Clone Sequence Records
BO10724.3prime Sequence
882 bp (805 high quality bases) assembled on 2006-04-19
> BO10724.3prime
ATGGTCTAGAAAGCTTGCCAACTTGGCGTTGACGTGAATGGCCAGCACTC
CATCGTCCTCGGAGCTGCCAATGTAGATGGAAGCCCGTCCGTCGGATCCG
ACGGTGACGGTCTTGCCCGTGCAGGAGGAGCCGCTCTTGGAGCCGGAAAT
GACGTCGCAGTAGGTGCCGGCGGGCAGGCCCGTCTGCAGGGAGCTGTTCA
GGTCGTAGTTGTCGTTGTTGAAGGCCACGAAGCCGCGGCTGCCTCGGCTG
AAGGAGATCTGGTTGCTGCCGTTGTCCCACCAGTTCTGGATCTCGTCCAA
GCCCACGGTGTTTCGGAAGGCCACCATGTTGTAGATCTGGCGCCAGCGGT
GCTCACACACCCAGCCGCCGCTGCAGGAGTTGTCGCTATTGAAGATGGGC
GAGGCGATGTTGTGGCCGTCGGTGGTGGGCGGGCCCTGATCGGTGTCCGT
GAAGGAGAAGGAGGACATCACGCGGGGAGTGCCGAAGGGGTGCGCCAGCA
TGAAGGCGGAGGCCATCTTGTACTGCTTGGGCACCTTGTAGGTCAGAACG
TCGGCGCCTCCTGCTCCATGTCCGCGCTGATTGTCGTGGTTGTCGACGAA
TACCAGGGAGCGGTCGGAGGCAGCGAAGCCCCAGGCGGTGCCCCAGTTGG
TCAGGTACTGCAGCTGGTCCTTGCCGCGGAAGACCTTGCCGATGGAGTCG
GAGTGGCGGAACTCGGTGATGGCGCCCAGTCCGGTGTACTCGGACTTGCT
GATGGCCTCGCCGCCCATGTCGATGACCTCCTGGACGATGTACGCCTTGG
ATCCCGAGGCGAAGCCGTGGTCGGTGTTCAGGTTCTTGAGGCGGCCATAG
ATGACGGCCAGGTCGGCGGGCCACATGTGCTT
BO10724.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:09:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18730-PA | 1485 | Amy-p-RA | 619..1482 | 882..19 | 4320 | 100 | Minus |
| CG17876-PA | 1485 | Amy-d-RA | 619..1482 | 882..19 | 4020 | 98.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:22:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-p-RB | 1668 | CG18730-RB | 652..1515 | 882..19 | 4320 | 100 | Minus |
| Amy-p-RA | 1595 | CG18730-RA | 652..1515 | 882..19 | 4320 | 100 | Minus |
| Amy-d-RA | 1606 | CG17876-RA | 655..1518 | 882..19 | 4140 | 98.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:22:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17118789..17119652 | 19..882 | 4320 | 100 | Plus |
| 2R | 25286936 | 2R | 17125418..17126281 | 882..19 | 4140 | 98.6 | Minus |
Blast to na_te.dros performed on 2015-02-09 02:22:44 has no hits.
BO10724.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:16 Download gff for
BO10724.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-PA | 619..1485 | 15..882 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:03:39 Download gff for
BO10724.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18730-PA | 619..1485 | 15..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:46:04 Download gff for
BO10724.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 652..1518 | 15..882 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:20:32 Download gff for
BO10724.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 652..1518 | 15..882 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:20:32 Download gff for
BO10724.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17118785..17119652 | 15..882 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:46:04 Download gff for
BO10724.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13006290..13007157 | 15..882 | 99 | | Plus |
BO10724.5prime Sequence
922 bp (827 high quality bases) assembled on 2006-04-19
> BO10724.5prime
GAAGTTATCAGTCGACATGTTTCTGGCCAAGAGCATAGTGTGCCTCGCCC
TCCTGGCGGTGGCTAACGCCCAATTCGACACCAACTACGCCTCCGGTCGT
AGTGGAATGGTCCACCTCTTCGAGTGGAAGTGGGACGACATCGCTGCCGA
GTGTGAGAACTTCCTGGGACCCAATGGCTACGCCGGTGTTCAGGTCTCCC
CTGTGAACGAGAACGCCGTCAAGGACAGCCGCCCCTGGTGGGAACGTTAC
CAACCCATCTCCTACAAGCTGGAGACCCGCTCCGGAAACGAGGAGCAGTT
CGCCAGCATGGTCAAGCGCTGCAACGCCGTCGGAGTGCGCACCTACGTGG
ACGTGGTCTTCAACCACATGGCCGCCGACGGAGGCACCTACGGCACTGGC
GGCAGCACCGCCAGCCCCAGCAGCAAGAGCTATCCCGGAGTGCCCTACTC
