Clone BO10847 Report

Search the DGRC for BO10847

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:108
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG31643-RA
Protein status:BO10847.pep: validated full length
Sequenced Size:2731

Clone Sequence Records

BO10847.3prime Sequence

888 bp (812 high quality bases) assembled on 2006-04-19

> BO10847.3prime
ATGGTCTAGAAAGCTTGCATGTGAAATTTGTAACAAGCATTTAAGGTAGT
TGGCCTTGGCTGTTGATGACGCCATATACTTGGAGTTCCAGTCGTGCTCG
TTGATCTGCATCACTTTGTAGCCCATCATCTCTAGATGTCGCATCTTCAA
AGATTCAGGACCCCGCAATGCAGTCAGATCGTTTTCACAAAAAGAGTCGA
GCTTGAGCAGTAGTATTGCCACTTTGGTTATGCGATCCAACATGGTTGCC
TCCACGGGAGGTGCTGGGATGGGATTTTTATCCCGATCGAAATGTATCAC
AAAGTCTATTTGGTAGCCGTAGGGTGTAGTGTGGTTGCAGCGGAAATGCT
TGTCATTTTGAAGAAGCTGATGCAGCAGCTGCTTCACCTCTGTTGTGGAC
TCACTGGGTATTAAGGATTTTTTGCTGATCTGCGCCTCGATGTAGTTTTG
TTGAAACCAGGGCACATTCGCCTCGGGAAAGTCCAGGCATACTGTGCGAT
TCAGTTGCATAACCAGGTTAAGGACCCTCTCCGGATACGTTGCTTTTGAG
TAGCATACTTGTATCTCATCCTCGATTCGCTGAATGAATTTCACGCAGAA
TACTTGATTGATTAGCTGCTCTGGTATTGATTTGTAAAAGCACAGTGCTA
GACAAGCCTGGACAACCGATAAACCGCTCATCTGGTCAAAATCTCTTAGC
AGTACTTCGGAGGCGTGGTTTAGAGCCTCCACGGACGCTGGCATGTAGCC
CAAATTATACGAGCAGGTCAACACTTTCTCCACTGTGTCGCCGGAAACGT
GATCATGCTGTTCGGAAATGTAGGCGAACATGGACTCCAGGAGCTCGGGA
ACAAAGAAATTCGAAGCGTTGAAGTTGTAGGCCATGTC

BO10847.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31643-PA 2700 CG31643-RA 1828..2697 888..19 4350 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:46:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG31643-RB 2842 CG31643-RB 1914..2783 888..19 4350 100 Minus
CG31643-RA 2938 CG31643-RA 1914..2783 888..19 4350 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6040337..6040613 696..420 1385 100 Minus
2L 23513712 2L 6040924..6041128 223..19 1025 100 Minus
2L 23513712 2L 6040669..6040864 419..224 980 100 Minus
2L 23513712 2L 6040094..6040287 888..695 970 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:46:09 has no hits.

BO10847.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:04 Download gff for BO10847.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-PA 1828..2700 18..888 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:08:47 Download gff for BO10847.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-PA 1828..2700 18..888 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:49:53 Download gff for BO10847.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 1870..2747 9..888 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:12:59 Download gff for BO10847.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 1914..2791 9..888 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:12:59 Download gff for BO10847.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6040094..6040287 695..888 100 -> Minus
2L 6040339..6040613 420..694 100 -> Minus
2L 6040669..6040864 224..419 100 -> Minus
2L 6040924..6041136 9..223 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:49:53 Download gff for BO10847.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6040094..6040287 695..888 100 -> Minus
arm_2L 6040339..6040613 420..694 100 -> Minus
arm_2L 6040669..6040864 224..419 100 -> Minus
arm_2L 6040924..6041136 9..223 98   Minus

