Clone Sequence Records
BO10746.3prime Sequence
836 bp (794 high quality bases) assembled on 2006-04-19
> BO10746.3prime
ATGGTCTAGAAAGCTTGCGTTCTTGCTACGCCTCATCAGCATGCGCTCCT
TCAGCGAAATCCGTCCGGACTTCTCCACCTTGGTGGATACGTTGCGACGC
GATTCGATTTGGGCCTGCTTCGATTTCTTCATTAATTCATTCAGGAGACT
GGTGATCTCCTTCTTCCAAATGTCCTTGAAATCATTGGTGAAATTCGTCC
AGTACTCGAAGAACTGGTCGGGCGTGCACTGGGCCAACGTTAGGGTGCAG
GCTTTGGGTGAGAAGTGGTAGAAGCGCATGGTCTCCAAAAAGAGATCGCG
ACACTCGTCAAGGGATTGATGCAGCTTGGCCATCGATTTGTCCGCCCCCT
CCACAAACTCCTCCATTTTGGACTTGAAGGGCTCCATGATCTCGGGACGC
GAGGCGGCCAAAACTTTGGCCGTCGTTCTCTTGCAACCCAAGAACTTCTT
GTTGAGATCGAAGATCTGCTGCTGCACCTCCTCGAAGTCCATTTGTGCGG
CTCTCTCCACATCGGCTGGCTCTGGGATGGGCAAGCGGATCTCCAGGGGA
TGCACTCCCTCCTTTCGCCGCTGCGCAATGTAGGTGCGCACAATGAAATG
GAGCAAGGTGGTGTGCGATTCCTTGGACTTGACATCCTTAAGCTTGCCCA
GAATATCCAGATTGAAGCCATCCGCTTGTCCGCGCTGCCGGTTGCCACCG
TTCATATAGTTGCCCAGCGTAAGGATGATGGAGAAGACCAGCTTCAAATC
CTCGCTCTCGATCAATTGCTGCGATAGCTGGGACACCGTTTCCAGCTTTC
GAACAACAGCGTTACGGACTCCTCGAATTCCGCCTG
BO10746.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:09:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3399-PC | 3465 | capu-RC | 2678..3462 | 803..19 | 3925 | 100 | Minus |
| CG3399-PD | 3624 | capu-RD | 2837..3621 | 803..19 | 3925 | 100 | Minus |
| CG3399-PB | 3150 | capu-RB | 2363..3147 | 803..19 | 3925 | 100 | Minus |
| CG3399-PA | 3180 | capu-RA | 2393..3177 | 803..19 | 3925 | 100 | Minus |
| CG3399-PC | 3465 | capu-RC | 2644..2678 | 836..802 | 175 | 100 | Minus |
| CG3399-PD | 3624 | capu-RD | 2803..2837 | 836..802 | 175 | 100 | Minus |
| CG3399-PB | 3150 | capu-RB | 2329..2363 | 836..802 | 175 | 100 | Minus |
| CG3399-PA | 3180 | capu-RA | 2359..2393 | 836..802 | 175 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:59:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| capu-RJ | 3721 | CG3399-RJ | 2730..3548 | 836..19 | 4070 | 99.9 | Minus |
| capu-RI | 4286 | CG3399-RI | 3295..4113 | 836..19 | 4070 | 99.9 | Minus |
| capu-RH | 3713 | CG3399-RH | 2722..3540 | 836..19 | 4070 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:59:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3873383..3873784 | 436..836 | 1960 | 99.8 | Plus |
| 2L | 23513712 | 2L | 3873019..3873323 | 134..438 | 1525 | 100 | Plus |
| 2L | 23513712 | 2L | 3872833..3872947 | 19..133 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 19:59:46 has no hits.