CTCGCTGGACTTCAACCCGACCTGCGCCATCAGCAACTACAACGACGCCA
ACGAGGTGCGCAACTGCGAGCTGGTCGGTCTGCGCGACCTTAACCAGGGC
AACTCCTACGTGCAGGACAAGGTGGTCGAGTTCCTGGACCATCTGATTGA
TCTCGGCGTGGCCGGATTCCGCGTGGACGCCGCCAAGCACATGTGGCCCG
CCGACCTGGCCGTCATCTATGGCCGCCTCAAGAACCTGAACACCGACCAC
GGCTTCGCCTCGGGATCCAAGGCGTACATCGTCCAGGAGGTCATCGACAT
GGGCGGCGAGGCCATCAGCAAGTCCGAGTACACCGGACTGGGCGCCATCA
CCGAGTTCCGCCACTCCGACTCCATCGGCAAGGTCTTCCGCGGCAAGGAC
CAGCTGCAGTACCTGACCCACTGGGGCACCGCCTGGGGCTTCGCTGCCTC
CGACCGCTCCCTGGTATTCGTC
BO10724.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:09:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18730-PA | 1485 | Amy-p-RA | 1..906 | 17..922 | 4505 | 99.8 | Plus |
| CG17876-PA | 1485 | Amy-d-RA | 1..906 | 17..922 | 4330 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:28:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-p-RB | 1668 | CG18730-RB | 33..939 | 16..922 | 4520 | 99.9 | Plus |
| Amy-p-RA | 1595 | CG18730-RA | 33..939 | 16..922 | 4520 | 99.9 | Plus |
| Amy-d-RA | 1606 | CG17876-RA | 36..942 | 16..922 | 4415 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:28:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17119365..17120271 | 922..16 | 4520 | 99.9 | Minus |
| 2R | 25286936 | 2R | 17124799..17125705 | 16..922 | 4415 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:28:16 has no hits.
BO10724.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:17 Download gff for
BO10724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-PA | 1..906 | 17..922 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:03:41 Download gff for
BO10724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18730-PA | 1..906 | 17..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:34:44 Download gff for
BO10724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 33..939 | 16..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:06:02 Download gff for
BO10724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 33..939 | 16..922 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:06:02 Download gff for
BO10724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17119365..17120271 | 16..922 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:34:44 Download gff for
BO10724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13006870..13007776 | 16..922 | 99 | | Minus |
BO10724.complete Sequence
1516 bp (1516 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ631856
> BO10724.complete
GAAGTTATCAGTCGACATGTTTCTGGCCAAGAGCATAGTGTGCCTCGCCC
TCCTGGCGGTGGCTAACGCCCAATTCGACACCAACTACGCCTCCGGTCGT
AGTGGAATGGTCCACCTCTTCGAGTGGAAGTGGGACGACATCGCTGCCGA
GTGTGAGAACTTCCTGGGACCCAATGGCTACGCCGGTGTTCAGGTCTCCC
CTGTGAACGAGAACGCCGTCAAGGACAGCCGCCCCTGGTGGGAACGTTAC
CAACCCATCTCCTACAAGCTGGAGACCCGCTCCGGAAACGAGGAGCAGTT
CGCCAGCATGGTCAAGCGCTGCAACGCCGTCGGAGTGCGCACCTACGTGG
ACGTGGTCTTCAACCACATGGCCGCCGACGGAGGCACCTACGGCACTGGC
GGCAGCACCGCCAGCCCCAGCAGCAAGAGCTATCCCGGAGTGCCCTACTC
CTCGCTGGACTTCAACCCGACCTGCGCCATCAGCAACTACAACGACGCCA
ACGAGGTGCGCAACTGCGAGCTGGTCGGTCTGCGCGACCTTAACCAGGGC
AACTCCTACGTGCAGGACAAGGTGGTCGAGTTCCTGGACCATCTGATTGA
TCTCGGCGTGGCCGGATTCCGCGTGGACGCCGCCAAGCACATGTGGCCCG
CCGACCTGGCCGTCATCTATGGCCGCCTCAAGAACCTGAACACCGACCAC
GGCTTCGCCTCGGGATCCAAGGCGTACATCGTCCAGGAGGTCATCGACAT
GGGCGGCGAGGCCATCAGCAAGTCCGAGTACACCGGACTGGGCGCCATCA
CCGAGTTCCGCCACTCCGACTCCATCGGCAAGGTCTTCCGCGGCAAGGAC
CAGCTGCAGTACCTGACCAACTGGGGCACCGCCTGGGGCTTCGCTGCCTC
CGACCGCTCCCTGGTATTCGTCGACAACCACGACAATCAGCGCGGACATG
GAGCAGGAGGCGCCGACGTTCTGACCTACAAGGTGCCCAAGCAGTACAAG
ATGGCCTCCGCCTTCATGCTGGCGCACCCCTTCGGCACTCCCCGCGTGAT
