Clone BO10737 Report

Search the DGRC for BO10737

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:107
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG31150-RA
Protein status:BO10737.pep: Imported from assembly
Sequenced Size:4444

Clone Sequence Records

BO10737.3prime Sequence

844 bp (813 high quality bases) assembled on 2006-04-19

> BO10737.3prime
ATGGTCTAGAAAGCTTGCTGCAACTACAACTACATCGGAGGAATTCTGCA
GCGGCACAGGAGTTGGAGTGTTTGCCTCCAGCTCGCAGATCGTATAATTC
TGCATGCGGTTTAGGGGCTTGCTGCACAGCCCACACATCTGGTGCTTATA
CACGCCGTATATCTCGAAATTCAGGATGTTGTACAGATCGAACTGGATGG
TGGAGGACAGCTGCGTACACTCCACAATTAAAATATTTTGCTCGTTAAGT
TCCACGCGGAAGTCGTAGTCACTAGTCTCAATTGGCCATTGATATGGCTT
TTTGCGCACGTTGTGCGGTGTTTGATCCTGGTTAAGATATATGAGCACTG
GTTCATCCGTGGGCAGGCTGCTGTTGTCTGTGCGGGCGCGGAAGTTGAAG
TAGTTTTGCCCGATATGGACTCGTAATCCATAGTTGGTGGACAGTCCTTG
AACAGGCGAAGGCGTAACAAACACTGCAATCTGTGGCAATGGCGAACAGT
CAGCCACCAGCAGCGTGAGACAGTCGGGACGCACCGCAATCTCTCTGAGA
TTGATTAGGTAATCATCGAAGGTATTGACTATGCCATTGATTACTGAGCA
GGAGCGCTTAAGTCCTGAGTCGAAGGTAAGCTCGTGGGAAGCGTCGAACT
TCGAGTCCAGCTTGTAGAAGAAGGGGATCTGATGGAAACGCCACTTCACT
CCGTTGACCTCCACAGCCAGCCTGAACTGGTCCTGAGGAGTTTGCATTGA
TATATTTATCTCCTGGCTCATATGCAGACTGTCCACCTTGTCGGCGGATA
AGGCGGACACTAAGTGGTCCAGTCGATTCGACCACAGCTCGAAC

BO10737.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:09:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31150-PA 4413 CG31150-RA 3585..4410 844..19 4130 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:14:11
Subject Length Description Subject Range Query Range Score Percent Strand
cv-d-RA 4744 CG31150-RA 3858..4683 844..19 4130 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:14:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15844822..15845409 257..844 2940 100 Plus
3R 32079331 3R 15844527..15844769 19..261 1200 99.6 Plus
Blast to na_te.dros performed on 2015-02-12 00:14:07 has no hits.

BO10737.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:45 Download gff for BO10737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31150-PA 3585..4413 15..844 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:04:11 Download gff for BO10737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31150-PA 3585..4413 15..844 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 15:51:06 Download gff for BO10737.3prime
Subject Subject Range Query Range Percent Splice Strand
cv-d-RA 3856..4684 15..844 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:02:10 Download gff for BO10737.3prime
Subject Subject Range Query Range Percent Splice Strand
cv-d-RA 3858..4686 15..844 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:02:10 Download gff for BO10737.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15844523..15844764 15..256 99 <- Plus
3R 15844822..15845409 257..844 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 15:51:06 Download gff for BO10737.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11670245..11670486 15..256 99 <- Plus
arm_3R 11670544..11671131 257..844 100   Plus