BO10847.5prime Sequence

918 bp (830 high quality bases) assembled on 2006-04-19

> BO10847.5prime
GAAGTTATCAGTCGACATGTATCTGAACCACCTGCCGCGGACACAATGGA
AGTACCTACAATACCTTCTGCGAGTGCGTCAGCTTCAGCTCCTGCGACGG
CACGTTAACATTGGCGCAAAGCCGCCCATCCAAACAGCTGCCTTGCTGCC
GGCATTGGGCCAAAAACTGAGGAAGCACTCGCAGCTGGTGAACGGAGATC
TCCAAGACAAGTTTGGCGTGCCACGGGAACAGGATGCTCTTCTAACCCGA
CTGGAGGAGGCCAAGACGGGTAACCAGATTTTAGATGTGTTGGAGAGCTG
TGACGGCCTGCAGAGCTCCCATGTGGTGATGGGAATCTCACTGCTGTGGA
ACATCTATCACGACGCGGAGCAGGCAAGTAAAGATGCCATCACGGATCGC
GTGCTGCTTAACGTGCTCCCAAAGTTGGCCCCTTATGTACACCAACTGGA
GATCGATGATCTCAGTAGATGCTACCTGTACCTGCGCAAAATGCATATAC
CAAACTCCGAGGCAGTCGTGGAGGCCGTGCTGACGAGATCTCTTCAATTA
ATCGAGTCACAAGTTGATGACGAAGTCATTCCCTTGACCTCCTTGTCTCG
CCTCTCGGTGGGCATCAACTTGGAACGCGACTTCTTCACTCCGCTTGTGT
GTAGGAACTTTATTCCGCACCTGGAACATCACATCAATTGGTGTCGCAGC
GCAGAGCAGGTTCGCCTTCTGTCCACGTGCCTCTTTCAGCTACACTTTCT
CATTGATGAGGAGCTGTTTACGCGCTTCAAGTTGCGCTTGACTGAAATGA
TGCAAAGCGGCGTCCTCAGCAGCGAAACCCCTAAGGCTCTTCTGAAGGTG
ATCCACATGCTGAATATTCCAGTGTGGTCGCAGACCCACACCCAATTGAT
TCGGGAGGTCATGCTGGT

BO10847.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:11:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG31643-PA 2700 CG31643-RA 1..902 17..918 4510 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31643-RB 2842 CG31643-RB 86..988 16..918 4515 100 Plus
CG31643-RA 2938 CG31643-RA 86..988 16..918 4515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6038202..6039104 16..918 4515 100 Plus
Blast to na_te.dros performed on 2015-02-11 12:22:17 has no hits.

BO10847.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:05 Download gff for BO10847.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-PA 1..902 17..918 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:08:48 Download gff for BO10847.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-PA 1..902 17..918 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 16:29:56 Download gff for BO10847.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 31..944 3..918 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:36:42 Download gff for BO10847.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 75..988 3..918 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:36:42 Download gff for BO10847.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6038191..6039104 3..918 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 16:29:56 Download gff for BO10847.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6038191..6039104 3..918 99   Plus

