGCCACAGCCAATTTAACTCAGGAATCCAACCTTTTCTTTCGGG
TAATTCCAGCGGAACAGAGTTTCGAGGAGAACTATGCTGGTATCTTCCAT
TTCCGCTTTTGGCAGTATGGTAAATGGGTTGATGTAATCATTGATGACCG
TTTGCCCACTTATAATGGAGAGCTGATGTACATGCACTCCACGGAGAAGA
ACGAGTTCTGGAGCGCCCTGCTGGAGAAGGCTTATGCCAAACTTCATGGA
TCCTACGAGGCACTAAAGGGAGGCAGCACTTGCGAGGCCATGGAGGACTT
TACTGGCGGCGTATCCGAGTGGTACGATTTAAAAGAAGCACCCGGCAATC
TATTCACCATTCTGCAAAAAGCAGCTGAACGCAATTCCATGATGGGATGC
TCGATTGAGCCTGATCCAAATGTCACGGAGGCAGAAACTCCTCAGGGCTT
AATCCGTGGTCACGCTTACTCCATAACCAAGGTTTGCCTTATTGACATAG
TAACGCCAAATCGTCAGGGAAAGATCCCTATGATAAGAATGCGAAATCCT
TGGGGCAATGAAGCCGAGTGGAATGGACCATGGAGTGATAGCTCACCAGA
ATGGCGCTATATACCCGAGGAACAGAAGGCGGAGATTGGACTAACATTCG
ACAGAGACGGAGAGTTCTGGATGTCCTTCCAAGATTTTCTTAACCACTTC
GATCGCGTGGAGATTTGCAATTTGTCGCCGGACTCACTGACCGAGGACCA
ACAAAACAGTGGCAAGCGAAAGTGGGAGATGTCCATGTATGAGGGAGAAT
GGACACCCGGTGTTACAGCTGGTGGTTGCCGCAATTTCCTGGATACCTTC
TGGCACAACCCCCAGTATATTATCACCCTAGTCGATCCTGATGAGGAAGA
CGAAGAGGGACAGTGCACCGTCATCGTGGCCTTAATGCAAAAGAATCGCA
GATCGAAGCGCAATATGGGAATGGAGTGTCTGACCATTGGTTTCGCTATC
TATAGCCTTAATGATCGCGAACTGGAAAACCGTCCCCAGGGTCTGAACTT
TTTCAGATACAAGTCTTCTGTGGGAAGATCGCCGCACTTTATCAACACCC
GCGAAGTGTGTGCTCGCTTCAAATTGCCTCCTGGTCACTACCTGATTGTG
CCTTCAACATTCGATCCAAACGAGGAGGGAGAGTTCATCATTCGAGTGTT
CTCAGAAACTCAAAATAACATGGAAGAGAATGATGATCATGTGGGTTATG
GCGGCAAAGCCGATACGATTACGCCAGGATTCCCAACACCCAAGCCCATC
GATCCTCAGAAGGAGGGCTTGCGACGCCTCTTCGACAGCATTGCCGGCAA
GGACATGGAGGTGGATTGGATGGAATTGAAACGCATTTTGGACCATTCGA
TGAGGGACGATTTACCCAAACCAGTGGTTTTCAACCGTTTCTCCAATAAC
ATGGCCTTTGAGACCCAGGCTGCTGGCCCTGGTGACGATGGAGCTGGCGC
TTGTGGACTTTTATCCTTGATTTGTGGACCGTTTTTGAAGGGTACGCCAT
TCGAGGAGCAGTTGGGAATGAATGATCAGTCGAACAAGAGGCTGATAGGG
GACAATCCGGCGGATGGAGGTCCTGTAACAGCAAATGCAATTGTGGATGA
GACTCATGGCTTTTCCAAGGATGTTTGCCGCTCCATGGTTGCCATGTTGG
ATGCTGATAAGTCTGGAAAGCTGGGATTCGAGGAGTTCGAGACTTTGCTC
TCGGAAATTGCCAAATGGAAGGCCATATTTAAGGTCTATGATGTTGAGAA
TACGGGCAGGGTATCCGGATTCCAGCTTCGCGAAGCTCTTAACTCTGCTG
GCTATCATCTAAACAATCGTGTTCTAAATGTTTTGGGCCATCGATATGGT
TCTCGTGATGGCAAAATAGCCTTCGATGATTTTATCATGTGCGCTGTTAA
AATCAAGACATATATTGATATATTCAAGGAGCGCGACACCGAGAAGAACG