BO10737.complete Sequence

4444 bp assembled on 2008-11-10

GenBank Submission: KX797672

> BO10737.complete
GAAGTTATCAGTCGACATGAGGCTACTCAAGTGTTCCGTGTTTGTGTATC
TGTTCCTGATCTTCGATGCCGGCCATGCCTTCAGCATCATTGGCCTCAAC
AAACAGATGCTCTACGAGTACGAGGGCAATGTCCTGGTGGGTGCAAAGCC
CCAGGACGAGGGCCACCAGGCGCCACCCACCACCGGATGGATTGTGCGGG
GCAAGCTGACGCTCCAGCGGCAAAGCGAGCTGGTCTTGGCTGCGGCGCTG
GTCATAGACGATGTAACGCTGAACAACTCCGGCGAGAAGTTCCTGCAGAA
CAAGGAGATGTACCCGCCCTACAAGCCCTTCAAGATCGCTCTCACCAAGG
ATGGCGCCATCTCACATGTGGTCTTCAAGGAAGGCGATCCCATATGGAGC
ATGAACTTCAAGCGGGCCATCGCATCGGTGCTGCAGTTCCAGATGAAGTC
CAGCGGGGCCTTCGTCGTGGATGAGCTGGGTATTCACGGCACTTGCCGCA
CGGAGTACTTTGTGTCCAACAGGACAAACTACATCTCCATCCGCAAAACG
CCGGAGGTCAAGACCTGCAAGCCGTACTCGGAGGCGGTTCACACTACACG
CAGCAACGTGCCGCCCAATACGTGCGAATTCGATCACCAGAAGAGTGTGA
TCATTGGCAATGAGGCCATCTACGGGATGTCACCGCACAACGAAACGGGT
TACTATCTGAGCATGGCCCATGCCAAGGGCACAACCCTGATCCACACGTT
CGAATCCACGGGAGAAGCACAATTCATTAACTCGGAGTTGCTGCTCAATT
TCCTTAACGAGACGCCCATCGACAATCCCATCGATATTGAAACCTCAATG
GCAGCAGAGCCATCCAACCTGGAGCTGCAGCGGCTGGATCCCAACGATCC
CACTGGAGGTCGTAGCCCTCAGCAGCAGGAGACGCTGATTGCCCAGGCGG
GGACGCTCTTAGACAGTCTGGCCGAAGCACTAGAGACAACGGAATTCAAG
TTCTCGGAGCCCTACGACTCCACTCTCTCCGACGTGATCAAGCTTCTCAG
CGAGATGGACTTTGATTCGCTCACTAAACTCTATCGGGAGGTGGACATTG
GCACCTCCTATCGCCAGGAGACCATTCGCAACATCTTTCATGAAATCATT
CCCCGCATTGGAACTAAAGCATCCGTTTTTCTGACCCACCACCTGGTGCT
CAACAAATTGACTAAGCCGCAAATCGCTGTGCAACTGCTCATACCCATGC
CATTCCACATCTTCGAGCTCTCGGCGGAGTTGGTGCAAAAGTGCGAGGAC
TTCCTCAATATCGGACCCGATCGCCCGGATGTGCGGCAGGCCGCTATCCT
TAGCTTTGCCACGCTCATCCATAATGTCTATGTGGCCAAGGGCATCGATA
AGGAAAAGTTTGAGGAGTATGTCCAGAAGTACTTTAATGCCTATCTAAGC
GATCGCGACTTCGACCAGAAGATGTTGTATCTGCAGGGTCTAAACAACTT
GCAATTGGGGAACGTGGCCAACTATCTGGAGCCCATTGTTCAGGACCCCA
ACGAGCACGAGGATCTGAAGTTCCAGGCCGCCTGGACGACCCTGGCACTG
GCCGATCGTCGAGCGGAGCGCATATACGAGGTCTACTGGCCAATCTTTGA
GTCCCGAAATGCCAGCCTAGAACTTCGTGTGGCAGCGGTTACGCTGCTAT
TGATTTCCAACCCCACGGCCGCCCGTCTCATCAGCATCCATCGCATCATT
CAGAGCGAGACGGACCCTCACATGATTAACTACTACCGGACGACGGTGAC
GAGCATCTCGGAGACAACATATCCCTGCTATCAGCACCTACGCCGTCTGT
TGTCCTACATGCATCGTCATCTGCCCCAGAAGCCCGAGTCACGCTACTGG
GTCACCGGTAACTACATCTTTGACTATCGCGACTCCAAGTTCGGCATCGG
TGCAATGCTTCAGGTATTCCTCGTGGGCGATCCAAAGTCGGACATGCCAG
TGGTGGCCTTCTTCAAATTCGACACCGAAGCTCTAGGCAAATTCACAGGA
CAACTGGCGCTATACATCAAGGCACGTGGGCTGCCAGATACCATCCTGAA
CAAGATGCAATCGCGAAATGGCAGCGATCCTTTTACCTTTAAGAGCATCA