GTCCTCCTTCTCCTTCACGGACACCGATCAGGGCCCGCCCACCACCGACG
GCCACAACATCGCCTCGCCCATCTTCAATAGCGACAACTCCTGCAGCGGC
GGCTGGGTGTGTGAGCACCGCTGGCGCCAGATCTACAACATGGTGGCCTT
CCGAAACACCGTGGGCTTGGACGAGATCCAGAACTGGTGGGACAACGGCA
GCAACCAGATCTCCTTCAGCCGAGGCAGCCGCGGCTTCGTGGCCTTCAAC
AACGACAACTACGACCTGAACAGCTCCCTGCAGACGGGCCTGCCCGCCGG
CACCTACTGCGACGTCATTTCCGGCTCCAAGAGCGGCTCCTCCTGCACGG
GCAAGACCGTCACCGTCGGATCCGACGGACGGGCTTCCATCTACATTGGC
AGCTCCGAGGACGATGGAGTGCTGGCCATTCACGTCAACGCCAAGTTGGC
AAGCTTTCTAGACCAT
BO10724.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:37:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-p-RB | 1485 | CG18730-PB | 1..1482 | 17..1498 | 7410 | 100 | Plus |
| Amy-p-RA | 1485 | CG18730-PA | 1..1482 | 17..1498 | 7410 | 100 | Plus |
| Amy-d-RA | 1485 | CG17876-PA | 1..1482 | 17..1498 | 7155 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-p-RB | 1668 | CG18730-RB | 33..1515 | 16..1498 | 7415 | 100 | Plus |
| Amy-p-RA | 1595 | CG18730-RA | 33..1515 | 16..1498 | 7415 | 100 | Plus |
| Amy-d-RA | 1606 | CG17876-RA | 36..1518 | 16..1498 | 7160 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17118789..17120271 | 1498..16 | 7415 | 100 | Minus |
| 2R | 25286936 | 2R | 17124799..17126281 | 16..1498 | 7160 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:37:03 has no hits.
BO10724.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:49:07 Download gff for
BO10724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 1..1485 | 17..1502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:34 Download gff for
BO10724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 33..1518 | 16..1502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:33:34 Download gff for
BO10724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 40..1515 | 23..1500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:49:07 Download gff for
BO10724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 33..1518 | 16..1502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:04:39 Download gff for
BO10724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Amy-p-RA | 40..1515 | 23..1500 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:04:39 Download gff for
BO10724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17118787..17120264 | 23..1500 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:33:34 Download gff for
BO10724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13006292..13007769 | 23..1500 | 99 | | Minus |
BO10724.pep Sequence
Translation from 16 to 1516
> BO10724.pep
MFLAKSIVCLALLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAECENFL
GPNGYAGVQVSPVNENAVKDSRPWWERYQPISYKLETRSGNEEQFASMVK
RCNAVGVRTYVDVVFNHMAADGGTYGTGGSTASPSSKSYPGVPYSSLDFN
PTCAISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAG
FRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAI
SKSEYTGLGAITEFRHSDSIGKVFRGKDQLQYLTNWGTAWGFAASDRSLV
FVDNHDNQRGHGAGGADVLTYKVPKQYKMASAFMLAHPFGTPRVMSSFSF
TDTDQGPPTTDGHNIASPIFNSDNSCSGGWVCEHRWRQIYNMVAFRNTVG
LDEIQNWWDNGSNQISFSRGSRGFVAFNNDNYDLNSSLQTGLPAGTYCDV
ISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKLASFLDH
BO10724.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:31:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Amy-p-PB | 494 | CG18730-PB | 1..494 | 1..494 | 2644 | 100 | Plus |
| Amy-p-PA | 494 | CG18730-PA | 1..494 | 1..494 | 2644 | 100 | Plus |
| Amy-d-PA | 494 | CG17876-PA | 1..494 | 1..494 | 2631 | 99.4 | Plus |
| Amyrel-PA | 493 | CG8221-PA | 10..493 | 8..494 | 1582 | 60.5 | Plus |