AAACAGCCACCTTTACGTTGGAGGAGTGGATAGAGCGCACAATATATTCG
GCAAGCTTTCTAGACCAT
BO10703.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2487 | CG7563-PC | 1..2484 | 17..2500 | 12405 | 100 | Plus |
| CalpA-RB | 2487 | CG7563-PB | 1..2484 | 17..2500 | 12405 | 100 | Plus |
| CalpA-RD | 2532 | CG7563-PD | 220..2529 | 191..2500 | 11535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:32:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-RC | 2889 | CG7563-RC | 138..2621 | 17..2500 | 12405 | 100 | Plus |
| CalpA-RB | 2797 | CG7563-RB | 46..2529 | 17..2500 | 12405 | 100 | Plus |
| CalpA-RD | 2934 | CG7563-RD | 357..2666 | 191..2500 | 11535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:32:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19427968..19428364 | 1161..1557 | 1985 | 100 | Plus |
| 2R | 25286936 | 2R | 19429822..19430152 | 2087..2417 | 1655 | 100 | Plus |
| 2R | 25286936 | 2R | 19427378..19427623 | 691..936 | 1230 | 100 | Plus |
| 3L | 28110227 | 3L | 9890786..9891767 | 722..1703 | 1220 | 74.9 | Plus |
| 2R | 25286936 | 2R | 19427675..19427907 | 930..1162 | 1165 | 100 | Plus |
| 2R | 25286936 | 2R | 19429537..19429765 | 1859..2087 | 1145 | 100 | Plus |
| 2R | 25286936 | 2R | 19426630..19426807 | 191..368 | 890 | 100 | Plus |
| 2R | 25286936 | 2R | 19426045..19426218 | 17..190 | 870 | 100 | Plus |
| 2R | 25286936 | 2R | 19429337..19429479 | 1717..1859 | 715 | 100 | Plus |
| 2R | 25286936 | 2R | 19427013..19427144 | 444..575 | 660 | 100 | Plus |
| 3L | 28110227 | 3L | 9890292..9890566 | 446..720 | 640 | 82.2 | Plus |
| 2R | 25286936 | 2R | 19427200..19427321 | 569..690 | 610 | 100 | Plus |
| 2R | 25286936 | 2R | 19428426..19428544 | 1556..1674 | 580 | 99.2 | Plus |
| 2R | 25286936 | 2R | 19430213..19430296 | 2417..2500 | 420 | 100 | Plus |
| 2R | 25286936 | 2R | 19426868..19426944 | 368..444 | 385 | 100 | Plus |
| 2R | 25286936 | 2R | 19429237..19429279 | 1675..1717 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:32:18 has no hits.
