Clone Sequence Records
BO10802.3prime Sequence
962 bp (888 high quality bases) assembled on 2006-04-19
> BO10802.3prime
ATGGTCTAGAAAGCTTGCAGGCATGCCAGGCAGTCCACCGCCCACAAGGC
GCTGCTGTTGCTGCTGCTGGTGAATGAGGTTCACCCTAGCTCGTTGCTGC
TCCAACCGCTGCACCGTAGCCGTCAGATGGGAGTTCTCCACATATAGATC
CTTCACCAGGATGTCGGCACTCTGCAATCGCTGTGTCTGATCGGCCAGTA
AAACACCCTGGGTCTCGATTCGGCTATGCAAATCGTTGAGCTCCACTTGA
TGCTGCCGCCAGGATTGCTGCATCAGGGACTCCGTGTAATGCTGCTGCTG
CTTGATGACATTCTGCAGATGGCGATTTCGCAGCTCCAATTGGTTCAGTC
GCTGCTGAAGCGTTGGATGCGTTGTTCGCGCATAGGCCTTCTCGAGCACG
GGTCGCGCCTCCTGCAACTGCTGCAGTTCCATGACCAGACCGTCCCGCTG
CAGACTCAGATCCTTGATTTGCTCCTTGAGGGAGAGCTCGAAGAACTTAA
GGCGCTTCAGTTCCTCCTTCAGTGCCGACGGACTGCTGCACTTCTCGTGG
CTAAGGCAAGACGTTTTACTGTTGGATTCGAAGCTTTTGCCGGACGCCGT
CGACGACGTCTCGCAATCGGCTATCTCTCCCTCCGATGCAGCCGCCTGTT
GGGGACTCTGGGACCGCTTGGGCTTGCTGATCGGAGCTGGGCCGGGATTG
GCGCCGTAGGCGTTGCTGTTGCCACTGTTCGTGGGCGAAGGACCCGACTG
AGAGCTTTCGAAGGGTGTAGTGCTAAAGATGGATGTTTCCGAAGTGGTGA
GGTTATTGCGGCTGGCTGTCTTGTGCGATGGTGAGCCTCCGAGCAATTCG
ATGGCACTGGCGGTGGCTTCATCCTTGGAATCGGCAAGCGATTTCGCTGG
CTCTTGGATGGTGCTCTGCAGCCAGAGGTAGCTGATGGGTGAGCTGGCTG
GACTTTTTTCCG
BO10802.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14025-PB | 3276 | Bsg25D-RB | 2334..3273 | 958..19 | 4700 | 100 | Minus |
| CG14025-PC | 3099 | Bsg25D-RC | 2157..3096 | 958..19 | 4700 | 100 | Minus |
| Bsg25D-P1 | 2226 | Bsg25D-RA | 2073..2222 | 958..809 | 750 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg25D-RG | 4666 | CG14025-RG | 2770..3713 | 962..19 | 4705 | 99.9 | Minus |
| Bsg25D-RC | 4065 | CG14025-RC | 2169..3112 | 962..19 | 4705 | 99.9 | Minus |
| Bsg25D-RB | 4585 | CG14025-RB | 2689..3632 | 962..19 | 4705 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 10:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5273161..5273591 | 379..809 | 2155 | 100 | Plus |
| 2L | 23513712 | 2L | 5272681..5272928 | 19..266 | 1240 | 100 | Plus |
| 2L | 23513712 | 2L | 5274019..5274172 | 809..962 | 755 | 99.4 | Plus |
| 2L | 23513712 | 2L | 5272986..5273098 | 267..379 | 565 | 100 | Plus |
Blast to na_te.dros performed 2015-02-01 10:40:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6692..6895 | 453..247 | 125 | 57.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6815 | 112..51 | 121 | 72.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6472..6557 | 137..48 | 115 | 64.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1515..1575 | 114..51 | 114 | 68.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2373 | 101..51 | 111 | 76.5 | Minus |
BO10802.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:49:34 Download gff for
BO10802.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14025-PB | 2330..3276 | 18..962 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:06:46 Download gff for
BO10802.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14025-PC | 2153..3099 | 18..962 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:30:13 Download gff for
BO10802.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 2689..3638 | 10..962 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:06:27 Download gff for