AGGCTCTATTGGCCATGCTGCAGGCTCCGATCATCAACTCGAAGGACCTG
CATCTGGAGTTCATCCTGCAAATGGAGGGCAAGACGGTGCTGTCGTACTA
CCTCAACCAGCGGATGTTCCGGCAGCTGACCTACGACAACATTCTGGAAA
GAATGCAGCAAATCATTCGGACAGACAGTCACATAAACATGCAGACTGTT
CGTTGGCCTTTCATGAATCGCTACACGGTGCCCACGGTGCTGGGAACCTC
CTCCGACGTCCTGCTGCAGACCACCGTACTAACCTCGTTGCGTGGTAATA
TAACAGAGCAGCGGAACTCGCCCATAACCAAGCACACGCTGGAAATCGAT
GCCCGATACTCTTCATACGCCTCGGTGCGGAGTCGTAGCTACAATCCGTT
CCTCAACCTCGATCACGAGATCAACCGGGAGCAGGGCTTCCTCATCTACA
TCCCCTTTAGCAGCGAACTGCATCTGAACGAGAGTGGCAGTAAGTGCAGG
CGCTACTCCTTCTCCCGACCCCAAAACCTGACCAGTGGCCTGTCCTTCAA
GTCGCGGGCGGTGACCAAGACCAGGGGTTTGATCACGAAGACAGCGGCGG
CGCCCTTCGAAGAGATCATGGTGCCCGAGGGTCGGAACGATGTGGTTCAA
CTATTTAGCTACCCAATGACGGATTTGGGCGTCCGACTGAGCATGACCAC
CAATCTCAACGAGCTCATCAAGTACAGGGGGATGCTGCTAAAGTCCGAGT
TCACGGAGAATGGGTTCTCCGGCAATATGGTGGTCAATGCTTTGATGTAC
ATATTTGGCTTCACCCAGCTAAGTTCCATACACCTGGGCCACGATCGCAA
CTTTACCATGCTTATGTACAACGAGAAGAACACCAGGATCGAAGGTAACT
TTTGTGCCGAAGACGTTTTGAAAACGTCGGACATGAAAGGCAAGCAGATC
GGCCTTACATTGGAGCACACGGACCACATGAACGAAAATCATGCTGCGGA
TGCACTTCATAGATGGAACATTACCCTGGACGTGCTGGCATCGACCAAGT
CCAATTGGTTCAAGCTGACCGGCCAGGTTCAGCGAAATTCAAAGGATGAC
GAGGACGACTGGAAGGCCTGCACCAAGTTGACCTATGAACCGCTGGTGTT
TACCAAGCGACCTCACACTCTGAATGGCGATGTGGTGTTTGGCCTGGCCA
CCGAGGAGAGCGAGTGCCCGGAGAAGGGTTCCACGGTGCAGTTTGCAGCT
AGAGCTGGTCCCTCGGAGCATGCCCGTGCCTTCCTCCGCTCCGACAAGAT
CTCGCTGACGGACACCGACTTCTGTCCCAAGGAGGTACTGAAGTTCTCGC
CCATACCCACTTCCAGGTATTGCAAGCGTAGCAACTTTGAGAACTTCACC
TCGATCACACAATACGACATGGACCTGAAGTTTGACAATATGCCCGCCTG
GTTCGAGCTGTGGTCGAATCGACTGGACCACTTAGTGTCCGCCTTATCCG
CCGACAAGGTGGACAGTCTGCATATGAGCCAGGAGATAAATATATCAATG
CAAACTCCTCAGGACCAGTTCAGGCTGGCTGTGGAGGTCAACGGAGTGAA
GTGGCGTTTCCATCAGATCCCCTTCTTCTACAAGCTGGACTCGAAGTTCG
ACGCTTCCCACGAGCTTACCTTCGACTCAGGACTTAAGCGCTCCTGCTCA
GTAATCAATGGCATAGTCAATACCTTCGATGATTACCTAATCAATCTCAG
AGAGATTGCGGTGCGTCCCGACTGTCTCACGCTGCTGGTGGCTGACTGTT
CGCCATTGCCACAGATTGCAGTGTTTGTTACGCCTTCGCCTGTTCAAGGA
CTGTCCACCAACTATGGATTACGAGTCCATATCGGGCAAAACTACTTCAA
CTTCCGCGCCCGCACAGACAACAGCAGCCTGCCCACGGATGAACCAGTGC
TCATATATCTTAACCAGGATCAAACACCGCACAACGTGCGCAAAAAGCCA
TATCAATGGCCAATTGAGACTAGTGACTACGACTTCCGCGTGGAACTTAA
CGAGCAAAATATTTTAATTGTGGAGTGTACGCAGCTGTCCTCCACCATCC
AGTTCGATCTGTACAACATCCTGAATTTCGAGATATACGGCGTGTATAAG
CACCAGATGTGTGGGCTGTGCAGCAAGCCCCTAAACCGCATGCAGAATTA
TACGATCTGCGAGCTGGAGGCAAACACTCCAACTCCTGTGCCGCTGCAGA
ATTCCTCCGATGTAGTTGTAGTTGCAGCAAGCTTTCTAGACCAT

