Clone BO10719 Report

Search the DGRC for BO10719

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:107
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG8010-RA
Protein status:BO10719.pep: validated full length
Sequenced Size:1183

Clone Sequence Records

BO10719.3prime Sequence

984 bp (821 high quality bases) assembled on 2006-04-19

> BO10719.3prime
ATGGTCTAGAAAGCTTGCGACTCTGAGTGTCATGGCATCGGCCTCGACTC
CCAGCTTCTGTTGCTCCAGCTCCAGCTGCATCTGCTGCTGCTCCTGCTGG
AGCTCTTGATCCTCCTCCGTCTCCTCCAGAACCTCGCTCCTCTCCTCGTC
ACTGCTGCTTGGCGCTGGCGAGCTGAGCGTCACATCGCTGCCCAGGGCCA
ACAGTGGCTGGACATCCATGTCGGGAGCAAACTGCTTCAGCAGTTGTCCC
ACCACGGTGCACAGTCCCATCAGACGCTTCTCCATTCGCTGCTCGTAGCG
ACGGCGGTGCCTGTAATACTTCTCCTTTTCGCTGAGACCTTTGCGATGGT
GTTTCCTTAACAATTTACGCGCCTTCGGGATAGGCTTCTCCGGCTTCTCG
CTCTTCACAGCCGTTGCCGTGGGCACTGTCGCCTCCTCGAAGTCGTTGTA
TCTGCTGTTGGATAGCGACACCTCGCCGCCAATCATCACCGGGCCGCATT
CCATTTCGTGGCAGTTGGTGTTGCTCAGCATGCACACATCCTCGCCGTCG
CCAACTGCCGCATCCTTGCGCGCCGTCGCCTCGGCCAGCAGCCTGTCCAG
CTCATCGTTGTTGCTGTGGCCACTGTTCCCGTGGCAGGGCGACGTGTTGG
ACTCGTCCATGTCATCGGTGTCGCATCCGTTGGGCGGCGAGCGTTCGCCA
AAGTTGTGGTCATTGAGCACGCCCAGCATGAGTGGCGAGAGTTGCGCCTC
GTCGCAGGAGTAGACACTGGCGATGGCCAGGTTATTGTTCGGCTGCTCCA
CATTCGGCTCCTTGAGCGCGTACGAGTGCAGGTCGGCGGTCTTCTGGTTC
ATGTAGGCGTGGATGAGGCCGAAAAAACTCCATTCCTTGTTCAGCTCCTC
GATGCTCTGCTTGTTGAGTGGGACGCCCAGTGTGTTGGCCTTGTGGATGC
GGTACCGCTGCACCATGGAAAACCACTGCTTGCG

BO10719.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8010-PA 1152 CG8010-RA 292..1149 876..19 4290 100 Minus
CG8010-PA 1152 CG8010-RA 184..288 984..880 500 99 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 16:21:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG8010-RA 1633 CG8010-RA 364..1329 984..19 4770 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 16:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19267317..19267991 310..984 3315 99.4 Plus
X 23542271 X 19266960..19267254 19..313 1475 100 Plus
Blast to na_te.dros performed on 2015-02-03 16:21:51 has no hits.

BO10719.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:09 Download gff for BO10719.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-PA 184..1152 16..984 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:03:27 Download gff for BO10719.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-PA 184..1152 16..984 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:26:04 Download gff for BO10719.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 364..1334 13..984 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:53:21 Download gff for BO10719.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 364..1334 13..984 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:53:21 Download gff for BO10719.3prime
Subject Subject Range Query Range Percent Splice Strand
X 19266955..19267251 13..310 98 <- Plus
X 19267318..19267991 311..984 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:26:04 Download gff for BO10719.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19160988..19161284 13..310 98 <- Plus
arm_X 19161351..19162024 311..984 99   Plus

