Clone BO10803 Report

Search the DGRC for BO10803

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:108
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptPk61C-RA
Protein status:BO10803.pep:
Sequenced Size:2299

Clone Sequence Records

BO10803.3prime Sequence

783 bp (761 high quality bases) assembled on 2006-04-19

> BO10803.3prime
ATGGTCTAGAAAGCTTGCCTTAGACGCCGTCTTCTTGCTAGGTGACGTCC
CCGTTCTGGTGCTACCCAATGTCCGGTTGTCAGACGCCGTCGAAGCTTGA
GGAGCGTTTACGGGGGAACTGCGTTTCACCGTGGGCGAATTGCTTGAGGA
GGCGGCGGATGAATTTGAGATGACAGCCAGGCTATTACTGCTGCCGCTGG
AGCAGGACACTGCAGATGTGGAGGAGGGATCTCCGTAGGCCAACTTGCGC
ATGTTCTCAATAGCTTCCGACCAGTGGATAGCATAGCCTTCGGGATCATC
CAGGTAATAGGTTCGATTTGGCGTATGGACAAAAAAAATTTTGAAGTTTT
TGTACTCCGCTCGGAGATCTGGGCTCCACGGAATTTCTCCTTTTTTGATC
ATCTGCACGGGATCGATATAGATGAGTCGCGGTCCCGTGGTCAGAAGGAG
CATTCGCTTGCGGGCAAACAGACCCTTGCGCTTGTTGACAAACCCCTTCT
TGAGGATCACTTCGCCGTCGGCAAAAACGTGCCACTTGTCAGTCTTTTGT
TGCTCGAGACGCTGCAGCTTCTCGGCATCGTTCAGGTCGAAAGAGTTCTT
TGCGGTCGATCGCTTGACGGGCATGGCCACGCTGCTGCCAACGCCTAATT
CTGCACTAAGCAGTCGCGATATCTGCCGTTCGTCAAGGCCAGGCTCCAAA
TCCCCGGGCACAGTATAGCTGGACCTGAAGTCCTCATCCTGACTTACGCC
CGGTAAGTATGGGTAATGGGGGGGAGGGGGGTT

BO10803.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG1210-PC 2460 Pk61C-RC 1711..2457 765..19 3735 100 Minus
CG1210-PG 1620 Pk61C-RG 871..1617 765..19 3735 100 Minus
CG1210-PB 1620 Pk61C-RB 871..1617 765..19 3735 100 Minus
CG1210-PE 1620 Pk61C-RE 871..1617 765..19 3735 100 Minus
CG1210-PD 2511 Pk61C-RD 1762..2508 765..19 3735 100 Minus
CG1210-PA 2268 Pk61C-RA 1519..2265 765..19 3735 100 Minus
CG1210-PH 2268 Pk61C-RH 1519..2265 765..19 3735 100 Minus
CG1210-PF 2268 Pk61C-RF 1519..2265 765..19 3735 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 16:31:11
Subject Length Description Subject Range Query Range Score Percent Strand
Pdk1-RJ 4959 CG1210-RJ 2121..2881 779..19 3760 99.7 Minus
Pdk1-RF 4162 CG1210-RF 1926..2686 779..19 3760 99.7 Minus
Pdk1-RH 4347 CG1210-RH 2111..2871 779..19 3760 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 16:31:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 143514..143817 322..19 1520 100 Minus
3L 28110227 3L 142943..143217 596..322 1375 100 Minus
3L 28110227 3L 142697..142879 779..597 870 98.4 Minus
Blast to na_te.dros performed on 2015-02-03 16:31:08 has no hits.

BO10803.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:49:36 Download gff for BO10803.3prime
Subject Subject Range Query Range Percent Splice Strand
Pk61C-PF 1502..2268 15..783 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:06:50 Download gff for BO10803.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1210-PF 1502..2268 15..783 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:27:40 Download gff for BO10803.3prime
Subject Subject Range Query Range Percent Splice Strand
Pdk1-RF 1923..2689 15..783 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:54:54 Download gff for BO10803.3prime
Subject Subject Range Query Range Percent Splice Strand
Pdk1-RH 2108..2874 15..783 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:54:54 Download gff for BO10803.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 142694..142879 597..783 97 -> Minus
3L 142943..143217 322..596 100 -> Minus
3L 143515..143820 15..321 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:27:40 Download gff for BO10803.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 142694..142879 597..783 97 -> Minus
arm_3L 142943..143217 322..596 100 -> Minus
arm_3L 143515..143820 15..321 99   Minus