BO10847.complete Sequence

2731 bp (2731 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631895

> BO10847.complete
GAAGTTATCAGTCGACATGTATCTGAACCACCTGCCGCGGACACAATGGA
AGTACCTACAATACCTTCTGCGAGTGCGTCAGCTTCAGCTCCTGCGACGG
CACGTTAACATTGGCGCAAAGCCGCCCATCCAAACAGCTGCCTTGCTGCC
GGCATTGGGCCAAAAACTGAGGAAGCACTCGCAGCTGGTGAACGGAGATC
TCCAAGACAAGTTTGGCGTGCCACGGGAACAGGATGCTCTTCTAACCCGA
CTGGAGGAGGCCAAGACGGGTAACCAGATTTTAGATGTGTTGGAGAGCTG
TGACGGCCTGCAGAGCTCCCATGTGGTGATGGGAATCTCACTGCTGTGGA
ACATCTATCACGACGCGGAGCAGGCAAGTAAAGATGCCATCACGGATCGC
GTGCTGCTTAACGTGCTCCCAAAGTTGGCCCCTTATGTACACCAACTGGA
GATCGATGATCTCAGTAGATGCTACCTGTACCTGCGCAAAATGCATATAC
CAAACTCCGAGGCAGTCGTGGAGGCCGTGCTGACGAGATCTCTTCAATTA
ATCGAGTCACAAGTTGATGACGAAGTCATTCCCTTGACCTCCTTGTCTCG
CCTCTCGGTGGGCATCAACTTGGAACGCGACTTCTTCACTCCGCTTGTGT
GTAGGAACTTTATTCCGCACCTGGAACATCACATCAATTGGTGTCGCAGC
GCAGAGCAGGTTCGCCTTCTGTCCACGTGCCTCTTTCAGCTACACTTTCT
CATTGATGAGGAGCTGTTTACGCGCTTCAAGTTGCGCTTGACTGAAATGA
TGCAAAGCGGCGTCCTCAGCAGCGAAACCCCTAAGGCTCTTCTGAAGGTG
ATCCACATGCTGAATATTCCAGTGTGGTCGCAGACCCACACCCAATTGAT
TCGGGAGGTCATGCTGGTCTTGCGACCTTGCATACACCAGATGGAGTCTG
CAGATCTAAAGAGCATTTGTCGCACATTTTTGCATCATCAAGAACCCGCC
GCACTGATAGAGCCGCTCAAGAAAGCCCTTGAAAAGTTACTACAGGAAGA
AGGCACTGCTGACGCCCTGTTTTGTGCAGTTCCCTTTGCAACGCCACTGC
AGAGAGACCAGTATCTGCATCAGTTTAAGGAACTGCTCTACTCCGAAGAG
GCCTGGCAGCAACCCAATGCGAGCGGACATTTATTCAGCGTTCTGCGTGC
ACTAAAAGTCTCCGACATTGAATTCTGCAACACATACTGGTCAGGAGTTG
TAAAAGAGCTGGAGTCCTGTCCGGAAAAGCATTTGCACCTACGGTTCCTG
AGACACTGTCAACGCTATATGAACTTTAATAACAATCTGGGAGGAACCTA
CCGTCACTTAGAACTGGAACGAAAGCTAAGTCGCATGTGCATGAATGCTA
TTGAGCATGACATAGCGGGAAGGCTGCCAGCGAAGTTCGCACGACTTGCA
TCCTTTGTGCTAGCTTACGGGCAGACTCCGTTGGCCTGGAAGAAATTTCC
CAACTTTTTGTTAAGCAAAATGCTCGCAATGGCGCCCCAGCTTGGCATTC
AGGATTGCTTTCTCCTCAGTCGCGGCATGCAAATAGCCAGCGAACTAAGG
TTTCGCCAGCATCTTCCGGCATTAGCTGGCATGCAACTGTCCACAATGGA
CAGCATTCTCATCGGTTGTGCGGAGAGGCACTTGAGAGATGCCGAAAAGG
ACCCTCTAAATGCCAGCGAATTGAGCATGATTGTCAGAACACTCAGTCAT
CGCAAGAAGCTAAAGAATACGGTGGTTTACAACCAGGCCCTGGCGCAGTA
CAAAAATCTGCACTGCAACGATCTCAATTCTCGGGTGGTTCGGGACATGG
CCTACAACTTCAACGCTTCGAATTTCTTTGTTCCCGAGCTCCTGGAGTCC
ATGTTCGCCTACATTTCCGAACAGCATGATCACGTTTCCGGCGACACAGT
GGAGAAAGTGTTGACCTGCTCGTATAATTTGGGCTACATGCCAGCGTCCG
TGGAGGCTCTAAACCACGCCTCCGAAGTACTGCTAAGAGATTTTGACCAG
ATGAGCGGTTTATCGGTTGTCCAGGCTTGTCTAGCACTGTGCTTTTACAA
ATCAATACCAGAGCAGCTAATCAATCAAGTATTCTGCGTGAAATTCATTC
AGCGAATCGAGGATGAGATACAAGTATGCTACTCAAAAGCAACGTATCCG
GAGAGGGTCCTTAACCTGGTTATGCAACTGAATCGCACAGTATGCCTGGA
CTTTCCCGAGGCGAATGTGCCCTGGTTTCAACAAAACTACATCGAGGCGC
AGATCAGCAAAAAATCCTTAATACCCAGTGAGTCCACAACAGAGGTGAAG
CAGCTGCTGCATCAGCTTCTTCAAAATGACAAGCATTTCCGCTGCAACCA
CACTACACCCTACGGCTACCAAATAGACTTTGTGATACATTTCGATCGGG
ATAAAAATCCCATCCCAGCACCTCCCGTGGAGGCAACCATGTTGGATCGC
ATAACCAAAGTGGCAATACTACTGCTCAAGCTCGACTCTTTTTGTGAAAA
CGATCTGACTGCATTGCGGGGTCCTGAATCTTTGAAGATGCGACATCTAG
AGATGATGGGCTACAAAGTGATGCAGATCAACGAGCACGACTGGAACTCC
AAGTATATGGCGTCATCAACAGCCAAGGCCAACTACCTTAAATGCTTGTT
ACAAATTTCACATGCAAGCTTTCTAGACCAT

