Clone BO10837 Report

Search the DGRC for BO10837

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:108
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptDoa-RK
Protein status:BO10837.pep: validated not full length
Sequenced Size:2530

Clone Sequence Records

BO10837.3prime Sequence

806 bp (805 high quality bases) assembled on 2006-04-19

> BO10837.3prime
ATGGTCTAGAAAGCTTGCTCTGGAGAGGCTATGCGATCGTTCGCGGCTGC
TGCTGCCCGACGAAAGGGGCTGCTTGTTGCTGACCTCACCTACTCGATGG
TGTGGTGGCAGCCTATCAAAGAACGGATGATGCAGGGCCTCACCTAACGT
GATGCGTGACGACGGCTCGTACTCCAGCATCTTCTTGATCAGACTGAAGA
GCTCACAGTGGTCCTCGCTGTCGCTCAGCTGGCACAGGAACAACGGCTTG
CAGTGATCACGGACGTAGCGACCCGCACTGGACTTCTCATCCCAATCTAA
CTTACCATGATAGAAGTACTTTGTTTTGGTTTTGCTATAAAGAGTATGAT
TGCGTGCCATGCGATATGGTATTTGTCCCAAGATTCGCTCCATCATGGCC
AAGTGTTCGCGATTGTCGTGCGTTTGGAAGAGCGTGATTCCCAGATACAG
TTCGAACAAGATGCACCCAATGGACCAAACGTCACACGGCTGTGACCACC
CCAGCTCCAGTATGACCTCTGGCGCGCGGTAATGTCGCGTCGAGACAATT
GTGCTGTGGTGCTCGTGGTCGAAGGTGGCCGACCCGAAGTCGATTAGGCG
AACGTCCGTATTCTTGACGCGGCGCACCTCGCGGTTAATCTTATGATTAT
AGTGAGAAGTATAATCCGAGTCGACGAAGAGTATGTTCTCCGGCTTGAGA
TCTGTGTGCGTTAAACGATTGTCATGTAGAAATTTCACAGAGTAGCATAA
TTGATAGGCCATATGGCGCACTTGGTCCAGCGGGTATGGCTCATAGTTGT
TCTCTC

BO10837.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:11:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG33553-PC 2499 Doa-RC 1709..2496 806..19 3940 100 Minus
CG33553-PD 6192 Doa-RD 5402..6189 806..19 3940 100 Minus
CG33553-PA 1743 Doa-RA 971..1427 806..350 2285 100 Minus
CG33553-PE 2952 Doa-RE 2180..2636 806..350 2285 100 Minus
CG33553-PB 1536 Doa-RB 764..1220 806..350 2285 100 Minus
CG33553-PF 1743 Doa-RF 971..1427 806..350 2285 100 Minus
CG33553-PG 1950 Doa-RG 1178..1634 806..350 2285 100 Minus
CG33553-PA 1743 Doa-RA 1424..1740 335..19 1585 100 Minus
CG33553-PE 2952 Doa-RE 2633..2949 335..19 1585 100 Minus
CG33553-PB 1536 Doa-RB 1217..1533 335..19 1585 100 Minus
CG33553-PF 1743 Doa-RF 1424..1740 335..19 1585 100 Minus
CG33553-PG 1950 Doa-RG 1631..1947 335..19 1585 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:26:26
Subject Length Description Subject Range Query Range Score Percent Strand
Doa-RZ 3958 CG42320-RZ 2138..2925 806..19 3940 100 Minus
Doa-RY 5756 CG42320-RY 3936..4723 806..19 3940 100 Minus
Doa-RX 3967 CG42320-RX 2147..2934 806..19 3940 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28921340..28921551 353..142 1060 100 Minus
3R 32079331 3R 28920920..28921091 636..465 860 100 Minus
3R 32079331 3R 28920691..28920860 806..637 850 100 Minus
3R 32079331 3R 28921613..28921739 145..19 635 100 Minus
3R 32079331 3R 28921155..28921269 467..353 575 100 Minus
Blast to na_te.dros performed 2015-02-11 11:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6916..7012 159..252 118 59.8 Plus