BO10803.5prime Sequence

931 bp (859 high quality bases) assembled on 2006-04-19

> BO10803.5prime
GAAGTTATCAGTCGACATGCCGGCTATGGCCAAGGAGAAAGCATCAGCAA
CAGTGTCCTTGGGCGAGTCGAATTTCAGAGATATCAACCTAAAAGACTTG
GCCGTGGTCGTCGAAGCGGCATCGCGGCTGCACCACCAGCAAAACGTATG
CGGCTGCGGAGCGGTATCGTCTACTGAGAACAACAACAACAGTCGCTACG
GCAGCAGCAAGTATCTGACAAACGGCCACACGTCGCCTTTGGCGGCAGCG
GTTGCTAGCAACAGTTCGTCGGTGGCCACGACACCGCATTGCAGAATGTT
GCACAACTGCAGTCTGCAGCAGTACCAGAATGACATAAGGCAGCAGACGG
AGATATTGGACATGTTGCGGCAGCAGCATCAGCAGGGCTACCAGTCGCAG
CAACAGCAACAACAGCCGCAGCAGCAGCAGGAACAACAGCAGCAGCAGGA
GCAATCGCAGCAGCAGCAACAGCTACAGAATCCTGCGCCCAGGAGGTCTC
CGAATGATTTCATTTTCGGTCGTTACATAGGCGAGGGCAGCTATAGCATA
GTTTATCTGGCCGTGGATATACACTCTCGCCGCGAGTATGCAATTAAAGT
ATGCGAGAAGCGGCTGATCCTGCGCGAACGGAAGCAGGACTACATCAAGC
GTGAACGCGAGGTGATGCACCAGATGACCAACGTTCCCGGCTTCGTAAAC
CTGTCGTGCACCTTCCAGGACCAGCGTTCTCTTTACTTTGTGATGACGTA
CGCGCGAAAGGGCGACATGTTGCCATACATCAACCGCGTGGGTAGCTTTG
ACGTGGCCTGCACGCGCCACTACGCTGCCGAGCTTCTGCTGGCCTGCGAG
CACATGCACCGCCGGTATGTGGTGCACCGCGACCTCAAGCCCGAGAACAT
CCTGCTCGACGAGGACATGCACACGCTAATC

BO10803.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG1210-PC 2460 Pk61C-RC 193..1107 17..931 4525 99.7 Plus
CG1210-PD 2511 Pk61C-RD 244..1158 17..931 4525 99.7 Plus
CG1210-PA 2268 Pk61C-RA 1..915 17..931 4525 99.7 Plus
CG1210-PH 2268 Pk61C-RH 1..915 17..931 4525 99.7 Plus
CG1210-PF 2268 Pk61C-RF 1..915 17..931 4525 99.7 Plus
CG1210-PG 1620 Pk61C-RG 1..267 665..931 1285 99.2 Plus
CG1210-PB 1620 Pk61C-RB 1..267 665..931 1285 99.2 Plus
CG1210-PE 1620 Pk61C-RE 1..267 665..931 1285 99.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
Pdk1-RJ 4959 CG1210-RJ 617..1531 17..931 4545 99.8 Plus
Pdk1-RF 4162 CG1210-RF 422..1336 17..931 4545 99.8 Plus
Pdk1-RH 4347 CG1210-RH 607..1521 17..931 4545 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:32:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 135966..136339 224..597 1855 99.7 Plus
3L 28110227 3L 141765..142107 589..931 1670 99.1 Plus
3L 28110227 3L 135635..135843 17..225 1045 100 Plus
Blast to na_te.dros performed 2015-02-12 01:32:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2686 125..474 268 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2338..2660 179..484 190 56.5 Plus

BO10803.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:49:37 Download gff for BO10803.5prime
Subject Subject Range Query Range Percent Splice Strand
Pk61C-PF 1..915 17..931 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:06:51 Download gff for BO10803.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1210-PD 236..1158 10..931 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:21:04 Download gff for BO10803.5prime
Subject Subject Range Query Range Percent Splice Strand
Pdk1-RH 599..1521 10..931 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:25:32 Download gff for BO10803.5prime
Subject Subject Range Query Range Percent Splice Strand
Pdk1-RH 599..1521 10..931 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:25:32 Download gff for BO10803.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 135627..135842 10..224 98 -> Plus
3L 135967..136335 225..593 100 -> Plus
3L 141770..142107 594..931 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:21:04 Download gff for BO10803.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 135627..135842 10..224 98 -> Plus
arm_3L 135967..136335 225..593 100 -> Plus
arm_3L 141770..142107 594..931 99   Plus