BO10703.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:36 Download gff for
BO10703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RC | 1..2487 | 17..2504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:07:13 Download gff for
BO10703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RC | 168..2666 | 6..2505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:54:12 Download gff for
BO10703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 46..2529 | 17..2502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:45:22 Download gff for
BO10703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RC | 178..2661 | 17..2502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:14 Download gff for
BO10703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CalpA-RB | 46..2529 | 17..2502 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:14 Download gff for
BO10703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19429538..19429765 | 1860..2087 | 100 | -> | Plus |
| 2R | 19429823..19430152 | 2088..2417 | 100 | -> | Plus |
| 2R | 19430214..19430296 | 2418..2502 | 97 | | Plus |
| 2R | 19426045..19426218 | 17..190 | 100 | -> | Plus |
| 2R | 19426630..19426806 | 191..367 | 100 | -> | Plus |
| 2R | 19426868..19426944 | 368..444 | 100 | -> | Plus |
| 2R | 19427014..19427138 | 445..569 | 100 | -> | Plus |
| 2R | 19427201..19427321 | 570..690 | 100 | -> | Plus |
| 2R | 19427378..19427618 | 691..931 | 100 | -> | Plus |
| 2R | 19427677..19427907 | 932..1162 | 100 | -> | Plus |
| 2R | 19427970..19428362 | 1163..1555 | 100 | -> | Plus |
| 2R | 19428426..19428544 | 1556..1674 | 99 | -> | Plus |
| 2R | 19429237..19429279 | 1675..1717 | 100 | -> | Plus |
| 2R | 19429338..19429479 | 1718..1859 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:54:12 Download gff for
BO10703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15317043..15317270 | 1860..2087 | 100 | -> | Plus |
| arm_2R | 15317328..15317657 | 2088..2417 | 100 | -> | Plus |
| arm_2R | 15317719..15317801 | 2418..2502 | 97 | | Plus |
| arm_2R | 15313550..15313723 | 17..190 | 100 | -> | Plus |
| arm_2R | 15314135..15314311 | 191..367 | 100 | -> | Plus |
| arm_2R | 15314373..15314449 | 368..444 | 100 | -> | Plus |
| arm_2R | 15314519..15314643 | 445..569 | 100 | -> | Plus |
| arm_2R | 15314706..15314826 | 570..690 | 100 | -> | Plus |
| arm_2R | 15314883..15315123 | 691..931 | 100 | -> | Plus |
| arm_2R | 15315182..15315412 | 932..1162 | 100 | -> | Plus |
| arm_2R | 15315475..15315867 | 1163..1555 | 100 | -> | Plus |
| arm_2R | 15315931..15316049 | 1556..1674 | 99 | -> | Plus |
| arm_2R | 15316742..15316784 | 1675..1717 | 100 | -> | Plus |
| arm_2R | 15316843..15316984 | 1718..1859 | 100 | -> | Plus |
BO10703.pep Sequence
Translation from 16 to 2518
> BO10703.pep
MDDLRGFLRQAGQEFLNAAGEAAMGAAKDVVGSVINEIFIKKEADTKRVL
PSIKNMRVLGEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNES
LQFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGELGDCWLLAATA
NLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDRLPTYN
GELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVS
EWYDLKEAPGNLFTILQKAAERNSMMGCSIEPDPNVTEAETPQGLIRGHA
YSITKVCLIDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIP
EEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQNSGK
RKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLVDPDEEDEEGQC
TVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGLNFFRYKS
SVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQN
NMEENDDHVGYGGKADTITPGFPTPKPIDPQKEGLRRLFDSIAGKDMEVD
WMELKRILDHSMRDDLPKPVVFNRFSNNMAFETQAAGPGDDGAGACGLLS
LICGPFLKGTPFEEQLGMNDQSNKRLIGDNPADGGPVTANAIVDETHGFS
KDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVENTGRVS
GFQLREALNSAGYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYI
DIFKERDTEKNETATFTLEEWIERTIYSASFLDH
BO10703.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:02:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CalpA-PC | 828 | CG7563-PC | 1..828 | 1..828 | 4437 | 100 | Plus |
| CalpA-PB | 828 | CG7563-PB | 1..828 | 1..828 | 4437 | 100 | Plus |
| CalpA-PD | 843 | CG7563-PD | 1..843 | 1..828 | 4411 | 98.2 | Plus |
| CalpA-PA | 565 | CG7563-PA | 1..565 | 1..561 | 2982 | 98.4 | Plus |
| CalpB-PB | 925 | CG8107-PB | 220..788 | 50..614 | 2506 | 78.9 | Plus |