BO10837.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:50:45 Download gff for BO10837.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1658-PC 1709..2499 16..806 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:08:21 Download gff for BO10837.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33553-PD 5402..6192 16..806 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:55:54 Download gff for BO10837.3prime
Subject Subject Range Query Range Percent Splice Strand
Doa-RX 2147..2934 19..806 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:40:04 Download gff for BO10837.3prime
Subject Subject Range Query Range Percent Splice Strand
Doa-RX 2147..2934 19..806 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:40:04 Download gff for BO10837.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 28920920..28921089 467..636 100 -> Minus
3R 28921156..28921269 353..466 100 -> Minus
3R 28921341..28921549 144..352 100 -> Minus
3R 28921615..28921739 19..143 100   Minus
3R 28920691..28920860 637..806 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:55:54 Download gff for BO10837.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24746413..24746582 637..806 100 -> Minus
arm_3R 24746642..24746811 467..636 100 -> Minus
arm_3R 24746878..24746991 353..466 100 -> Minus
arm_3R 24747063..24747271 144..352 100 -> Minus
arm_3R 24747337..24747461 19..143 100   Minus

BO10837.5prime Sequence

946 bp (849 high quality bases) assembled on 2006-04-19

> BO10837.5prime
GAAGTTATCAGTCGACATGGTGGCTGCCAATTTGGAGGTGCCAACATCGT
CATCGTCATCAGCGGCCACAAAGCGCCAGAAAGATGTTGACAACAAGCTA
GAAAAATGCTTGAACGACATGCTAAAGTTGAAGACCAGCAGCAACAACAA
CAGCACTAGTAACAGCAATAATAATGCAATCATGTCGCATTCGCTGACGG
GCGAGCACAAAGACCCGAAGACTGCACTCGAAGGCCCCACGAGCAGCAGC
AGCAGCAGCAGCAGCAAGTACATAGGTGAATCTCAGATCCCCGTGCCAGT
TCAGCTGTACGATCCGCAGAAGCCGTTGCTGCAGCAACAGCAGCAGCAAC
AAAGGATCTGCTATCCCATAGGCAAATCTAACTCTACCTCTCAGCTACCC
ATGGGCGGCTATCAGCGATTGCTGCAACATCAGCAGCAACAACATCACCA
ACAGCAACAGCAGCAACATCAGGAACAGCAGCAGTATCCGCAGCACAAGC
GACCCTTCCTCAACTGGAATAGCTTTGCATGTTCCGCCATGAACGGAGCG
AGTGATCCCTTCATGCAGCAGCAACACATGCCTGCCCACCAGCAACAGCA
GCATCTGCCACACAAGCTGCAGCAATCATACTCCTCGTCTCATGTGCCCA
AGCAGGCGCCCAAATCGGGACTGGCCATGTTTCTGCAGAAGAACACCAAC
AAGGAGAACAAGTTTGGCCAGCCGATGCAGCAGCAGCCACCCGGCATGAT
GCCCCAGATGTATGGATACCAGGCGCCCCAGCAGCAATCCAAGATAGGCT
ATCCCCGCACAGGTGCCCCACTGACGCACTCGGCCTCCTTCAGCTCCGCC
CAAAGGCCGACGGCCCTGCAGTTCCACAGCAACATCAGCAGCAGCAGCAT
CTGCAGCAACAGCAGCAACACCCCCAGCAGCAACAACATCAGCATT