BO10803.complete Sequence

2299 bp assembled on 2008-01-16

GenBank Submission: FJ631878

> BO10803.complete
GAAGTTATCAGTCGACATGCCGGCTATGGCCAAGGAGAAAGCATCAGCAA
CAGTGTCCTTGGGCGAGTCGAATTTCAGAGATATCAACCTAAAAGACTTG
GCCGTGGTCGTCGAAGCGGCATCGCGGCTGCACCACCAGCAAAACGTATG
CGGCTGCGGAGCGGTATCGTCTACTGAGAACAACAACAACAGTCGCTACG
GCAGCAGCAAGTATCTGACAAACGGCCACACGTCGCCTTTGGCGGCAGCG
GTTGCTAGCAACAGTTCGTCGGTGGCCACGACACCGCATTGCAGAATGTT
GCACAACTGCAGTCTGCAGCAGTACCAGAATGACATAAGGCAGCAGACGG
AGATATTGGACATGTTGCGGCAGCAGCATCAGCAGGGCTACCAGTCGCAG
CAACAGCAACAACAGCCGCAGCAGCAGCAGGAACAACAGCAGCAGCAGGA
GCAATCGCAGCAGCAGCAACAGCTACAGAATCCTGCGCCCAGGAGGTCTC
CGAATGATTTCATTTTCGGTCGTTACATAGGCGAGGGCAGCTATAGCATA
GTTTATCTGGCCGTGGATATACACTCTCGCCGCGAGTATGCAATTAAAGT
ATGCGAGAAGCGGCTGATCCTGCGCGAACGGAAGCAGGACTACATCAAGC
GTGAACGCGAGGTGATGCACCAGATGACCAACGTTCCCGGCTTCGTAAAC
CTGTCGTGCACCTTCCAGGACCAGCGTTCTCTTTACTTTGTGATGACGTA
CGCGCGAAAGGGCGACATGTTGCCATACATCAACCGCGTGGGTAGCTTTG
ACGTGGCCTGCACGCGCCACTACGCTGCCGAGCTTCTGCTGGCCTGCGAG
CACATGCACCGCCGTAATGTGGTGCACCGCGACCTCAAGCCCGAGAACAT
CCTGCTCGACGAGGACATGCACACGCTAATCGCCGACTTCGGTTCCGCCA
AGGTGATGACAGCCCACGAAAGGGCTCTGGCCACGGAGCACTGTTCGGAG
CAGCGGCGCAGCAACTCCGATGAAGACGATGAAGACAGCGACCGCCTGGA
AAACGAAGACGAAGACTTCTACGATCGCGATTCGGAGGAGTTGGACGACG
GCGACGACGAACAGCAGCAGGAAGAGATGGACTCCCCACGCCATCGTCAA
AGGCGTTACAACCGTCACCGAAAGGCAAGCTTTGTGGGCACTGCCCAGTA
CGTTTCACCGGAAGTGCTCCAAAATGGACCTATAACCCCGGCGGCGGACC
TGTGGGCACTGGGATGTATAGTTTATCAGATGATCGCCGGCCTACCGCCA
TTCCGTGGCAGCAACGATTATGTCATTTTTAAAGAGATTCTTGACTGCGC
CGTGGACTTCCCGCAAGGCTTTGATAAGGACGCCGAGGACCTGGTGCGCA
AGCTGCTCCGTGTCGATCCGCGAGACCGCCTGGGTGCTCAGGACGAGTTT
GGATATTACGAATCCATTCGGGCGCACCCATTCTTCGCCGGCATTGACTG
GCAGACGCTCCGTCAACAAACCCCTCCCCCCATCTACCCATACTTACCGG
GCGTAAGTCAGGATGAGGACTTCAGGTCCAGCTATACTGTGCCCGGGGAT
TTGGAGCCTGGCCTTGACGAACGGCAGATATCGCGACTGCTTAGTGCAGA
ATTAGGCGTTGGCAGCAGCGTGGCCATGCCCGTCAAGCGATCGACCGCAA
AGAACTCTTTCGACCTGAACGATGCCGAGAAGCTGCAGCGTCTCGAGCAA
CAAAAGACTGACAAGTGGCACGTTTTTGCCGACGGCGAAGTGATCCTCAA
GAAGGGGTTTGTCAACAAGCGCAAGGGTCTGTTTGCCCGCAAGCGAATGC
TCCTTCTGACCACGGGACCGCGACTCATCTATATCGATCCCGTGCAGATG
ATCAAAAAAGGAGAAATTCCGTGGAGCCCAGATCTCCGAGCGGAGTACAA
AAACTTCAAAATTTTTTTTGTCCATACGCCAAATCGAACCTATTACCTGG
ATGATCCCGAAGGCTATGCTATCCACTGGTCGGAAGCTATTGAGAACATG
CGCAAGTTGGCCTACGGAGATCCCTCCTCCACATCTGCAGTGTCCTGCTC
CAGCGGCAGCAGTAATAGCCTGGCTGTCATCTCAAATTCATCCGCCGCCT
CCTCAAGCAATTCGCCCACGGTGAAACGCAGTTCCCCCGTAAACGCTCCT
CAAGCTTCGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACGGG
GACGTCACCTAGCAAGAAGACGGCGTCTAAGGCAAGCTTTCTAGACCAT