BO10802.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 2689..3638 | 10..962 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:06:27 Download gff for
BO10802.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5272675..5272928 | 10..266 | 98 | <- | Plus |
| 2L | 5272986..5273097 | 267..378 | 100 | <- | Plus |
| 2L | 5273161..5273590 | 379..808 | 100 | <- | Plus |
| 2L | 5274019..5274172 | 809..962 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:30:13 Download gff for
BO10802.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5272675..5272928 | 10..266 | 98 | <- | Plus |
| arm_2L | 5272986..5273097 | 267..378 | 100 | <- | Plus |
| arm_2L | 5273161..5273590 | 379..808 | 100 | <- | Plus |
| arm_2L | 5274019..5274172 | 809..962 | 99 | | Plus |
BO10802.5prime Sequence
926 bp (837 high quality bases) assembled on 2006-04-19
> BO10802.5prime
GAAGTTATCAGTCGACATGGAGGTATCCGCCGATCCGTACGAGCAGAAGC
TCTACCAAATGTTCCGCAGCTGCGAGACGCAGTGTGGACTTCTGGACGAG
AAGTCCCTGCTGAAGCTCTGCTCACTGCTGGAGCTCCGGGATCAGGGATC
CGCACTGATCGCCAGCCTGGGCGGCAGCCATCAGCTGGGCGTGTCCTTTG
GCCAGTTCAAGGAGGCGCTACTCAACTTCCTGGGCTCCGAGTTCGATGGT
AATACGTCATCGGGTTTCATTGAGCGTTCACTGGTGATTACGGATGAGCC
GCTAAACAACACATACATCGAGAGTCCGCCGGAGTCTTCCGATCGCGAGG
TTTCACCCAAACTCGTCGTGGGCACCAAGAAATACGGTCGCCGGTCTAGG
CCACAGCAGGGAATCTACGAGTTATCCGTCACGGACTCGGACAATACGGA
CGAGGACCAGTTGCAGCAGCAGCAAAATCAGCGAAGCCTCAACGGATGCG
ATGAGCTGGGAGTTCAGGTGCAACGTTCCTCGTCCCAGAGCGATCTTCCT
GGCAGCCGGCGTCTGCGGTCCGTCCACACCAGCGGGAGCAAACTGAAGCG
TTGTGCTTCACTGCCAGCACGCCGGAAGATGAACAGCAACACCACGGGAG
CCACTACATCACCGACGGCAGCGGCCAAGTTGAAACAGCTTTCCATCCAG
AGCCAGGCGCAGCACAGCAGCAGCGTGGAATCACTGGACACCGTGACGCC
GCAGCAATTGGAGACGATCTCAGTGCATAGCATTATGGAAGCCTGGGAGC
TGGCCAGCATTCCCAACACTCGCAACCTACTTCACGTCCTGGGATTCGAT
GAGGAGGAAGAGGTGAACCTGCAGCAGCTAACTAAGGCATTGGAGGAGGA
GCTGCGGGGCATCGATGGGGATCACG
BO10802.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14025-PB | 3276 | Bsg25D-RB | 1..910 | 17..926 | 4525 | 99.8 | Plus |
| CG14025-PC | 3099 | Bsg25D-RC | 77..733 | 270..926 | 3260 | 99.8 | Plus |
| Bsg25D-P1 | 2226 | Bsg25D-RA | 231..477 | 271..517 | 1235 | 100 | Plus |
| Bsg25D-P1 | 2226 | Bsg25D-RA | 1..232 | 17..248 | 1160 | 100 | Plus |
| Bsg25D-P1 | 2226 | Bsg25D-RA | 475..649 | 752..926 | 850 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg25D-RE | 4549 | CG14025-RE | 360..1269 | 17..926 | 4535 | 99.9 | Plus |
| Bsg25D-RB | 4585 | CG14025-RB | 360..1269 | 17..926 | 4535 | 99.9 | Plus |
| Bsg25D-RF | 4525 | CG14025-RF | 360..1245 | 17..926 | 4165 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:27:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5277934..5278189 | 272..17 | 1280 | 100 | Minus |
| 2L | 23513712 | 2L | 5276933..5277181 | 520..272 | 1245 | 100 | Minus |
| 2L | 23513712 | 2L | 5276512..5276734 | 737..515 | 1115 | 100 | Minus |
| 2L | 23513712 | 2L | 5275592..5275781 | 926..737 | 935 | 99.5 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:27:53 has no hits.