BO10746.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:47:59 Download gff for
BO10746.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-PD | 2803..3624 | 18..836 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:04:33 Download gff for
BO10746.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3399-PB | 2329..3150 | 18..836 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:39:47 Download gff for
BO10746.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RH | 2722..3545 | 11..836 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:42:05 Download gff for
BO10746.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RH | 2722..3545 | 11..836 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:42:05 Download gff for
BO10746.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3872828..3872947 | 11..133 | 96 | <- | Plus |
| 2L | 3873019..3873322 | 134..437 | 100 | <- | Plus |
| 2L | 3873385..3873784 | 438..836 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:39:47 Download gff for
BO10746.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3872828..3872947 | 11..133 | 96 | <- | Plus |
| arm_2L | 3873019..3873322 | 134..437 | 100 | <- | Plus |
| arm_2L | 3873385..3873784 | 438..836 | 99 | | Plus |
BO10746.5prime Sequence
939 bp (843 high quality bases) assembled on 2006-04-19
> BO10746.5prime
GAAGTTATCAGTCGACATGCGAGAGAAGGAAAGGGTTCAGAACACGCCCC
CACTAACCAAGCAGCCGCGAAAGAGACGAATAGCCCCACAACCTCCACCG
AAACCCCCACCAAAACCGAGAAAAATTCGTACTGAGAAAACCACCAACGA
TGACCACTGTGCGTTCATTGAGCAGCTCTTTTTCGAAACAACTGAGGCAA
AACCATCGGCTACAGTGGTTGCGGGAGTCACAGGACCTGCAGGACCTTTG
GGGGCTACAACATCCTCGCCGTCGCTGGAAACGCAATCAACTGTTATAAT
TTCGTTTAAATCATCTCAAACACCTGTGCAGTCTCAAACGAATTCTGCAG
CCTCCGAAAATGTTGAGGATGACACAGCGCCCCTGCCACTTCCACCGCCG
CCCCCCGGCTTCGGTACGCCCACCACGCCCCTTTTGTCAAGCAATGTGCT
GAAGAAGGTCGCCAGCTTCACGGTCGAGAAGTCTTCGGCGGGCAATAATA
GCTCGAATCCTCCGAATTTGTGCCCCACCAGTGACGAGACCACCCTCTTG
GCCACACCATGTTCTTCATCGCTGACGGTGGCAACCCTGCCGCCCGAAAT
CGCCGTGGGCGCAGCGGCGGGGGGCGTGGCCGGGGGTGCTGGTTCGCGAC
GCGGCTCATCTTATGTACCGGAAAAGTTAAGCTTCGCTGCATATGAAAAG
TTCGAAGGTCAAATGCTAATAAAATGGCTAATCTCAACGATGCAAAGCAA
TCCGAAGAGTTCCAGCGGTGATGCTAATCAGGAATTATTTAATACACTGG
CGTTGCAGTTCTGCAAATAATCTCAATATGTCGGCGTCCTTAAGCAGATC
TCCAATGAGCACTTGGATTGCGGATTTAGCCCCTATGAAATGTACCAATG
GACGCACACGGAGCAGCCAACCACCTCATTGCCCCTGAC
BO10746.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:09:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3399-PD | 3624 | capu-RD | 475..1274 | 17..816 | 4000 | 100 | Plus |
| CG3399-PB | 3150 | capu-RB | 1..800 | 17..816 | 4000 | 100 | Plus |
| CG3399-PA | 3180 | capu-RA | 238..830 | 224..816 | 2965 | 100 | Plus |
| CG3399-PC | 3465 | capu-RC | 524..1115 | 225..816 | 2960 | 100 | Plus |
| CG3399-PD | 3624 | capu-RD | 1283..1397 | 825..939 | 575 | 100 | Plus |
| CG3399-PB | 3150 | capu-RB | 809..923 | 825..939 | 575 | 100 | Plus |
| CG3399-PA | 3180 | capu-RA | 839..953 | 825..939 | 575 | 100 | Plus |
| CG3399-PC | 3465 | capu-RC | 1124..1238 | 825..939 | 575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:18:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| capu-RH | 3713 | CG3399-RH | 394..1316 | 17..939 | 4570 | 99.8 | Plus |
| capu-RB | 3629 | CG3399-RB | 310..1232 | 17..939 | 4570 | 99.8 | Plus |
| capu-RD | 4305 | CG3399-RD | 986..1908 | 17..939 | 4570 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:18:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3884034..3884524 | 709..219 | 2440 | 99.8 | Minus |
| 2L | 23513712 | 2L | 3889430..3889638 | 225..17 | 1045 | 100 | Minus |
| 2L | 23513712 | 2L | 3878895..3879069 | 880..706 | 780 | 98.9 | Minus |
| 2L | 23513712 | 2L | 3875244..3875302 | 939..881 | 295 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:18:32 has no hits.