BO10803.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:49:49
Subject Length Description Subject Range Query Range Score Percent Strand
Pdk1-RJ 2511 CG1210-PJ 244..2508 17..2281 11325 100 Plus
Pdk1-RF 2268 CG1210-PF 1..2265 17..2281 11325 100 Plus
Pdk1-RH 2268 CG1210-PH 1..2265 17..2281 11325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
Pdk1-RJ 4959 CG1210-RJ 617..2881 17..2281 11325 100 Plus
Pdk1-RF 4162 CG1210-RF 422..2686 17..2281 11325 100 Plus
Pdk1-RH 4347 CG1210-RH 607..2871 17..2281 11325 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:49:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 141765..142879 589..1703 5560 99.9 Plus
3L 28110227 3L 135966..136339 224..597 1855 99.7 Plus
3L 28110227 3L 143514..143817 1978..2281 1520 100 Plus
3L 28110227 3L 142943..143217 1704..1978 1375 100 Plus
3L 28110227 3L 135635..135843 17..225 1045 100 Plus
Blast to na_te.dros performed 2014-11-27 16:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2686 125..474 268 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2338..2660 179..484 190 56.5 Plus

BO10803.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:44 Download gff for BO10803.complete
Subject Subject Range Query Range Percent Splice Strand
Pk61C-RA 1..2268 17..2285 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:29:19 Download gff for BO10803.complete
Subject Subject Range Query Range Percent Splice Strand
Pk61C-RA 875..3139 17..2283 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:16 Download gff for BO10803.complete
Subject Subject Range Query Range Percent Splice Strand
Pdk1-RH 607..2871 17..2283 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:44 Download gff for BO10803.complete
Subject Subject Range Query Range Percent Splice Strand
Pk61C-RA 867..3142 10..2285 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:59 Download gff for BO10803.complete
Subject Subject Range Query Range Percent Splice Strand
Pdk1-RH 607..2871 17..2283 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:59 Download gff for BO10803.complete
Subject Subject Range Query Range Percent Splice Strand
3L 135635..135842 17..224 100 -> Plus
3L 135967..136335 225..593 100 -> Plus
3L 141770..142879 594..1703 100 -> Plus
3L 142943..143217 1704..1978 100 -> Plus
3L 143515..143817 1979..2283 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:16 Download gff for BO10803.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 135635..135842 17..224 100 -> Plus
arm_3L 135967..136335 225..593 100 -> Plus
arm_3L 141770..142879 594..1703 100 -> Plus
arm_3L 142943..143217 1704..1978 100 -> Plus
arm_3L 143515..143817 1979..2283 99   Plus

BO10803.pep Sequence

Translation from 16 to 2299

> BO10803.pep
MPAMAKEKASATVSLGESNFRDINLKDLAVVVEAASRLHHQQNVCGCGAV
SSTENNNNSRYGSSKYLTNGHTSPLAAAVASNSSSVATTPHCRMLHNCSL
QQYQNDIRQQTEILDMLRQQHQQGYQSQQQQQQPQQQQEQQQQQEQSQQQ
QQLQNPAPRRSPNDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKVCEKRL
ILRERKQDYIKREREVMHQMTNVPGFVNLSCTFQDQRSLYFVMTYARKGD
MLPYINRVGSFDVACTRHYAAELLLACEHMHRRNVVHRDLKPENILLDED
MHTLIADFGSAKVMTAHERALATEHCSEQRRSNSDEDDEDSDRLENEDED
FYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEV
LQNGPITPAADLWALGCIVYQMIAGLPPFRGSNDYVIFKEILDCAVDFPQ
GFDKDAEDLVRKLLRVDPRDRLGAQDEFGYYESIRAHPFFAGIDWQTLRQ
QTPPPIYPYLPGVSQDEDFRSSYTVPGDLEPGLDERQISRLLSAELGVGS
SVAMPVKRSTAKNSFDLNDAEKLQRLEQQKTDKWHVFADGEVILKKGFVN
KRKGLFARKRMLLLTTGPRLIYIDPVQMIKKGEIPWSPDLRAEYKNFKIF
FVHTPNRTYYLDDPEGYAIHWSEAIENMRKLAYGDPSSTSAVSCSSGSSN
SLAVISNSSAASSSNSPTVKRSSPVNAPQASTASDNRTLGSTRTGTSPSK
KTASKASFLDH

BO10803.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Pdk1-PJ 836 CG1210-PJ 82..836 1..755 3945 100 Plus
Pdk1-PF 755 CG1210-PF 1..755 1..755 3945 100 Plus
Pdk1-PH 755 CG1210-PH 1..755 1..755 3945 100 Plus
Pdk1-PA 755 CG1210-PA 1..755 1..755 3945 100 Plus
Pdk1-PD 836 CG1210-PD 82..836 1..755 3945 100 Plus