BO10737.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
cv-d-RA 4413 CG31150-PA 1..4410 17..4426 22050 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
cv-d-RA 4744 CG31150-RA 273..4683 16..4426 22055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15850715..15851690 1449..474 4880 100 Minus
3R 32079331 3R 15844822..15845420 4188..3590 2995 100 Minus
3R 32079331 3R 15849137..15849641 2796..2292 2525 100 Minus
3R 32079331 3R 15850271..15850661 1839..1449 1955 100 Minus
3R 32079331 3R 15844527..15844769 4426..4184 1200 99.6 Minus
3R 32079331 3R 15849700..15849932 2291..2059 1165 100 Minus
3R 32079331 3R 15848431..15848660 3266..3037 1150 100 Minus
3R 32079331 3R 15851750..15851978 475..247 1145 100 Minus
3R 32079331 3R 15849989..15850208 2059..1840 1100 100 Minus
3R 32079331 3R 15852728..15852927 247..48 1000 100 Minus
3R 32079331 3R 15845505..15845684 3589..3410 900 100 Minus
3R 32079331 3R 15845744..15845889 3409..3264 730 100 Minus
3R 32079331 3R 15848718..15848844 3037..2911 635 100 Minus
3R 32079331 3R 15848900..15849016 2910..2794 585 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:25:11 has no hits.

BO10737.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:49:58 Download gff for BO10737.complete
Subject Subject Range Query Range Percent Splice Strand
CG31150-RA 260..4684 2..4430 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:31:06 Download gff for BO10737.complete
Subject Subject Range Query Range Percent Splice Strand
cv-d-RA 272..4681 17..4428 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:10:22 Download gff for BO10737.complete
Subject Subject Range Query Range Percent Splice Strand
CG31150-RA 272..4681 17..4428 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:18:14 Download gff for BO10737.complete
Subject Subject Range Query Range Percent Splice Strand
cv-d-RA 274..4683 17..4428 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:18:14 Download gff for BO10737.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15845505..15845684 3410..3589 100 <- Minus
3R 15845744..15845887 3266..3409 100 <- Minus
3R 15848432..15848659 3038..3265 100 <- Minus
3R 15848718..15848844 2911..3037 100 <- Minus
3R 15848900..15849015 2795..2910 100 <- Minus
3R 15844525..15844764 4189..4428 99 <- Minus
3R 15844822..15845420 3590..4188 100 <- Minus
3R 15849139..15849641 2292..2794 100 <- Minus
3R 15849700..15849931 2060..2291 100 <- Minus
3R 15849989..15850208 1840..2059 100 <- Minus
3R 15850271..15850661 1449..1839 100 <- Minus
3R 15850716..15851688 476..1448 100 <- Minus
3R 15851750..15851977 248..475 100 <- Minus
3R 15852728..15852927 48..247 100 <- Minus
3R 15853278..15853308 17..47 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:31:06 Download gff for BO10737.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11670247..11670486 4189..4428 99 <- Minus
arm_3R 11670544..11671142 3590..4188 100 <- Minus
arm_3R 11671227..11671406 3410..3589 100 <- Minus
arm_3R 11671466..11671609 3266..3409 100 <- Minus
arm_3R 11674154..11674381 3038..3265 100 <- Minus
arm_3R 11674440..11674566 2911..3037 100 <- Minus
arm_3R 11674622..11674737 2795..2910 100 <- Minus
arm_3R 11674861..11675363 2292..2794 100 <- Minus
arm_3R 11675422..11675653 2060..2291 100 <- Minus
arm_3R 11675711..11675930 1840..2059 100 <- Minus
arm_3R 11675993..11676383 1449..1839 100 <- Minus
arm_3R 11676438..11677410 476..1448 100 <- Minus
arm_3R 11677472..11677699 248..475 100 <- Minus
arm_3R 11678450..11678649 48..247 100 <- Minus
arm_3R 11679000..11679030 17..47 100   Minus