BO10746.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:48:00 Download gff for
BO10746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-PD | 475..1397 | 17..939 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:04:34 Download gff for
BO10746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3399-PB | 1..923 | 17..939 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:14:13 Download gff for
BO10746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RD | 986..1908 | 17..939 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:36:08 Download gff for
BO10746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RD | 986..1908 | 17..939 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:36:08 Download gff for
BO10746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3878895..3879067 | 708..880 | 98 | <- | Minus |
| 2L | 3875244..3875302 | 881..939 | 100 | <- | Minus |
| 2L | 3884036..3884518 | 225..707 | 100 | <- | Minus |
| 2L | 3889431..3889638 | 17..224 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:14:13 Download gff for
BO10746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3889431..3889638 | 17..224 | 100 | | Minus |
| arm_2L | 3875244..3875302 | 881..939 | 100 | <- | Minus |
| arm_2L | 3878895..3879067 | 708..880 | 98 | <- | Minus |
| arm_2L | 3884036..3884518 | 225..707 | 100 | <- | Minus |
BO10746.complete Sequence
3181 bp assembled on 2007-11-02
GenBank Submission: FJ631863
> BO10746.complete
GAAGTTATCAGTCGACATGCGAGAGAAGGAAAGGGTTCAGAACACGCCCC
CACTAACCAAGCAGCCGCGAAAGAGACGAATAGCCCCACAACCTCCACCG
AAACCCCCACCAAAACCGAGAAAAATTCGTACTGAGAAAACCACCAACGA
TGACCACTGTGCGTTCATTGAGCAGCTCTTTTTCGAAACAACTGAGGCAA
AACCATCGGCTACAGTGGTTGCGGGAGTCACAGGACCTGCAGGACCTTTG
GGGGCTACAACATCCTCGCCGTCGCTGGAAACGCAATCAACTGTTATAAT
TTCGTTTAAATCATCTCAAACACCTGTGCAGTCTCAAACGAATTCTGCAG
CCTCCGAAAATGTTGAGGATGACACAGCGCCCCTGCCACTTCCACCGCCG
CCCCCCGGCTTCGGTACGCCCACCACGCCCCTTTTGTCAAGCAATGTGCT
GAAGAAGGTCGCCAGCTTCACGGTCGAGAAGTCTTCGGCGGGCAATAATA