BO10837.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG33553-PC 2499 Doa-RC 1..861 17..877 4305 100 Plus
CG33553-PD 6192 Doa-RD 3694..4554 17..877 4305 100 Plus
CG33553-PH 5115 Doa-RH 3640..4500 17..877 4305 100 Plus
CG33553-PC 2499 Doa-RC 862..931 877..946 350 100 Plus
CG33553-PD 6192 Doa-RD 4555..4624 877..946 350 100 Plus
CG33553-PH 5115 Doa-RH 4501..4570 877..946 350 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
Doa-RY 5756 CG42320-RY 2228..3158 17..946 4630 99.9 Plus
Doa-RP 7311 CG42320-RP 3783..4713 17..946 4630 99.9 Plus
Doa-RK 3693 CG42320-RK 165..1095 17..946 4630 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28909819..28910749 17..946 4605 99.9 Plus
Blast to na_te.dros performed 2015-02-11 14:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2329..2792 134..625 347 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2998 220..938 333 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2950 302..944 326 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2301..2854 394..944 301 54.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..7018 427..720 299 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2487..2958 42..503 279 56.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6470..6902 57..497 277 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2635..3025 134..524 252 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6740..6944 302..514 246 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7053 137..483 226 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2944 42..630 216 53.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6951 242..495 204 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2656 587..944 202 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6545..6859 42..352 195 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6892 439..625 187 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6894 134..272 176 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6952 238..463 175 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..7009 134..363 167 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2666 566..918 160 54.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2380..2518 131..272 152 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6871 456..625 151 60.6 Plus
roo 9092 roo DM_ROO 9092bp 1099..1161 121..182 150 73 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6871 42..174 145 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6859 565..625 143 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2290..2527 22..272 143 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2336..2396 565..625 143 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2357..2420 565..625 142 71.9 Plus
roo 9092 roo DM_ROO 9092bp 961..1150 142..352 139 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..7112 565..934 137 53.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6780 566..624 133 69.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6778..6841 565..625 133 70.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1555..1599 134..178 126 75.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6796 565..625 125 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2804..2838 132..166 121 82.9 Plus
roo 9092 roo DM_ROO 9092bp 1071..1114 137..179 118 77.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6703..6846 23..170 117 59.9 Plus
roo 9092 roo DM_ROO 9092bp 1067..1116 302..351 115 70 Plus
roo 9092 roo DM_ROO 9092bp 1086..1126 312..352 115 75.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 5633..5692 571..630 111 65 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1542..1594 302..353 109 69.8 Plus
roo 9092 roo DM_ROO 9092bp 1093..1150 565..625 109 67.2 Plus

BO10837.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:50:46 Download gff for BO10837.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1658-PC 1..931 17..946 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:08:22 Download gff for BO10837.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33553-PH 3635..4570 13..946 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:01:11 Download gff for BO10837.5prime
Subject Subject Range Query Range Percent Splice Strand
Doa-RK 160..1095 13..946 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:09:19 Download gff for BO10837.5prime
Subject Subject Range Query Range Percent Splice Strand
Doa-RK 160..1095 13..946 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:09:19 Download gff for BO10837.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 28909814..28910749 13..946 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:01:11 Download gff for BO10837.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24735536..24736471 13..946 99   Plus