BO10802.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:49:35 Download gff for
BO10802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14025-PB | 1..910 | 17..926 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:06:48 Download gff for
BO10802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14025-PB | 1..910 | 17..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:44:45 Download gff for
BO10802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 360..1269 | 17..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:29:15 Download gff for
BO10802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 360..1269 | 17..926 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:29:15 Download gff for
BO10802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5275592..5275780 | 738..926 | 99 | <- | Minus |
| 2L | 5276512..5276731 | 518..737 | 100 | <- | Minus |
| 2L | 5276936..5277180 | 273..517 | 100 | <- | Minus |
| 2L | 5277934..5278189 | 17..272 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:44:45 Download gff for
BO10802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5275592..5275780 | 738..926 | 99 | <- | Minus |
| arm_2L | 5276512..5276731 | 518..737 | 100 | <- | Minus |
| arm_2L | 5276936..5277180 | 273..517 | 100 | <- | Minus |
| arm_2L | 5277934..5278189 | 17..272 | 100 | | Minus |
BO10802.complete Sequence
3307 bp (3307 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631877
> BO10802.complete
GAAGTTATCAGTCGACATGGAGGTATCCGCCGATCCGTACGAGCAGAAGC
TCTACCAAATGTTCCGCAGCTGCGAGACGCAGTGTGGACTTCTGGACGAG
AAGTCCCTGCTGAAGCTCTGCTCACTGCTGGAGCTCCGGGATCAGGGATC
CGCACTGATCGCCAGCCTGGGCGGCAGCCATCAGCTGGGCGTGTCCTTTG
GCCAGTTCAAGGAGGCGCTACTCAACTTCCTGGGCTCCGAGTTCGATGGT
AATACGTCATCGGGTTTCATTGAGCGTTCACTGGTGATTACGGATGAGCC
GCTAAACAACACATACATCGAGAGTCCGCCGGAGTCTTCCGATCGCGAGG
TTTCACCCAAACTCGTCGTGGGCACCAAGAAATACGGTCGCCGGTCTAGG
CCACAGCAGGGAATCTACGAGTTATCCGTCACGGACTCGGACAATACGGA
CGAGGACCAGTTGCAGCAGCAGCAAAATCAGCGAAGCCTCAACGGATGCG
ATGAGCTGGGAGTTCAGGTGCAACGTTCCTCGTCCCAGAGCGATCTTCCT
GGCAGCCGGCGTCTGCGGTCCGTCCACACCAGCGGGAGCAAACTGAAGCG
TTGTGCTTCACTGCCAGCACGCCGGAAGATGAACAGCAACACCACGGGAG
CCACTACATCACCGACGGCAGCGGCCAAGTTGAAACAGCTTTCCATCCAG
AGCCAGGCGCAGCACAGCAGCAGCGTGGAATCACTGGACACCGTGACGCC
GCAGCAATTGGAGACGATCTCAGTGCATAGCATTATGGAAGCCTGGGAGC
TGGCCAGCATTCCCAACACTCGCAACCTACTTCACGTCCTGGGATTCGAT
GAGGAGGAGGAGGTGAACCTGCAGCAGCTAACTAAGGCATTGGAGGAGGA
GCTGCGGGGCATCGATGGGGATCACGAGCAATCGAATATGTTGCGCGCTC