GCTCGAATCCTCCGAATTTGTGCCCCACCAGTGACGAGACCACCCTCTTG
GCCACACCATGTTCTTCATCGCTGACGGTGGCAACCCTGCCGCCCGAAAT
CGCCGTGGGCGCAGCGGCGGGGGGCGTGGCCGGGGGTGCTGGTTCGCGAC
GCGGCTCATCTTATGTACCGGAAAAGTTAAGCTTCGCTGCATATGAAAAG
TTCGAAGGTCAAATGCTAATAAAATGGCTAATCTCAACGATGCAAAGCAA
TCCGAAGAGTTCCAGCGGTGATGCTAATCAGGAATTATTTAATACACTGG
CGTTGCAGTTCTGCAATAATCTCAAATATGTCGGCGTCCTTAAGCAGATC
TCCAATGAGCACTTGGATTGCGGATTTAGCCCCTATGAAATGTACCAATG
GACGCACACGGAGCAGCCAACCACCTCATTGCCCCTGACCCCTGGCAAGC
TGGACAAGGTGGCGGCTTGGCCATTTTCCAGCACACCATCCGGTATTCGA
GCGCTGGAGTCCGCATCGCTGGCGTCCTTGGGAGCAGGTGGGGTGGCGGG
TTCTTTGGCAACCATTGCCACCGCATCCACAGCCTCATCGGACAATCAGA
AAACCCTGCAGCAGATCCTCAAGAAGCGTCTACTCAACTGCACGACCTTG
GCCGAAGTTCATGCGGTGGTAAACGAGCTGCTGAGCAGCGTGGATGAACC
ACCGCGTCGTCCATCGAAGAGATGTGTGAATCTCACGGAGCTGCTGAACG
CCAGTGAGGCTACCGTTTATGAATACAACAAGACTGGAGCGGAGGGCTGT
GTGAAGAGCTTTACGGATGCGGAAACCCAAACGGAAAGCGAGGATTGCGA
GGGCACCTGCAAGTGCGGCCAATCCTCGACGAAAGTGTCCGATAACGAAA
GTGCAAAGGAAGATGGGGAAAAGCCCCACGCCGTTGCCCCGCCGCCTCCG
CCACCTCCTCCGCCGCTGCACGCCTTTGTTGCGCCGCCTCCTCCTCCTCC
ACCACCACCACCACCTCCTCCGCCACTGGCCAACTATGGAGCACCACCAC
CGCCGCCACCTCCGCCTCCGGGCAGTGGTAGTGCCCCGCCGCCACCTCCA
CCCGCACCCATTGAAGGCGGCGGCGGCATACCGCCTCCACCACCGCCCAT
GAGTGCATCCCCCTCCAAGACGACAATCTCACCCGCTCCACTGCCCGATC
CCGCCGAGGGCAATTGGTTCCATCGCACAAATACCATGCGCAAGAGTGCA
GTTAACCCGCCGAAGCCAATGCGTCCTTTATATTGGACACGGATAGTGAC
GAGTGCGCCGCCTGCGCCACGCCCCCCATCGGTGGCCAATTCCACGGACA
GCACGGAGAACAGCGGGAGCTCACCCGATGAGCCTCCGGCTGCGAATGGT
GCAGATGCTCCGCCCACAGCGCCACCGGCCACCAAGGAGATCTGGACGGA
GATCGAGGAAACGCCATTGGATAATATCGATGAGTTCACGGAACTCTTTT
CCCGCCAAGCCATTGCGCCCGTTAGCAAGCCCAAGGAGCTGAAGGTCAAG
CGAGCCAAGTCCATCAAGGTACTCGATCCGGAGAGATCGCGAAATGTGGG
CATAATCTGGCGGAGTTTACATGTGCCGTCCAGCGAAATCGAGCATGCTA
TCTACCACATAGACACATCGGTGGTCAGTTTGGAGGCGCTGCAGCACATG
AGCAACATTCAGGCGACAGAGGATGAGCTGCAGAGAATCAAGGAGGCAGC
CGGCGGCGATATTCCGCTCGATCATCCCGAACAGTTCCTGCTGGACATAT
CCCTAATTTCCATGGCCAGCGAGAGGATTTCCTGCATTGTCTTTCAGGCG
GAATTCGAGGAGTCCGTAACGCTGTTGTTTCGAAAGCTGGAAACGGTGTC
CCAGCTATCGCAGCAATTGATCGAGAGCGAGGATTTGAAGCTGGTCTTCT