BO10837.complete Sequence

2530 bp (2530 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631891

> BO10837.complete
GAAGTTATCAGTCGACATGGTGGCTGCCAATTTGGAGGTGCCAACATCGT
CATCGTCATCAGCGGCCACAAAGCGCCAGAAAGATGTTGACAACAAGCTA
GAAAAATGCTTGAACGACATGCTAAAGTTGAAGACCAGCAGCAACAACAA
CAGCACTAGTAACAGCAATAATAATGCAATCATGTCGCATTCGCTGACGG
GCGAGCACAAAGACCCGAAGACTGCACTCGAAGGCCCCACGAGCAGCAGC
AGCAGCAGCAGCAGCAAGTACATAGGTGAATCTCAGATCCCCGTGCCAGT
TCAGCTGTACGATCCGCAGAAGCCGTTGCTGCAGCAACAGCAGCAGCAAC
AAAGGATCTGCTATCCCATAGGCAAATCTAACTCTACCTCTCAGCTACCC
ATGGGCGGCTATCAGCGATTGCTGCAACATCAGCAGCAACAACATCACCA
ACAGCAACAGCAGCAACATCAGGAACAGCAGCAGTATCCGCAGCACAAGC
GACCCTTCCTCAACTGGAATAGCTTTGCATGTTCCGCCATGAACGGAGCG
AGTGATCCCTTCATGCAGCAGCAACACATGCCTGCCCACCAGCAACAGCA
GCATCTGCCACACAAGCTGCAGCAATCATACTCCTCGTCTCATGTGCCCA
AGCAGGCGCCCAAATCGGGACTGGCCATGTTTCTGCAGAAGAACACCAAC
AAGGAGAACAAGTTTGGCCAGCCGATGCAGCAGCAGCCACCCGGCATGAT
GCCCCAGATGTATGGATACCAGGCGCCCCAGCAGCAATCCAAGATAGGCT
ATCCCCGCACAGGTGCCCCACTGACGCACTCGGCCTCCTTCAGCTCCGCC
CAAAGGCCGACGGCCCTGCAGTTCCACCAGCAACATCAGCAGCAGCAGCA
TCTGCAGCAACAGCAGCAACACCCCCAGCAGCAACAACATCAGCATTCCA
GCTTTGGGGTGGGCATGATGAGTAGGAATTACTATAATATGCCCAAGCAG
CCCGAGCGCAAGCCGCTGCAGACCTTTGATCCGTATGCCTATCCCAAGCC
GAATCAGATGCAGCCGGTCAAGTACCAGCAGCAGCAACAGCATCCGCATA
CGCAGTTTCAGAATGCTTCCGCTGGAGGAGGCGGTGGCGGTGCTGCTGGG
CTTCAATACGATCCAAATACAAATACGCAATTGTTTTACGCGTCGCCGGC
GTCATCGTCATCGAACAAGCAACCGCAACAACCGCAACAGCAACAGCAGC
AGCAGCAGTCCCAGCTACAACAAAGCAATTCTGTCATATTCAATCACTCG
GGCCAGCAACACCAACCACATCAACAGCAGCAGAATGAAATGTCCAAGTC
CGCATTGGGGCTGCACTTCATCGAGACAGCAAAGCCCGTCATTCAAGATG
ATGCTGATGGTCACTTAATTTACCACACCGGAGACATTCTCCATCACAGA
TATAAGATCATGGCCACACTGGGCGAGGGAACTTTTGGACGTGTGGTCAA
GGTCAAAGATATGGAGCGTGATTACTGCATGGCTTTAAAGATTATTAAGA
ACGTGGAAAAGTACCGCGAAGCTGCCAAGCTGGAAATAAATGCTTTGGAA
AAGATTGCCCAAAAGGATCCGCATTGTGATCATTTGTGCGTCAAAATGAT
TGACTGGTTTGATTATCATGGACACATGTGTATAGTTTTTGAAATGTTGG
GGCTCAGTGTTTTCGATTTTTTGCGAGAGAACAACTATGAGCCATACCCG
CTGGACCAAGTGCGCCATATGGCCTATCAATTATGCTACTCTGTGAAATT
TCTACATGACAATCGTTTAACGCACACAGATCTCAAGCCGGAGAACATAC
TCTTCGTCGACTCGGATTATACTTCTCACTATAATCATAAGATTAACCGC
GAGGTGCGCCGCGTCAAGAATACGGACGTTCGCCTAATCGACTTCGGGTC
GGCCACCTTCGACCACGAGCACCACAGCACAATTGTCTCGACGCGACATT
ACCGCGCGCCAGAGGTCATACTGGAGCTGGGGTGGTCACAGCCGTGTGAC
GTTTGGTCCATTGGGTGCATCTTGTTCGAACTGTATCTGGGAATCACGCT
CTTCCAAACGCACGACAATCGCGAACACTTGGCCATGATGGAGCGAATCT
TGGGACAAATACCATATCGCATGGCACGCAATCATACTCTTTATAGCAAA
ACCAAAACAAAGTACTTCTATCATGGTAAGTTAGATTGGGATGAGAAGTC
CAGTGCGGGTCGCTACGTCCGTGATCACTGCAAGCCGTTGTTCCTGTGCC
AGCTGAGCGACAGCGAGGACCACTGTGAGCTCTTCAGTCTGATCAAGAAG
ATGCTGGAGTACGAGCCGTCGTCACGCATCACGTTAGGTGAGGCCCTGCA
TCATCCGTTCTTTGATAGGCTGCCACCACACCATCGAGTAGGTGAGGTCA
GCAACAAGCAGCCCCTTTCGTCGGGCAGCAGCAGCCGCGAACGATCGCAT
AGCCTCTCCAGAGCAAGCTTTCTAGACCAT