TGGCTGCTCTGCAGGCCACCGAGTTGGGCAACTACAGACTTGCCTATAGG
CAGCAGCATGAGGAGAACCTCAAGCTGAGGGCCGATAATAAGGCGGCCAA
CCAAAGGGTGGCTTTGCTTGCCGTGGAAGTGGATGAGCGGCATGCGTCGC
TGGAGGATAACTCCAAGAAGCAGGTGCAGCAGCTGGAGCAAAGACACGCC
AGCATGGTGCGTGAAATAACGCTGCGGATGACTAATGACCGCGATCACTG
GACCAGCATGACGGGAAAGCTGGAGGCACAGCTTAAATCGCTTGAGCAGG
AGGAGATCCGTCTGAGAACGGAACTTGAACTGGTGCGCACTGAGAACACG
GAGCTTGAGTCGGAGCAGCAAAAGGCTCACATCCAAATCACAGAGCTTCT
CGAACAGAACATTAAGCTCAACCAGGAACTGGCCCAAACGTCGAGCAGCA
TTGGTGGCACCCCGGAGCACAGTCCATTGCGACCGAGAAGGCATAGCGAG
GACAAGGAGGAGGAGATGCTCCAGCTAATGGAGAAGCTGGCTGCTCTTCA
AATGGAGAACGCCCAGCTGCGTGACAAGACTGACGAACTGACCATCGAAA
TCGAGAGCTTAAATGTGGAACTAATTCGCTCGAAAACCAAGGCTAAAAAG
CAAGAAAAACAGGAGAAACAAGAGGACCAGGAGTCGGCGGCCACGGCTAC
CAAAAGGCGTGGGGATTCGCCGAGCAAAACACATCTAACAGAGGAGAGCC
CTCGCTTGGGGAAACAGCGCAAGTGCACCGAAGGAGAGCAGAGCGATGCC
AGCAACAGCGGAGATTGGTTGGCTCTAAACTCCGAGCTGCAAAGAAGTCA
AAGCCAGGATGAGGAGCTAACAAGCCTTAGACAGCGGGTTGCTGAGCTAG
AGGAGGAACTCAAGGCTGCAAAGGAAGGCAGATCTCTCACCCCGGAAAGC
CGTTCGAAGGAACTGGAGACCAGTCTAGAGCAAATGCAGCGTGCCTATGA
GGATTGCGAGGACTACTGGCAAACGAAACTTAGCGAGGAGCGGCAGCTGT
TTGAGAAGGAGCGACAGATCTACGAAGATGAGCAGCACGAGAGCGACAAG
AAGTTCACCGAGCTGATGGAAAAGGTGCGCGAGTACGAGGAGCAGTTCAG
CAAGGATGGCCGCCTCTCGCCCATTGATGAGCGCGATATGCTGGAACAGC
AGTACTCGGAATTGGAGGCAGAGGCAGCCCAGCTGCGCTCGAGTTCCATT
CAAATGCTCGAGGAGAAGGCTCAGGAAATCAGTTCACTGCAATCAGAGAT
CGAGGATTTGCGACAGAGATTGGGTGAGAGCGTTGAGATCCTCACAGGCG
CCTGTGAACTCACCTCGGAGTCGGTAGCCCAACTGAGTGCCGAGGCGGGA
AAAAGTCCAGCCAGCTCACCCATCAGCTACCTCTGGCTGCAGAGCACCAT
CCAAGAGCCAGCGAAATCGCTTGCCGATTCCAAGGATGAAGCCACCGCCA
GTGCCATCGAATTGCTCGGAGGCTCACCATCGCACAAGACAGCCAGCCGC
AATAACCTCACCACTTCGGAAACATCCATCTTTAGCACTACACCCTTCGA
AAGCTCTCAGTCGGGTCCTTCGCCCACGAACAGTGGCAACAGCAACGCCT
ACGGCGCCAATCCCGGCCCAGCTCCGATCAGCAAGCCCAAGCGGTCCCAG
AGTCCCCAACAGGCGGCTGCATCGGAGGGAGAGATAGCCGATTGCGAGAC
GTCGTCGACGGCGTCCGGCAAAAGCTTCGAATCCAACAGTAAAACGTCTT
GCCTTAGCCACGAGAAGTGCAGCAGTCCGTCGGCACTGAAGGAGGAACTG
AAGCGCCTTAAGTTCTTCGAGCTCTCCCTCAAGGAGCAAATCAAGGATCT
GAGTCTGCAGCGGGACGGTCTGGTCATGGAACTGCAGCAGTTGCAGGAGG
CGCGACCCGTGCTCGAGAAGGCCTATGCGCGAACAACGCATCCAACGCTT
CAGCAGCGACTGAACCAATTGGAGCTGCGAAATCGCCATCTGCAGAATGT
CATCAAGCAGCAGCAGCATTACACGGAGTCCCTGATGCAGCAATCCTGGC
GGCAGCATCAAGTGGAGCTCAACGATTTGCATAGCCGAATCGAGACCCAG
GGTGTTTTACTGGCCGATCAGACACAGCGATTGCAGAGTGCCGACATCCT
GGTGAAGGATCTATATGTGGAGAACTCCCATCTGACGGCTACGGTGCAGC
GGTTGGAGCAGCAACGAGCTAGGGTGAACCTCATTCACCAGCAGCAGCAA
CAGCAGCGCCTTGTGGGCGGTGGACTGCCTGGCATGCCTGCAAGCTTTCT
AGACCAT