CCATCATCCTTACGCTGGGCAACTATATGAACGGTGGCAACCGGCAGCGC
GGACAAGCGGATGGCTTCAATCTGGATATTCTGGGCAAGCTTAAGGATGT
CAAGTCCAAGGAATCGCACACCACCTTGCTCCATTTCATTGTGCGCACCT
ACATTGCGCAGCGGCGAAAGGAGGGAGTGCATCCCCTGGAGATCCGCTTG
CCCATCCCAGAGCCAGCCGATGTGGAGAGAGCCGCACAAATGGACTTCGA
GGAGGTGCAGCAGCAGATCTTCGATCTCAACAAGAAGTTCTTGGGTTGCA
AGAGAACGACGGCCAAAGTTTTGGCCGCCTCGCGTCCCGAGATCATGGAG
CCCTTCAAGTCCAAAATGGAGGAGTTTGTGGAGGGGGCGGACAAATCGAT
GGCCAAGCTGCATCAATCCCTTGACGAGTGTCGCGATCTCTTTTTGGAGA
CCATGCGCTTCTACCACTTCTCACCCAAAGCCTGCACCCTAACGTTGGCC
CAGTGCACGCCCGACCAGTTCTTCGAGTACTGGACGAATTTCACCAATGA
TTTCAAGGACATTTGGAAGAAGGAGATCACCAGTCTCCTGAATGAATTAA
TGAAGAAATCGAAGCAGGCCCAAATCGAATCGCGTCGCAACGTATCCACC
AAGGTGGAGAAGTCCGGACGGATTTCGCTGAAGGAGCGCATGCTGATGAG
GCGTAGCAAGAACGCAAGCTTTCTAGACCAT
BO10746.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:48:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| capu-RH | 3324 | CG3399-PH | 175..3321 | 17..3163 | 15735 | 100 | Plus |
| capu-RB | 3150 | CG3399-PB | 1..3147 | 17..3163 | 15735 | 100 | Plus |
| capu-RD | 3624 | CG3399-PD | 475..3621 | 17..3163 | 15735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:48:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| capu-RH | 3713 | CG3399-RH | 394..3540 | 17..3163 | 15735 | 100 | Plus |
| capu-RB | 3629 | CG3399-RB | 310..3456 | 17..3163 | 15735 | 100 | Plus |
| capu-RD | 4305 | CG3399-RD | 986..4132 | 17..3163 | 15735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3873383..3874395 | 2746..1734 | 5065 | 100 | Minus |
| 2L | 23513712 | 2L | 3874450..3875302 | 1733..881 | 4265 | 100 | Minus |
| 2L | 23513712 | 2L | 3884034..3884524 | 709..219 | 2440 | 99.8 | Minus |
| 2L | 23513712 | 2L | 3873019..3873323 | 3048..2744 | 1525 | 100 | Minus |
| 2L | 23513712 | 2L | 3889430..3889638 | 225..17 | 1045 | 100 | Minus |
| 2L | 23513712 | 2L | 3878895..3879069 | 880..706 | 875 | 100 | Minus |
| 2L | 23513712 | 2L | 3872833..3872947 | 3163..3049 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:48:26 has no hits.
