Clone BO10726 Report

Search the DGRC for BO10726

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:107
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG10841-RA
Protein status:BO10726.pep: validated full length
Sequenced Size:2218

Clone Sequence Records

BO10726.3prime Sequence

813 bp (812 high quality bases) assembled on 2006-04-19

> BO10726.3prime
ATGGTCTAGAAAGCTTGCATAGTTGCGCTTCATTTGACCGGTGGCAAAGA
GCACGTCGAGGATTTTCAGGAACTCCCGGTAGTTGAACTCCATGCACATG
CCCTTCTTCACGCCGAAGCACTTGCAGATCGCTTGGAACTCGCGGCTGCT
CAGCATTACATGCATGTCGCGCACCGTGATGCCGCGCAGGAATTGATTCT
GCGTGATCGAGCCGCACTGTTCGCGATCGAAGTCCTTGAACAGCTGACTC
AGATTGGAGATCTCGTCCGGTTTGCGGGCCAACTTCATCAGGGCCTGCGA
GCAGATGGTTCGCTCGTCGAAGCTCAGGAAGCAGTCGACGCAGTCCAGAT
TGGGCAAATGGAGCAGTGGCACGGCGGTCACCACCTGGTCACCCATGTTC
GTGTCCAGTTGGATGAAGATCTCGTCGAGGGCCTTGCAGAAATCGCGATA
GCGAATGCAGGACACGCGATTCGGTGAACGGAAGATGTTGCACAAGATGT
TAGCTTCCTCTTCCTTGATGATTACACTTGAGTTATCCAGGGCTCGCTTG
AAGTCCGATTCAAGGATCTCGCCCTCGCGATGGCGATCGTAGTCCTTCAT
GAACTCGATGACGGCCACGCTCTTGACCACAGCCTGTCGCTTGGCGTTCG
TAAGGATGCGCACGATCACCTCCTCGCTGACATCCTCGGGATCCAAATTG
TCTCTCGCAAACGGTGGACACTCCACCAGTTGCTGCTTGGTGACCAGCGC
TGGCATGGCATACTCCGCCGGATCGACGTCGTCAAAAACTTGGTGTAGCA
AAAGCCCAGCTCG

BO10726.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:09:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG10841-PA 2187 CG10841-RA 1420..2184 783..19 3825 100 Minus
CG10841-PA 2187 CG10841-RA 1389..1419 813..783 155 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10841-RB 2403 CG10841-RB 1506..2301 813..19 3955 99.9 Minus
CG10841-RA 2406 CG10841-RA 1509..2304 813..19 3955 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:23:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13634294..13634759 484..19 2330 100 Minus
3R 32079331 3R 13633903..13634232 813..485 1600 99.7 Minus
Blast to na_te.dros performed on 2015-02-10 17:23:36 has no hits.

BO10726.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:21 Download gff for BO10726.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-PA 1389..2187 18..813 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:03:44 Download gff for BO10726.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-PA 1389..2187 18..813 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:21:14 Download gff for BO10726.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 1509..2304 19..813 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:56:33 Download gff for BO10726.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 1509..2304 19..813 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:56:33 Download gff for BO10726.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 13633903..13634232 485..813 99 -> Minus
3R 13634294..13634759 19..484 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:21:14 Download gff for BO10726.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9459625..9459954 485..813 99 -> Minus
arm_3R 9460016..9460481 19..484 100   Minus