BO10802.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:28:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg25D-RB | 3276 | CG14025-PB | 1..3273 | 17..3289 | 16365 | 100 | Plus |
| Bsg25D-RC | 3099 | CG14025-PC | 77..3096 | 270..3289 | 15100 | 100 | Plus |
| Bsg25D-RG | 3357 | CG14025-PG | 802..3354 | 737..3289 | 12765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:28:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg25D-RB | 4585 | CG14025-RB | 360..3632 | 17..3289 | 16365 | 100 | Plus |
| Bsg25D-RC | 4065 | CG14025-RC | 93..3112 | 270..3289 | 15100 | 100 | Plus |
| Bsg25D-RG | 4666 | CG14025-RG | 1161..3713 | 737..3289 | 12765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:28:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5274019..5275781 | 2499..737 | 8815 | 100 | Minus |
| 2L | 23513712 | 2L | 5273161..5273591 | 2929..2499 | 2155 | 100 | Minus |
| 2L | 23513712 | 2L | 5277934..5278189 | 272..17 | 1280 | 100 | Minus |
| 2L | 23513712 | 2L | 5276933..5277181 | 520..272 | 1245 | 100 | Minus |
| 2L | 23513712 | 2L | 5272681..5272928 | 3289..3042 | 1240 | 100 | Minus |
| 2L | 23513712 | 2L | 5276512..5276734 | 737..515 | 1115 | 100 | Minus |
| 2L | 23513712 | 2L | 5272986..5273098 | 3041..2929 | 565 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 13:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6692..6895 | 2855..3061 | 125 | 57.7 | Plus |
BO10802.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:58 Download gff for
BO10802.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 1..3276 | 17..3290 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:14:14 Download gff for
BO10802.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 370..3648 | 17..3298 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:49:03 Download gff for
BO10802.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 360..3632 | 17..3291 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:58 Download gff for
BO10802.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 370..3648 | 17..3298 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:19 Download gff for
BO10802.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25D-RB | 360..3632 | 17..3291 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:19 Download gff for
BO10802.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5272679..5272928 | 3042..3291 | 99 | <- | Minus |
| 2L | 5272986..5273097 | 2930..3041 | 100 | <- | Minus |
| 2L | 5273161..5273590 | 2500..2929 | 100 | <- | Minus |