BO10719.5prime Sequence

941 bp (808 high quality bases) assembled on 2006-04-19

> BO10719.5prime
GAAGTTATCAGTCGACATGGACCACCACACGTACGCCAAGAGCGGATCCA
AGAAGTGGTCCGCGGAAGAGAAGCGCAACCTGGTGGTGCAGCGGATCGCG
GCGGACGAGCTCTTCTCCCGCTACTCACCGAAGCACGCGGAGCCATGGAA
AAAATTCAAGGAAATGGCCAAGATCGGCGATTTCAGCGAGATTGCGCTAC
GCAAGCAGTGGTTCTCCATGGTGCAGCGGTACCGCATCCACAAGGCCAAC
ACACTGGGCGTCCCACTCAACAAGCAGAGCATCGAGGAGCTGAACAAGGA
ATGGGAGTTTTTCGGCCTCATCCACGCCTACATGAACCAGAAGACCGCCG
ACCTGCACTCGTACGCGCTCAAGGAGCCGAATGTGGAGCAGCCGAACAAT
AACCTGGCCATCGCCAGTGTCTACTCCTGCGACGAGGCGCAACTCTCGCC
ACTCATGCTGGGCGTGCTCAATGACCACAACTTTGGCGAACGCTCGCCGC
CCAACGGATGCGACACCGATGACATGGACGAGTCCAACACGTCGCCCTGC
CACGGGAACAGTGGCCACAGCAACAACGATGAGCTGGACAGGCTGCTGGC
CGAGGCGACGGCGCGCAAGGATGCGGCAGTTGGCGACGGCGAGGATGTGT
GCATGCTGAGCAACACCAACTGCCACGAAATGGAATGCGGCCCGGTGATG
ATTGGCGGCGAGGTGTCGCTATCCAACAGCAGATACAACGACTTCGAGGA
GGCGACAGTGCCCACGGCAACGGCTGTGAAGAGCGAGAAGCCGGAGAAGC
CTATCCCGAANGCGCGTAAATTGTTAAGGGAACACCATCGCNAAGGTCTC
AGCGAAAAGGGAGAGTATTACAGGCACCGCCGTCGCTACGAGCAGCGAAT
GGAGAAGCGTCTGATGGGACTGTGCACCGTGGTGGGACACT

BO10719.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8010-PA 1152 CG8010-RA 1..844 17..860 4157 99.6 Plus
CG8010-PA 1152 CG8010-RA 848..923 864..939 380 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG8010-RA 1633 CG8010-RA 179..1103 15..939 4543 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19267317..19268040 874..151 3538 99.2 Minus
X 23542271 X 19268505..19268598 150..57 470 100 Minus
X 23542271 X 19267186..19267254 939..871 345 100 Minus
X 23542271 X 19268676..19268718 57..15 215 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:48:07 has no hits.

BO10719.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:09 Download gff for BO10719.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-PA 1..926 17..941 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:03:29 Download gff for BO10719.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-PA 1..926 17..941 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:02:47 Download gff for BO10719.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 169..1106 3..941 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:48:52 Download gff for BO10719.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 169..1106 3..941 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:48:52 Download gff for BO10719.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19267183..19267251 874..941 98 <- Minus
X 19267318..19268040 151..873 99 <- Minus
X 19268505..19268598 57..150 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:02:47 Download gff for BO10719.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19161216..19161284 874..941 98 <- Minus
arm_X 19161351..19162073 151..873 99 <- Minus
arm_X 19162538..19162631 57..150 100 <- Minus