BO10726.5prime Sequence

854 bp (786 high quality bases) assembled on 2006-04-19

> BO10726.5prime
GAAGTTATCAGTCGACATGCATTCGACCAAGATTAAAGAGGGTGATGACA
GAGAGGAGATGGAGCTAAATCAAATCTGGCGAGGATGTCGTAAAATCCAG
GGCGCCATTTTTCGTTATAACTTTGACATCTGCGCCGACTTAAAGCAGCA
TGATCCCTGTTGCAGTGGCTTCGTGTCCGAGCCCATTTTCACCGCCGTGC
TGGGCAAGTATCGCAAGGTGGCCGGATTGTCCGAGTCGGAACTCCGGGAT
GTCACTGACTATTTCCAAATTCGAGATGGACGCGTAGCGTATCGTCAGTT
CTGCAAGGTCGTCTGCAGCGAAACACTGCATAAGACCGCCAAAAGTGATC
TAGCTACGGGACTGGAGTGGAACGATCCCTGGCATGTGAATGTTGTACCC
CAGCCGGAGGATCGACGACGTCTCTGCCTGATCCTGCTCAAGATTGCCCA
ACTATGCAATATTCCGCTCATGCCCTACTTTCAGGACTACGAACTAATTG
CACAAAATGTTGGAGTTGTTACCGTTGCGCACTTTTCTCGTGTGCTGCAC
TTTATGAAGATACCACTTTCGGAGTCCGATTTTCTGCTCCTCCTCAGACG
CTATATGAAGGATGGTTACCTGGTCAACTATGTGGCTTTCCTCAAGCACA
TCGATAATATTATAGCATACCTGGGCGAGCATCATCTGCTGGACAACTCA
CATGATATTATCAAGGACTTTCCGGGACGTTTAGTGGACCTAGAACTTTC
CCAACTGCCAGCTATTGATGGTTGCAAGGCAGTGCATCCAATCTTTCCCG
ATGCCTGCAGTACACCCAAAAAGAATCGAAATCAGTGCGACATTCTGTTC
TGCA

BO10726.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG10841-PA 2187 CG10841-RA 1..838 17..854 4190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10841-RA 2406 CG10841-RA 121..958 17..854 4190 100 Plus
CG10841-RB 2403 CG10841-RB 121..955 17..854 4135 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:41:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13632811..13633018 497..704 1040 100 Plus
3R 32079331 3R 13632578..13632750 324..496 865 100 Plus
3R 32079331 3R 13633079..13633229 704..854 755 100 Plus
3R 32079331 3R 13632374..13632518 179..323 725 100 Plus
3R 32079331 3R 13632175..13632301 53..179 635 100 Plus
3R 32079331 3R 13632062..13632098 17..53 185 100 Plus
Blast to na_te.dros performed on 2015-02-11 09:41:58 has no hits.

BO10726.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:22 Download gff for BO10726.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-PA 1..837 17..853 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:03:46 Download gff for BO10726.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-PA 1..837 17..853 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:53:15 Download gff for BO10726.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 121..957 17..853 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:53:02 Download gff for BO10726.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 121..957 17..853 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:53:02 Download gff for BO10726.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13632062..13632097 17..52 100 -> Plus
3R 13632175..13632301 53..179 100 -> Plus
3R 13632375..13632518 180..323 100 -> Plus
3R 13632578..13632750 324..496 100 -> Plus
3R 13632811..13633017 497..703 100 -> Plus
3R 13633079..13633228 704..853 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:53:15 Download gff for BO10726.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9457784..9457819 17..52 100 -> Plus
arm_3R 9457897..9458023 53..179 100 -> Plus
arm_3R 9458097..9458240 180..323 100 -> Plus
arm_3R 9458300..9458472 324..496 100 -> Plus
arm_3R 9458533..9458739 497..703 100 -> Plus
arm_3R 9458801..9458950 704..853 100   Plus