BO10746.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:41 Download gff for
BO10746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RB | 1..3150 | 17..3164 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:37:24 Download gff for
BO10746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RB | 310..3456 | 17..3165 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:12:06 Download gff for
BO10746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RD | 986..4132 | 17..3165 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:32:03 Download gff for
BO10746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RB | 310..3456 | 17..3165 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:04:21 Download gff for
BO10746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| capu-RD | 986..4132 | 17..3165 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:04:21 Download gff for
BO10746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3889431..3889638 | 17..224 | 100 | | Minus |
| 2L | 3872831..3872947 | 3049..3165 | 98 | <- | Minus |
| 2L | 3873019..3873322 | 2745..3048 | 100 | <- | Minus |
| 2L | 3873385..3874395 | 1734..2744 | 100 | <- | Minus |
| 2L | 3874450..3875302 | 881..1733 | 100 | <- | Minus |
| 2L | 3878895..3879067 | 708..880 | 100 | <- | Minus |
| 2L | 3884036..3884518 | 225..707 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:12:06 Download gff for
BO10746.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3889431..3889638 | 17..224 | 100 | | Minus |
| arm_2L | 3872831..3872947 | 3049..3165 | 98 | <- | Minus |
| arm_2L | 3873019..3873322 | 2745..3048 | 100 | <- | Minus |
| arm_2L | 3873385..3874395 | 1734..2744 | 100 | <- | Minus |
| arm_2L | 3874450..3875302 | 881..1733 | 100 | <- | Minus |
| arm_2L | 3878895..3879067 | 708..880 | 100 | <- | Minus |
| arm_2L | 3884036..3884518 | 225..707 | 100 | <- | Minus |
BO10746.pep Sequence
Translation from 16 to 3181
> BO10746.pep
MREKERVQNTPPLTKQPRKRRIAPQPPPKPPPKPRKIRTEKTTNDDHCAF
IEQLFFETTEAKPSATVVAGVTGPAGPLGATTSSPSLETQSTVIISFKSS
QTPVQSQTNSAASENVEDDTAPLPLPPPPPGFGTPTTPLLSSNVLKKVAS
FTVEKSSAGNNSSNPPNLCPTSDETTLLATPCSSSLTVATLPPEIAVGAA
AGGVAGGAGSRRGSSYVPEKLSFAAYEKFEGQMLIKWLISTMQSNPKSSS
GDANQELFNTLALQFCNNLKYVGVLKQISNEHLDCGFSPYEMYQWTHTEQ
PTTSLPLTPGKLDKVAAWPFSSTPSGIRALESASLASLGAGGVAGSLATI
ATASTASSDNQKTLQQILKKRLLNCTTLAEVHAVVNELLSSVDEPPRRPS
KRCVNLTELLNASEATVYEYNKTGAEGCVKSFTDAETQTESEDCEGTCKC
GQSSTKVSDNESAKEDGEKPHAVAPPPPPPPPPLHAFVAPPPPPPPPPPP
PPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPS
KTTISPAPLPDPAEGNWFHRTNTMRKSAVNPPKPMRPLYWTRIVTSAPPA
PRPPSVANSTDSTENSGSSPDEPPAANGADAPPTAPPATKEIWTEIEETP
LDNIDEFTELFSRQAIAPVSKPKELKVKRAKSIKVLDPERSRNVGIIWRS
LHVPSSEIEHAIYHIDTSVVSLEALQHMSNIQATEDELQRIKEAAGGDIP
LDHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQ
LIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSKES
HTTLLHFIVRTYIAQRRKEGVHPLEIRLPIPEPADVERAAQMDFEEVQQQ
IFDLNKKFLGCKRTTAKVLAASRPEIMEPFKSKMEEFVEGADKSMAKLHQ
SLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTNFTNDFKDIW
KKEITSLLNELMKKSKQAQIESRRNVSTKVEKSGRISLKERMLMRRSKNA
SFLDH
BO10746.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| capu-PH | 1107 | CG3399-PH | 59..1107 | 1..1049 | 5488 | 100 | Plus |
| capu-PB | 1049 | CG3399-PB | 1..1049 | 1..1049 | 5488 | 100 | Plus |
| capu-PD | 1207 | CG3399-PD | 159..1207 | 1..1049 | 5488 | 100 | Plus |
| capu-PI | 1298 | CG3399-PI | 318..1298 | 69..1049 | 5120 | 99.9 | Plus |
| capu-PF | 1361 | CG3399-PF | 381..1361 | 69..1049 | 5120 | 99.9 | Plus |
| capu-PI | 1298 | CG3399-PI | 59..127 | 1..69 | 369 | 100 | Plus |