BO10719.complete Sequence

1183 bp (1183 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631855

> BO10719.complete
GAAGTTATCAGTCGACATGGACCACCACACGTACGCCAAGAGCGGATCCA
AGAAGTGGTCCGCGGAAGAGAAGCGCAACCTGGTGGTGCAGCGGATCGCG
GCGGACGAGCTCTTCTCCCGCTACTCACCGAAGCACGCGGAGCCATGGAA
AAAATTCAAGGAAATGGCCAAGATCGGCGATTTCAGCGAGATTGCGCTAC
GCAAGCAGTGGTTCTCCATGGTGCAGCGGTACCGCATCCACAAGGCCAAC
ACACTGGGCGTCCCACTCAACAAGCAGAGCATCGAGGAGCTGAACAAGGA
ATGGGAGTTTTTCGGCCTCATCCACGCCTACATGAACCAGAAGACCGCCG
ACCTGCACTCGTACGCGCTCAAGGAGCCGAATGTGGAGCAGCCGAACAAT
AACCTGGCCATCGCCAGTGTCTACTCCTGCGACGAGGCGCAACTCTCGCC
ACTCATGCTGGGCGTGCTCAATGACCACAACTTTGGCGAACGCTCGCCGC
CCAACGGATGCGACACCGATGACATGGACGAGTCCAACACGTCGCCCTGC
CACGGGAACAGTGGCCACAGCAACAACGATGAGCTGGACAGGCTGCTGGC
CGAGGCGACGGCGCGCAAGGATGCGGCAGTTGGCGACGGCGAGGATGTGT
GCATGCTGAGCAACACCAACTGCCACGAAATGGAATGCGGCCCGGTGATG
ATTGGCGGCGAGGTGTCGCTATCCAACAGCAGATACAACGACTTCGAGGA
GGCGACAGTGCCCACGGCAACGGCTGTGAAGAGCGAGAAGCCGGAGAAGC
CTATCCCGAAGGCGCGTAAATTGTTAAGGAAACACCATCGCAAAGGTCTC
AGCGAAAAGGAGAAGTATTACAGGCACCGCCGTCGCTACGAGCAGCGAAT
GGAGAAGCGTCTGATGGGACTGTGCACCGTGGTGGGACAACTGCTGAAGC
AGTTTGCTCCCGACATGGATGTCCAGCCACTGTTGGCCCTGGGCAGCGAT
GTGACGCTCAGCTCGCCAGCGCCAAGCAGCAGTGACGAGGAGAGGAGCGA
GGTTCTGGAGGAGACGGAGGAGGATCAAGAGCTCCAGCAGGAGCAGCAGC
AGATGCAGCTGGAGCTGGAGCAACAGAAGCTGGGAGTCGAGGCCGATGCC
ATGACACTCAGAGTCGCAAGCTTTCTAGACCAT

BO10719.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:38:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG8010-RA 1152 CG8010-PA 1..1149 17..1165 5745 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:38:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG8010-RA 1633 CG8010-RA 179..1329 15..1165 5755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19267317..19268040 874..151 3620 100 Minus
X 23542271 X 19266960..19267254 1165..871 1475 100 Minus
X 23542271 X 19268505..19268598 150..57 470 100 Minus
X 23542271 X 19268676..19268718 57..15 215 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:38:46 has no hits.

BO10719.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:48:45 Download gff for BO10719.complete
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 1..1152 17..1168 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:03 Download gff for BO10719.complete
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 157..1322 3..1171 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:40:52 Download gff for BO10719.complete
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 181..1329 17..1167 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:48:45 Download gff for BO10719.complete
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 157..1322 3..1171 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:31 Download gff for BO10719.complete
Subject Subject Range Query Range Percent Splice Strand
CG8010-RA 181..1329 17..1167 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:31 Download gff for BO10719.complete
Subject Subject Range Query Range Percent Splice Strand
X 19266957..19267251 874..1167 99 <- Minus
X 19267318..19268040 151..873 100 <- Minus
X 19268505..19268598 57..150 100 <- Minus
X 19268677..19268716 17..56 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:40:52 Download gff for BO10719.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19160990..19161284 874..1167 99 <- Minus
arm_X 19161351..19162073 151..873 100 <- Minus
arm_X 19162538..19162631 57..150 100 <- Minus
arm_X 19162710..19162749 17..56 100   Minus

BO10719.pep Sequence

Translation from 16 to 1183

> BO10719.pep
MDHHTYAKSGSKKWSAEEKRNLVVQRIAADELFSRYSPKHAEPWKKFKEM
AKIGDFSEIALRKQWFSMVQRYRIHKANTLGVPLNKQSIEELNKEWEFFG
LIHAYMNQKTADLHSYALKEPNVEQPNNNLAIASVYSCDEAQLSPLMLGV
LNDHNFGERSPPNGCDTDDMDESNTSPCHGNSGHSNNDELDRLLAEATAR
KDAAVGDGEDVCMLSNTNCHEMECGPVMIGGEVSLSNSRYNDFEEATVPT
ATAVKSEKPEKPIPKARKLLRKHHRKGLSEKEKYYRHRRRYEQRMEKRLM
GLCTVVGQLLKQFAPDMDVQPLLALGSDVTLSSPAPSSSDEERSEVLEET
EEDQELQQEQQQMQLELEQQKLGVEADAMTLRVASFLDH

BO10719.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8010-PA 383 CG8010-PA 1..383 1..383 2009 100 Plus