BO10737.pep Sequence

Translation from 16 to 4444

> BO10737.pep
MRLLKCSVFVYLFLIFDAGHAFSIIGLNKQMLYEYEGNVLVGAKPQDEGH
QAPPTTGWIVRGKLTLQRQSELVLAAALVIDDVTLNNSGEKFLQNKEMYP
PYKPFKIALTKDGAISHVVFKEGDPIWSMNFKRAIASVLQFQMKSSGAFV
VDELGIHGTCRTEYFVSNRTNYISIRKTPEVKTCKPYSEAVHTTRSNVPP
NTCEFDHQKSVIIGNEAIYGMSPHNETGYYLSMAHAKGTTLIHTFESTGE
AQFINSELLLNFLNETPIDNPIDIETSMAAEPSNLELQRLDPNDPTGGRS
PQQQETLIAQAGTLLDSLAEALETTEFKFSEPYDSTLSDVIKLLSEMDFD
SLTKLYREVDIGTSYRQETIRNIFHEIIPRIGTKASVFLTHHLVLNKLTK
PQIAVQLLIPMPFHIFELSAELVQKCEDFLNIGPDRPDVRQAAILSFATL
IHNVYVAKGIDKEKFEEYVQKYFNAYLSDRDFDQKMLYLQGLNNLQLGNV
ANYLEPIVQDPNEHEDLKFQAAWTTLALADRRAERIYEVYWPIFESRNAS
LELRVAAVTLLLISNPTAARLISIHRIIQSETDPHMINYYRTTVTSISET
TYPCYQHLRRLLSYMHRHLPQKPESRYWVTGNYIFDYRDSKFGIGAMLQV
FLVGDPKSDMPVVAFFKFDTEALGKFTGQLALYIKARGLPDTILNKMQSR
NGSDPFTFKSIKALLAMLQAPIINSKDLHLEFILQMEGKTVLSYYLNQRM
FRQLTYDNILERMQQIIRTDSHINMQTVRWPFMNRYTVPTVLGTSSDVLL
QTTVLTSLRGNITEQRNSPITKHTLEIDARYSSYASVRSRSYNPFLNLDH
EINREQGFLIYIPFSSELHLNESGSKCRRYSFSRPQNLTSGLSFKSRAVT
KTRGLITKTAAAPFEEIMVPEGRNDVVQLFSYPMTDLGVRLSMTTNLNEL
IKYRGMLLKSEFTENGFSGNMVVNALMYIFGFTQLSSIHLGHDRNFTMLM
YNEKNTRIEGNFCAEDVLKTSDMKGKQIGLTLEHTDHMNENHAADALHRW
NITLDVLASTKSNWFKLTGQVQRNSKDDEDDWKACTKLTYEPLVFTKRPH
TLNGDVVFGLATEESECPEKGSTVQFAARAGPSEHARAFLRSDKISLTDT
DFCPKEVLKFSPIPTSRYCKRSNFENFTSITQYDMDLKFDNMPAWFELWS
NRLDHLVSALSADKVDSLHMSQEINISMQTPQDQFRLAVEVNGVKWRFHQ
IPFFYKLDSKFDASHELTFDSGLKRSCSVINGIVNTFDDYLINLREIAVR
PDCLTLLVADCSPLPQIAVFVTPSPVQGLSTNYGLRVHIGQNYFNFRART
DNSSLPTDEPVLIYLNQDQTPHNVRKKPYQWPIETSDYDFRVELNEQNIL
IVECTQLSSTIQFDLYNILNFEIYGVYKHQMCGLCSKPLNRMQNYTICEL
EANTPTPVPLQNSSDVVVVAASFLDH

BO10737.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
cv-d-PA 1470 CG31150-PA 1..1470 1..1470 7673 100 Plus