BO10837.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:30:13
Subject Length Description Subject Range Query Range Score Percent Strand
Doa-RY 4608 CG42320-PY 2110..4605 17..2512 12480 100 Plus
Doa-RP 6138 CG42320-PP 3640..6135 17..2512 12480 100 Plus
Doa-RK 2499 CG42320-PK 1..2496 17..2512 12480 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:30:15
Subject Length Description Subject Range Query Range Score Percent Strand
Doa-RY 5756 CG42320-RY 2228..4723 17..2512 12480 100 Plus
Doa-RP 7311 CG42320-RP 3783..6278 17..2512 12480 100 Plus
Doa-RK 3693 CG42320-RK 165..2660 17..2512 12480 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:30:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28909819..28911177 17..1375 6795 100 Plus
3R 32079331 3R 28921340..28921551 2178..2389 1060 100 Plus
3R 32079331 3R 28920689..28920860 1723..1894 860 100 Plus
3R 32079331 3R 28920920..28921091 1895..2066 860 100 Plus
3R 32079331 3R 28921613..28921739 2386..2512 635 100 Plus
3R 32079331 3R 28920353..28920467 1518..1632 575 100 Plus
3R 32079331 3R 28921155..28921269 2064..2178 575 100 Plus
3R 32079331 3R 28920537..28920627 1633..1723 455 100 Plus
3R 32079331 3R 28919490..28919567 1374..1451 390 100 Plus
3R 32079331 3R 28920225..28920291 1452..1518 335 100 Plus
Blast to na_te.dros performed 2014-11-28 08:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2329..2792 134..625 347 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2990 302..946 337 54 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2301..2854 394..945 313 54.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..7018 427..720 299 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6470..6944 57..514 281 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2487..2958 42..503 279 56.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2987 885..1273 276 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2635..3025 134..524 252 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..7053 137..483 226 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2944 42..630 216 53.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2315..2435 1213..1336 215 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6951 242..495 204 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6545..6859 42..352 195 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6771..6885 1218..1335 195 65.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6892 439..625 187 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6717..7026 1040..1354 183 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6894 134..272 176 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6952 238..463 175 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6750..6861 1218..1332 171 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..7009 134..363 167 58.4 Plus
roo 9092 roo DM_ROO 9092bp 971..1150 1155..1339 157 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6819 1228..1335 156 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2380..2518 131..272 152 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6871 456..625 151 60.6 Plus
roo 9092 roo DM_ROO 9092bp 1099..1161 121..182 150 73 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6867..6921 1218..1272 149 74.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6871 42..174 145 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2290..2527 22..272 143 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2336..2396 565..625 143 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6799..6859 565..625 143 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2357..2420 565..625 142 71.9 Plus
roo 9092 roo DM_ROO 9092bp 961..1150 142..352 139 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1517..1602 1261..1347 134 68.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6780 566..624 133 69.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6778..6841 565..625 133 70.3 Plus
roo 9092 roo DM_ROO 9092bp 1083..1141 1047..1105 133 69.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2381 566..625 131 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..7112 565..935 131 53 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1555..1599 134..178 126 75.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6736..6796 565..625 125 67.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2804..2838 132..166 121 82.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6747..7016 1047..1328 120 54 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6916..7012 2372..2279 118 59.8 Minus
roo 9092 roo DM_ROO 9092bp 1071..1114 137..179 118 77.3 Plus
roo 9092 roo DM_ROO 9092bp 1067..1116 302..351 115 70 Plus
roo 9092 roo DM_ROO 9092bp 1086..1126 312..352 115 75.6 Plus

