Clone BO10832 Report

Search the DGRC for BO10832

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:108
Well:32
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO10832.pep: validated full length
Sequenced Size:2530

Clone Sequence Records

BO10832.3prime Sequence

919 bp (760 high quality bases) assembled on 2006-04-19

> BO10832.3prime
ATGGTCTAGAAAGCTTGCAGAATAAGGCCACGTCTCCGATTTGGCAGCGG
CCGCACTGGAAAGCTTCTGCAGCGGCTCCTGCTCTTCAACATTGTTGGTT
GTCGTTTCGGTTACATCAGTAAACGCTATCTTGTAGACATCCTCGTAGGT
GGTGGCAAAGTGAACCTCCAGACCATCTGTAATGTACGTGGGCAACTCCT
CGAAGTCTTTCTTGTTATCCACAGGCAGAATAAGACAATTCACTCCACTA
CGACGTGCTGCAATCGTCTTTTCCTTAATACCACCCACGGGTAGCACTTT
TCCCTTCAGGGATACTTCGCCCGTCATAGCGATATCTTGGCGCACCGGCT
TTCCAGTGGCCAACGATACGAGAGCTGTAATAATGGTGATGCCCGCACTG
GGGCCATCTTTCGGTGTGGCACCTTCAGGAACATGGAGGTGAATGTGCTC
TTGCTCTAAGAACAGATTATTGGGTTCCAGCGAATATAAAAAGTTGCGCG
CCACCGTTAAGGCTATTTGGGCCGACTCCTTCATGACATCTCCCAAATTT
CCGGTGATGTGCAGCGATCCGGCGACAGTGTTCGGATCTGTTTTTGCCCC
CTGGCGAATGTGACGCCTTGAGGTTTCGATGTAAAGCGATGAACCACCCA
TGGCGGTCCAGGCCAGACCCATGACTACACCCACCGGTGTGGTTGCGTAC
ATGCGATCTGAGCTAAAGATTTGTTTGCCCAGGAATGTGGTCAGATTATC
AGCGTTAACCGGAAAGTGCTCGCCTTCTTTTTTGACCACTCGGAAGGCCA
CCTTGCGAATAACTTTCTCGATATGCTTTTGCAGGTTTCGCACCCCGGAA
TCCCGGCAATAACTGCGAATCAGCATGTTTAGGGCATCCTCGGAAATGTT
GATATGCTTGTCCGTTTAT

BO10832.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:11:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG8798-PA 3021 CG8798-RA 2121..3018 916..19 4465 99.8 Minus
CG8798-PB 2499 CG8798-RB 1599..2496 916..19 4465 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RC 3761 CG8798-RC 2292..3189 916..19 4475 99.9 Minus
Lon-RA 3707 CG8798-RA 2238..3135 916..19 4475 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19608980..19609448 448..916 2330 99.8 Plus
3L 28110227 3L 19608429..19608668 19..258 1200 100 Plus
3L 28110227 3L 19608731..19608921 258..448 955 100 Plus
Blast to na_te.dros performed on 2015-02-11 11:30:38 has no hits.

BO10832.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:50:35 Download gff for BO10832.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PA 2118..3021 18..919 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:08:07 Download gff for BO10832.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PB 1596..2499 18..919 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:29:01 Download gff for BO10832.3prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 2235..3142 10..919 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:43:09 Download gff for BO10832.3prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 2235..3142 10..919 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:43:09 Download gff for BO10832.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 19608422..19608668 10..258 98 <- Plus
3L 19608732..19608921 259..448 100 <- Plus
3L 19608981..19609451 449..919 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:29:01 Download gff for BO10832.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19601522..19601768 10..258 98 <- Plus
arm_3L 19601832..19602021 259..448 100 <- Plus
arm_3L 19602081..19602551 449..919 99   Plus