| 2L | 5274019..5275780 | 738..2499 | 100 | <- | Minus |
| 2L | 5276512..5276731 | 518..737 | 100 | <- | Minus |
| 2L | 5276936..5277180 | 273..517 | 100 | <- | Minus |
| 2L | 5277934..5278189 | 17..272 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:49:03 Download gff for
BO10802.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5272679..5272928 | 3042..3291 | 99 | <- | Minus |
| arm_2L | 5272986..5273097 | 2930..3041 | 100 | <- | Minus |
| arm_2L | 5273161..5273590 | 2500..2929 | 100 | <- | Minus |
| arm_2L | 5274019..5275780 | 738..2499 | 100 | <- | Minus |
| arm_2L | 5276512..5276731 | 518..737 | 100 | <- | Minus |
| arm_2L | 5276936..5277180 | 273..517 | 100 | <- | Minus |
| arm_2L | 5277934..5278189 | 17..272 | 100 | | Minus |
BO10802.pep Sequence
Translation from 16 to 3307
> BO10802.pep
MEVSADPYEQKLYQMFRSCETQCGLLDEKSLLKLCSLLELRDQGSALIAS
LGGSHQLGVSFGQFKEALLNFLGSEFDGNTSSGFIERSLVITDEPLNNTY
IESPPESSDREVSPKLVVGTKKYGRRSRPQQGIYELSVTDSDNTDEDQLQ
QQQNQRSLNGCDELGVQVQRSSSQSDLPGSRRLRSVHTSGSKLKRCASLP
ARRKMNSNTTGATTSPTAAAKLKQLSIQSQAQHSSSVESLDTVTPQQLET
ISVHSIMEAWELASIPNTRNLLHVLGFDEEEEVNLQQLTKALEEELRGID
GDHEQSNMLRALAALQATELGNYRLAYRQQHEENLKLRADNKAANQRVAL
LAVEVDERHASLEDNSKKQVQQLEQRHASMVREITLRMTNDRDHWTSMTG
KLEAQLKSLEQEEIRLRTELELVRTENTELESEQQKAHIQITELLEQNIK
LNQELAQTSSSIGGTPEHSPLRPRRHSEDKEEEMLQLMEKLAALQMENAQ
LRDKTDELTIEIESLNVELIRSKTKAKKQEKQEKQEDQESAATATKRRGD
SPSKTHLTEESPRLGKQRKCTEGEQSDASNSGDWLALNSELQRSQSQDEE
LTSLRQRVAELEEELKAAKEGRSLTPESRSKELETSLEQMQRAYEDCEDY
WQTKLSEERQLFEKERQIYEDEQHESDKKFTELMEKVREYEEQFSKDGRL
SPIDERDMLEQQYSELEAEAAQLRSSSIQMLEEKAQEISSLQSEIEDLRQ
RLGESVEILTGACELTSESVAQLSAEAGKSPASSPISYLWLQSTIQEPAK
SLADSKDEATASAIELLGGSPSHKTASRNNLTTSETSIFSTTPFESSQSG
PSPTNSGNSNAYGANPGPAPISKPKRSQSPQQAAASEGEIADCETSSTAS
GKSFESNSKTSCLSHEKCSSPSALKEELKRLKFFELSLKEQIKDLSLQRD
GLVMELQQLQEARPVLEKAYARTTHPTLQQRLNQLELRNRHLQNVIKQQQ
HYTESLMQQSWRQHQVELNDLHSRIETQGVLLADQTQRLQSADILVKDLY
VENSHLTATVQRLEQQRARVNLIHQQQQQQRLVGGGLPGMPASFLDH
BO10802.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:35:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg25D-PB | 1091 | CG14025-PB | 1..1091 | 1..1091 | 5455 | 100 | Plus |
| Bsg25D-PG | 1118 | CG14025-PG | 1..1118 | 1..1091 | 5417 | 97.6 | Plus |
| Bsg25D-PE | 1079 | CG14025-PE | 1..1079 | 1..1091 | 5374 | 98.9 | Plus |
| Bsg25D-PF | 1071 | CG14025-PF | 1..1071 | 1..1091 | 5314 | 98.2 | Plus |
| Bsg25D-PC | 1032 | CG14025-PC | 10..1032 | 60..1091 | 5026 | 98 | Plus |