BO10726.complete Sequence

2218 bp (2218 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631857

> BO10726.complete
GAAGTTATCAGTCGACATGCATTCGACCAAGATTAAAGAGGGTGATGACA
GAGAGGAGATGGAGCTAAATCAAATCTGGCGAGGATGTCGTAAAATCCAG
GGCGCCATTTTTCGTTATAACTTTGACATCTGCGCCGACTTAAAGCAGCA
TGATCCCTGTTGCAGTGGCTTCGTGTCCGAGCCCATTTTCACCGCCGTGC
TGGGCAAGTATCGCAAGGTGGCCGGATTGTCCGAGTCGGAACTCCGGGAT
GTCACTGACTATTTCCAAATTCGAGATGGACGCGTAGCGTATCGTCAGTT
CTGCAAGGTCGTCTGCAGCGAAACACTGCATAAGACCGCCAAAAGTGATC
TAGCTACGGGACTGGAGTGGAACGATCCCTGGCATGTGAATGTTGTACCC
CAGCCGGAGGATCGACGACGTCTCTGCCTGATCCTGCTCAAGATTGCCCA
ACTATGCAATATTCCGCTCATGCCCTACTTTCAGGACTACGAACTAATTG
CACAAAATGTTGGAGTTGTTACCGTTGCGCACTTTTCTCGTGTGCTGCAC
TTTATGAAGATACCACTTTCGGAGTCCGATTTTCTGCTCCTCCTCAGACG
CTATATGAAGGATGGTTACCTGGTCAACTATGTGGCTTTCCTCAAGCACA
TCGATAATATTATAGCATACCTGGGCGAGCATCATCTGCTGGACAACTCA
CATGATATTATCAAGGACTTTCCGGGACGTTTAGTGGACCTAGAACTTTC
CCAACTGCCAGCTATTGATGGTTGCAAGGCAGTGCATCCAATCTTTCCCG
ATGCCTGCAGTACACCCAAAAAGAATCGAAATCAGTGCGACATTCTGTTC
TGCATTCAGAACTACATCTACAAGAACCAAGTGCGCACCTCCGAGTTCCT
AGAGTGCTATGACAGCCTAAACGTGGGCAGCATCACCAAGAATCAATTTG
AGCGCGGTCTATCGAACATGGGAGTGGGAAAATATCTGACCCAAAGGGAA
ATGTCCATTCTGCTGGAACGCTACACTGATCCCGTGGATATCAATCGAGT
GCGTTGGCGCAATTTCGCTGATGAGATCGATACAGTATTCACCATTAAGA
ACCTGGAGAAGATGCCACAGTGTGTCGTGGAATCGCCACTTCGTCACATC
CAGGAGTTGCCCAGACCCGGCGCCGTGCCCTGGGAGTCTGTGTCGGCTAA
TGTTCGTGATCTGTGTGAGGATGCCATGGCCAAGATTAAGATACGCATCC
GCAATCGTCGCCTCTATCTGCATCCATTCTTCCGAAGCTACGATAAACTC
AACAGTGGACATGTGCGTTGCAACATTACCAAGCAGATTTTTCGCACCAA
TGGCATCCTTCTGTCCGATCCGGAGCAGGACTCTGTGCTGAGTCGGTATG
GAAACGAGCTGGGCTTTTGCTACACCAAGTTTTTGGACGACGTCGATCCG
GCGGAGTATGCCATGCCAGCGCTGGTCACCAAGCAGCAACTGGTGGAGTG
TCCACCGTTTGCGAGAGACAATTTGGATCCCGAGGATGTCAGCGAGGAGG
TGATCGTGCGCATCCTTACGAACGCCAAGCGACAGGCTGTGGTCAAGAGC
GTGGCCGTCATCGAGTTCATGAAGGACTACGATCGCCATCGCGAGGGCGA
GATCCTTGAATCGGACTTCAAGCGAGCCCTGGATAACTCAAGTGTAATCA
TCAAGGAAGAGGAAGCTAACATCTTGTGCAACATCTTCCGTTCACCGAAT
CGCGTGTCCTGCATTCGCTATCGCGATTTCTGCAAGGCCCTCGACGAGAT
CTTCATCCAACTGGACACGAACATGGGTGACCAGGTGGTGACCGCCGTGC
CACTGCTCCATTTGCCCAATCTGGACTGCGTCGACTGCTTCCTGAGCTTC
GACGAGCGAACCATCTGCTCGCAGGCCCTGATGAAGTTGGCCCGCAAACC
GGACGAGATCTCCAATCTGAGTCAGCTGTTCAAGGACTTCGATCGCGAAC
AGTGCGGCTCGATCACGCAGAATCAATTCCTGCGCGGCATCACGGTGCGC
GACATGCATGTAATGCTGAGCAGCCGCGAGTTCCAAGCGATCTGCAAGTG
CTTCGGCGTGAAGAAGGGCATGTGCATGGAGTTCAACTACCGGGAGTTCC
TGAAAATCCTCGACGTGCTCTTTGCCACCGGTCAAATGAAGCGCAACTAT
GCAAGCTTTCTAGACCAT

BO10726.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG10841-RA 2187 CG10841-PA 1..2184 17..2200 10920 100 Plus
CG10841-RB 2184 CG10841-PB 1..2181 17..2200 10840 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:35:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG10841-RA 2406 CG10841-RA 121..2304 17..2200 10920 100 Plus
CG10841-RB 2403 CG10841-RB 121..2301 17..2200 10840 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:35:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13634294..13634759 1735..2200 2330 100 Plus
3R 32079331 3R 13633795..13634232 1297..1734 2190 100 Plus
3R 32079331 3R 13633079..13633460 704..1085 1910 100 Plus
3R 32079331 3R 13633523..13633735 1084..1296 1065 100 Plus
3R 32079331 3R 13632811..13633018 497..704 1040 100 Plus
3R 32079331 3R 13632578..13632750 324..496 865 100 Plus
3R 32079331 3R 13632374..13632518 179..323 725 100 Plus
3R 32079331 3R 13632175..13632301 53..179 635 100 Plus
3R 32079331 3R 13632062..13632098 17..53 185 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:35:30 has no hits.