BO10832.5prime Sequence

919 bp (760 high quality bases) assembled on 2006-04-19

> BO10832.5prime
GAAGTTATCAGTCGACATGGTTGTGGTGGCCCATCGTCGTATTCGTATAA
CAGGTCAGGTGGTAGAGGACGTGCCACCTCCTAAGCCCGCTGAAGATCAA
AGCACTGATCAAGCGGATGCGGCACCTATAAAATCAAGATCCGACCCAGC
CCGAAAGCCCCGTGGCCGAATTCCCAGGAGTCGGACCGGAAAATCACGTG
AATCGGCGGCTGCTGAAGAACTTATACAAAACCAGACTCTGGAGCCGCCA
CTGAAATCAGGCAAAGTCGAGTCATCGAGCTTGCCAAAGCCTCCAACAGA
AGAAAAGATAGTGGAACCTGAGACTGGTGCCAAAGAAAATGTTAATCAAT
CTGCGCCCAGCGCCCAACCTGTTCTTATTGTTGAAGTGGAGAACGTAAAG
CAACCGATCTATAAACAAACGGAAGAGGTGAAGGCATTAACTCAGGAGAT
AATCAAGACTCTTCGGGACATAATCACAATGAATCCCTTGTATAGAGAGA
GTCTACAGCAGATGCTGCACCAAAATCAACGAGTTGTCGACAACCCCATT
TATCTGTGCGATTTAGGAGCATCCCTTTCCGCTGGAGAACCAGCTGAGCT
GCAAAAAATTCTTGAGGAAACAGATATCCCAGAACGTCTACAATTGGCCT
TAACTTTACTCAAAAAGGAGTTGGAACTCTCCAGGCTCCAACAAAAAATT
GGACGCGAAGTAGAGGAAAAAGTCAAGCAGCAACATCGCAAATATATACT
CCAGGAACAGTTGAAAGTCATCAAAAAAGAACTGGGCATCGAAAAAGACG
ACAAGGATGCCATTGGTGAAAAGTACCGCGAAAAGCTGAAGGATAAAGTG
GTTCCCGAAGCTATTATGACGGTTATTGATGAAGAACTCACAAAGCTGAA
CTTCCTGGAGAGTCATAGT

BO10832.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG8798-PA 3021 CG8798-RA 522..1425 16..919 4470 99.7 Plus
CG8798-PB 2499 CG8798-RB 1..903 17..919 4465 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RA 3707 CG8798-RA 639..1542 16..919 4490 99.8 Plus
Lon-RC 3761 CG8798-RC 766..1596 89..919 4125 99.8 Plus
Lon-RC 3761 CG8798-RC 639..712 16..89 370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19610802..19611208 495..89 2035 100 Minus
3L 28110227 3L 19610263..19610556 919..626 1440 99.3 Minus
3L 28110227 3L 19610615..19610746 625..494 660 100 Minus
3L 28110227 3L 19611325..19611398 89..16 370 100 Minus
Blast to na_te.dros performed 2015-02-10 21:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
1731 4648 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). 978..1073 383..477 143 64.9 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 3722..3797 384..459 128 63.2 Plus

BO10832.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:50:36 Download gff for BO10832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PA 509..1425 4..919 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:08:08 Download gff for BO10832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8798-PA 509..1425 4..919 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:52:09 Download gff for BO10832.5prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 626..1542 4..919 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:52:43 Download gff for BO10832.5prime
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 626..1542 4..919 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:52:43 Download gff for BO10832.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19611325..19611411 4..89 94   Minus
3L 19610263..19610556 626..919 99 <- Minus
3L 19610615..19610744 496..625 100 <- Minus
3L 19610802..19611207 90..495 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:52:09 Download gff for BO10832.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19603363..19603656 626..919 99 <- Minus
arm_3L 19603715..19603844 496..625 100 <- Minus
arm_3L 19603902..19604307 90..495 100 <- Minus
arm_3L 19604425..19604511 4..89 94   Minus