BO10837.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:42 Download gff for BO10837.complete
Subject Subject Range Query Range Percent Splice Strand
Doa-RP 3635..6138 13..2515 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:53:37 Download gff for BO10837.complete
Subject Subject Range Query Range Percent Splice Strand
Doa-RP 3640..6135 17..2514 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:05 Download gff for BO10837.complete
Subject Subject Range Query Range Percent Splice Strand
Doa-RK 165..2660 17..2514 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:42 Download gff for BO10837.complete
Subject Subject Range Query Range Percent Splice Strand
Doa-RP 3635..6135 13..2512 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:19:23 Download gff for BO10837.complete
Subject Subject Range Query Range Percent Splice Strand
Doa-RK 165..2660 17..2514 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:19:23 Download gff for BO10837.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28921615..28921739 2388..2514 98   Plus
3R 28921341..28921549 2179..2387 100 -> Plus
3R 28920690..28920860 1724..1894 100 -> Plus
3R 28920920..28921089 1895..2064 100 -> Plus
3R 28921156..28921269 2065..2178 100 -> Plus
3R 28909819..28911177 17..1375 100 -> Plus
3R 28919492..28919567 1376..1451 100 -> Plus
3R 28920225..28920291 1452..1518 100 -> Plus
3R 28920354..28920467 1519..1632 100 -> Plus
3R 28920537..28920627 1633..1723 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:05 Download gff for BO10837.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24746412..24746582 1724..1894 100 -> Plus
arm_3R 24746642..24746811 1895..2064 100 -> Plus
arm_3R 24746878..24746991 2065..2178 100 -> Plus
arm_3R 24747063..24747271 2179..2387 100 -> Plus
arm_3R 24735541..24736899 17..1375 100 -> Plus
arm_3R 24745214..24745289 1376..1451 100 -> Plus
arm_3R 24745947..24746013 1452..1518 100 -> Plus
arm_3R 24746076..24746189 1519..1632 100 -> Plus
arm_3R 24746259..24746349 1633..1723 100 -> Plus
arm_3R 24747337..24747461 2388..2514 98   Plus

BO10837.pep Sequence

Translation from 16 to 2530

> BO10837.pep
MVAANLEVPTSSSSSAATKRQKDVDNKLEKCLNDMLKLKTSSNNNSTSNS
NNNAIMSHSLTGEHKDPKTALEGPTSSSSSSSSKYIGESQIPVPVQLYDP
QKPLLQQQQQQQRICYPIGKSNSTSQLPMGGYQRLLQHQQQQHHQQQQQQ
HQEQQQYPQHKRPFLNWNSFACSAMNGASDPFMQQQHMPAHQQQQHLPHK
LQQSYSSSHVPKQAPKSGLAMFLQKNTNKENKFGQPMQQQPPGMMPQMYG
YQAPQQQSKIGYPRTGAPLTHSASFSSAQRPTALQFHQQHQQQQHLQQQQ
QHPQQQQHQHSSFGVGMMSRNYYNMPKQPERKPLQTFDPYAYPKPNQMQP
VKYQQQQQHPHTQFQNASAGGGGGGAAGLQYDPNTNTQLFYASPASSSSN
KQPQQPQQQQQQQQSQLQQSNSVIFNHSGQQHQPHQQQQNEMSKSALGLH
FIETAKPVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDME
RDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDY
HGHMCIVFEMLGLSVFDFLRENNYEPYPLDQVRHMAYQLCYSVKFLHDNR
LTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDFGSATFDH
EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHD
NREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAGRY
VRDHCKPLFLCQLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFD
RLPPHHRVGEVSNKQPLSSGSSSRERSHSLSRASFLDH

BO10837.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
Doa-PY 1535 CG42320-PY 704..1535 1..832 4477 100 Plus
Doa-PP 2045 CG42320-PP 1214..2045 1..832 4477 100 Plus
Doa-PK 832 CG33553-PC 1..832 1..832 4477 100 Plus
Doa-PX 889 CG42320-PX 508..889 451..832 2067 99.2 Plus
Doa-PAA 398 CG42320-PAA 26..398 454..832 2009 98.4 Plus