BO10726.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:55 Download gff for BO10726.complete
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 1..2187 17..2201 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:14:10 Download gff for BO10726.complete
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 121..2304 17..2200 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:47:12 Download gff for BO10726.complete
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 121..2304 17..2202 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:55 Download gff for BO10726.complete
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 121..2304 17..2200 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:14:49 Download gff for BO10726.complete
Subject Subject Range Query Range Percent Splice Strand
CG10841-RA 121..2304 17..2202 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:14:49 Download gff for BO10726.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13633525..13633735 1086..1296 100 -> Plus
3R 13633795..13634232 1297..1734 100 -> Plus
3R 13632062..13632097 17..52 100 -> Plus
3R 13632175..13632301 53..179 100 -> Plus
3R 13632375..13632518 180..323 100 -> Plus
3R 13632578..13632750 324..496 100 -> Plus
3R 13632811..13633017 497..703 100 -> Plus
3R 13633079..13633460 704..1085 100 -> Plus
3R 13634294..13634759 1735..2202 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:47:12 Download gff for BO10726.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9458300..9458472 324..496 100 -> Plus
arm_3R 9458533..9458739 497..703 100 -> Plus
arm_3R 9457784..9457819 17..52 100 -> Plus
arm_3R 9457897..9458023 53..179 100 -> Plus
arm_3R 9458097..9458240 180..323 100 -> Plus
arm_3R 9458801..9459182 704..1085 100 -> Plus
arm_3R 9459247..9459457 1086..1296 100 -> Plus
arm_3R 9459517..9459954 1297..1734 100 -> Plus
arm_3R 9460016..9460481 1735..2202 99   Plus

BO10726.pep Sequence

Translation from 16 to 2218

> BO10726.pep
MHSTKIKEGDDREEMELNQIWRGCRKIQGAIFRYNFDICADLKQHDPCCS
GFVSEPIFTAVLGKYRKVAGLSESELRDVTDYFQIRDGRVAYRQFCKVVC
SETLHKTAKSDLATGLEWNDPWHVNVVPQPEDRRRLCLILLKIAQLCNIP
LMPYFQDYELIAQNVGVVTVAHFSRVLHFMKIPLSESDFLLLLRRYMKDG
YLVNYVAFLKHIDNIIAYLGEHHLLDNSHDIIKDFPGRLVDLELSQLPAI
DGCKAVHPIFPDACSTPKKNRNQCDILFCIQNYIYKNQVRTSEFLECYDS
LNVGSITKNQFERGLSNMGVGKYLTQREMSILLERYTDPVDINRVRWRNF
ADEIDTVFTIKNLEKMPQCVVESPLRHIQELPRPGAVPWESVSANVRDLC
EDAMAKIKIRIRNRRLYLHPFFRSYDKLNSGHVRCNITKQIFRTNGILLS
DPEQDSVLSRYGNELGFCYTKFLDDVDPAEYAMPALVTKQQLVECPPFAR
DNLDPEDVSEEVIVRILTNAKRQAVVKSVAVIEFMKDYDRHREGEILESD
FKRALDNSSVIIKEEEANILCNIFRSPNRVSCIRYRDFCKALDEIFIQLD
TNMGDQVVTAVPLLHLPNLDCVDCFLSFDERTICSQALMKLARKPDEISN
LSQLFKDFDREQCGSITQNQFLRGITVRDMHVMLSSREFQAICKCFGVKK
GMCMEFNYREFLKILDVLFATGQMKRNYASFLDH

BO10726.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG10841-PA 728 CG10841-PA 1..728 1..728 3850 100 Plus
CG10841-PB 727 CG10841-PB 1..727 1..728 3833 99.9 Plus