BO10832.complete Sequence

2530 bp (2530 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631888

> BO10832.complete
GAAGTTATCAGTCGACATGGTTGTGGTGGCCCATCGTCGTATTCGTATAA
CAGGTCAGGTGGTAGAGGACGTGCCACCTCCTAAGCCCGCTGAAGATCAA
AGCACTGATCAAGCGGATGCGGCACCTATAAAATCAAGATCCGACCCAGC
CCGAAAGCCCCGTGGCCGAATTCCCAGGAGTCGGACCGGAAAATCACGTG
AATCGGCGGCTGCTGAAGAACTTATACAAAACCAGACTCTGGAGCCGCCA
CTGAAATCAGGCAAAGTCGAGTCATCGAGCTTGCCAAAGCCTCCAACAGA
AGAAAAGATAGTGGAACCTGAGACTGGTGCCAAAGAAAATGTTAATCAAT
CTGCGCCCAGCGCCCAACCTGTTCTTATTGTTGAAGTGGAGAACGTAAAG
CAACCGATCTATAAACAAACGGAAGAGGTGAAGGCATTAACTCAGGAGAT
AATCAAGACTCTTCGGGACATAATCACAATGAATCCCTTGTATAGAGAGA
GTCTACAGCAGATGCTGCACCAAAATCAACGAGTTGTCGACAACCCCATT
TATCTGTGCGATTTAGGAGCATCCCTTTCCGCTGGAGAACCAGCTGAGCT
GCAAAAAATTCTTGAGGAAACAGATATCCCAGAACGTCTACAATTGGCCT
TAACTTTACTCAAAAAGGAGTTGGAACTCTCCAGGCTCCAACAAAAAATT
GGACGCGAAGTAGAGGAAAAAGTCAAGCAGCAACATCGCAAATATATACT
CCAGGAACAGTTGAAAGTCATCAAAAAAGAACTGGGCATCGAAAAAGACG
ACAAGGATGCCATTGGTGAAAAGTACCGCGAAAAGCTGAAGGATAAGGTG
GTTCCCGAAGCTATTATGACGGTTATTGATGAAGAACTCACCAAGCTGAA
CTTCCTGGAGAGTCATAGTTCCGAGTTTAATGTAACTCGCAATTACCTCG
ACTGGCTTACTTCCCTACCTTGGGGCGTTATCAGCACCGAAAATCTCTGC
CTGGAGAAGGCCACTGAAACACTAAACGACGATCACTACGGAATGGAGGA
TATCAAGAAGCGTATTTTAGAATTTATTGCCGTCAGTTCCCTCAAGGGCT
CTACGCAGGGCAAGATCTTGTGCTTTCATGGACCCCCTGGTGTGGGCAAG
ACAAGCATAGCAAAGTCCATTGCACGCGCTTTGAATCGCGAGTACTTCCG
CTTTAGTGTGGGCGGCATGACAGACGTTGCTGAGATCAAGGGACATCGCC
GCACCTATGTGGGCGCAATGCCGGGTAAACTGATTCAGTGCCTGAAGAAG
ACTAAGATTGAAAATCCTCTGGTACTCATCGACGAGGTGGACAAGATCGG
CAAGGGCTACCAGGGAGATCCTAGCTCAGCATTGTTAGAGCTACTAGATC
CCGAGCAGAATGCGAATTTCCTGGACCACTACCTCGATGTGCCGGTAGAC
CTCTCGCGAGTGCTCTTCATCTGCACAGCTAATGTGATCGACACTATTCC
CGAGCCTTTAAGAGATCGCATGGAATTGATTGAGATGTCTGGGTATGTTG
CCGAAGAGAAGATCGCCATCGCTCGTCAGTATCTGATGCCACAAGCGATG
AAGGACTGTGGATTAACGGACAAGCATATCAACATTTCCGAGGATGCCCT
AAACATGCTGATTCGCAGTTATTGCCGGGAATCCGGGGTGCGAAACCTGC
AAAAGCATATCGAGAAAGTTATTCGCAAGGTGGCCTTCCGAGTGGTCAAA
AAAGAAGGCGAGCACTTTCCGGTTAACGCTGATAATCTGACCACATTCCT
GGGCAAACAAATCTTTAGCTCAGATCGCATGTACGCAACCACACCGGTGG
GTGTAGTCATGGGTCTGGCCTGGACCGCCATGGGTGGTTCATCGCTTTAC
ATCGAAACCTCAAGGCGTCACATTCGCCAGGGGGCAAAAACAGATCCGAA
CACTGTCGCCGGATCGCTGCACATCACCGGAAATTTGGGAGATGTCATGA
AGGAGTCGGCCCAAATAGCCTTAACGGTGGCGCGCAACTTTTTATATTCG
CTGGAACCCAATAATCTGTTCTTAGAGCAAGAGCACATTCACCTCCATGT
TCCTGAAGGTGCCACACCGAAAGATGGCCCCAGTGCGGGCATCACCATTA
TTACAGCTCTCGTATCGTTGGCCACTGGAAAGCCGGTGCGCCAAGATATC
GCTATGACGGGCGAAGTATCCCTGAAGGGAAAAGTGCTACCCGTGGGTGG
TATTAAGGAAAAGACGATTGCAGCACGTCGTAGTGGAGTGAATTGTCTTA
TTCTGCCTGTGGATAACAAGAAAGACTTCGAGGAGTTGCCCACGTACATT
ACAGATGGTCTGGAGGTTCACTTTGCCACCACCTACGAGGATGTCTACAA
GATAGCGTTTACTGATGTAACCGAAACGACAACCAACAATGTTGAAGAGC
AGGAGCCGCTGCAGAAGCTTTCCAGTGCGGCCGCTGCCAAATCGGAGACG
TGGCCTTATTCTGCAAGCTTTCTAGACCAT

BO10832.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:21:49
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RA 3021 CG8798-PA 522..3018 16..2512 12485 100 Plus
Lon-RC 3075 CG8798-PC 649..3072 89..2512 12120 100 Plus
Lon-RC 3075 CG8798-PC 522..595 16..89 370 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-RA 3707 CG8798-RA 639..3135 16..2512 12485 100 Plus
Lon-RC 3761 CG8798-RC 766..3189 89..2512 12120 100 Plus
Lon-RC 3761 CG8798-RC 639..712 16..89 370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:21:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19608980..19609709 2083..1354 3650 100 Minus
3L 28110227 3L 19609765..19610193 1354..926 2130 99.8 Minus
3L 28110227 3L 19610802..19611208 495..89 2035 100 Minus
3L 28110227 3L 19610252..19610556 930..626 1525 100 Minus
3L 28110227 3L 19608429..19608668 2512..2273 1200 100 Minus
3L 28110227 3L 19608731..19608921 2273..2083 955 100 Minus
3L 28110227 3L 19610615..19610746 625..494 660 100 Minus
3L 28110227 3L 19611325..19611398 89..16 370 100 Minus
Blast to na_te.dros performed 2014-11-27 20:21:48
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 3722..3797 384..459 128 63.2 Plus

BO10832.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:40 Download gff for BO10832.complete
Subject Subject Range Query Range Percent Splice Strand
CG8798-RA 509..3021 4..2513 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:13:50 Download gff for BO10832.complete
Subject Subject Range Query Range Percent Splice Strand
CG8798-RA 620..3136 4..2521 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:09:10 Download gff for BO10832.complete
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 640..3135 17..2514 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:41 Download gff for BO10832.complete
Subject Subject Range Query Range Percent Splice Strand
CG8798-RA 620..3136 4..2521 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:03 Download gff for BO10832.complete
Subject Subject Range Query Range Percent Splice Strand
Lon-RA 640..3135 17..2514 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:03 Download gff for BO10832.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19608427..19608668 2273..2514 99 <- Minus
3L 19608732..19608921 2083..2272 100 <- Minus
3L 19608981..19609709 1354..2082 100 <- Minus
3L 19609766..19610188 931..1353 100 <- Minus
3L 19610252..19610556 626..930 100 <- Minus
3L 19610615..19610744 496..625 100 <- Minus
3L 19610802..19611207 90..495 100 <- Minus
3L 19611325..19611397 17..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:09:10 Download gff for BO10832.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19601527..19601768 2273..2514 99 <- Minus
arm_3L 19601832..19602021 2083..2272 100 <- Minus
arm_3L 19602081..19602809 1354..2082 100 <- Minus
arm_3L 19602866..19603288 931..1353 100 <- Minus
arm_3L 19603352..19603656 626..930 100 <- Minus
arm_3L 19603715..19603844 496..625 100 <- Minus
arm_3L 19603902..19604307 90..495 100 <- Minus
arm_3L 19604425..19604497 17..89 100   Minus

BO10832.pep Sequence

Translation from 16 to 2530

> BO10832.pep
MVVVAHRRIRITGQVVEDVPPPKPAEDQSTDQADAAPIKSRSDPARKPRG
RIPRSRTGKSRESAAAEELIQNQTLEPPLKSGKVESSSLPKPPTEEKIVE
PETGAKENVNQSAPSAQPVLIVEVENVKQPIYKQTEEVKALTQEIIKTLR
DIITMNPLYRESLQQMLHQNQRVVDNPIYLCDLGASLSAGEPAELQKILE
ETDIPERLQLALTLLKKELELSRLQQKIGREVEEKVKQQHRKYILQEQLK
VIKKELGIEKDDKDAIGEKYREKLKDKVVPEAIMTVIDEELTKLNFLESH
SSEFNVTRNYLDWLTSLPWGVISTENLCLEKATETLNDDHYGMEDIKKRI
LEFIAVSSLKGSTQGKILCFHGPPGVGKTSIAKSIARALNREYFRFSVGG
MTDVAEIKGHRRTYVGAMPGKLIQCLKKTKIENPLVLIDEVDKIGKGYQG
DPSSALLELLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRD
RMELIEMSGYVAEEKIAIARQYLMPQAMKDCGLTDKHINISEDALNMLIR
SYCRESGVRNLQKHIEKVIRKVAFRVVKKEGEHFPVNADNLTTFLGKQIF
SSDRMYATTPVGVVMGLAWTAMGGSSLYIETSRRHIRQGAKTDPNTVAGS
LHITGNLGDVMKESAQIALTVARNFLYSLEPNNLFLEQEHIHLHVPEGAT
PKDGPSAGITIITALVSLATGKPVRQDIAMTGEVSLKGKVLPVGGIKEKT
IAARRSGVNCLILPVDNKKDFEELPTYITDGLEVHFATTYEDVYKIAFTD
VTETTTNNVEEQEPLQKLSSAAAAKSETWPYSASFLDH

BO10832.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:46:34
Subject Length Description Subject Range Query Range Score Percent Strand
Lon-PA 1006 CG8798-PA 175..1006 1..832 4231 100 Plus
Lon-PC 1024 CG8798-PC 175..1024 1..832 4202 97.9 Plus