BO10847.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:05:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG31643-RB 2700 CG31643-PB 1..2697 17..2713 13485 100 Plus
CG31643-RA 2700 CG31643-PA 1..2697 17..2713 13485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:05:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31643-RB 2842 CG31643-RB 86..2783 16..2713 13490 100 Plus
CG31643-RA 2938 CG31643-RA 86..2783 16..2713 13490 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:05:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6038202..6039943 16..1757 8710 100 Plus
2L 23513712 2L 6040008..6040287 1758..2037 1400 100 Plus
2L 23513712 2L 6040337..6040613 2036..2312 1385 100 Plus
2L 23513712 2L 6040924..6041128 2509..2713 1025 100 Plus
2L 23513712 2L 6040669..6040864 2313..2508 980 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:05:48 has no hits.

BO10847.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:30 Download gff for BO10847.complete
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 1..2700 17..2714 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:13:39 Download gff for BO10847.complete
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 31..2747 3..2723 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:03 Download gff for BO10847.complete
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 43..2739 17..2715 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:30 Download gff for BO10847.complete
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 31..2747 3..2723 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:14:41 Download gff for BO10847.complete
Subject Subject Range Query Range Percent Splice Strand
CG31643-RA 87..2783 17..2715 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:14:41 Download gff for BO10847.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6038203..6039943 17..1757 100 -> Plus
2L 6040008..6040287 1758..2037 100 -> Plus
2L 6040339..6040613 2038..2312 100 -> Plus
2L 6040669..6040864 2313..2508 100 -> Plus
2L 6040924..6041128 2509..2715 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:03 Download gff for BO10847.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6040339..6040613 2038..2312 100 -> Plus
arm_2L 6038203..6039943 17..1757 100 -> Plus
arm_2L 6040008..6040287 1758..2037 100 -> Plus
arm_2L 6040669..6040864 2313..2508 100 -> Plus
arm_2L 6040924..6041128 2509..2715 99   Plus

BO10847.pep Sequence

Translation from 16 to 2731

> BO10847.pep
MYLNHLPRTQWKYLQYLLRVRQLQLLRRHVNIGAKPPIQTAALLPALGQK
LRKHSQLVNGDLQDKFGVPREQDALLTRLEEAKTGNQILDVLESCDGLQS
SHVVMGISLLWNIYHDAEQASKDAITDRVLLNVLPKLAPYVHQLEIDDLS
RCYLYLRKMHIPNSEAVVEAVLTRSLQLIESQVDDEVIPLTSLSRLSVGI
NLERDFFTPLVCRNFIPHLEHHINWCRSAEQVRLLSTCLFQLHFLIDEEL
FTRFKLRLTEMMQSGVLSSETPKALLKVIHMLNIPVWSQTHTQLIREVML
VLRPCIHQMESADLKSICRTFLHHQEPAALIEPLKKALEKLLQEEGTADA
LFCAVPFATPLQRDQYLHQFKELLYSEEAWQQPNASGHLFSVLRALKVSD
IEFCNTYWSGVVKELESCPEKHLHLRFLRHCQRYMNFNNNLGGTYRHLEL
ERKLSRMCMNAIEHDIAGRLPAKFARLASFVLAYGQTPLAWKKFPNFLLS
KMLAMAPQLGIQDCFLLSRGMQIASELRFRQHLPALAGMQLSTMDSILIG
CAERHLRDAEKDPLNASELSMIVRTLSHRKKLKNTVVYNQALAQYKNLHC
NDLNSRVVRDMAYNFNASNFFVPELLESMFAYISEQHDHVSGDTVEKVLT
CSYNLGYMPASVEALNHASEVLLRDFDQMSGLSVVQACLALCFYKSIPEQ
LINQVFCVKFIQRIEDEIQVCYSKATYPERVLNLVMQLNRTVCLDFPEAN
VPWFQQNYIEAQISKKSLIPSESTTEVKQLLHQLLQNDKHFRCNHTTPYG
YQIDFVIHFDRDKNPIPAPPVEATMLDRITKVAILLLKLDSFCENDLTAL
RGPESLKMRHLEMMGYKVMQINEHDWNSKYMASSTAKANYLKCLLQISHA
SFLDH

BO10847.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:47:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG31643-PB 899 CG31643-PB 1..899 1..899 4684 100 Plus
CG31643-PA 899 CG31643-PA 1..899 1..899 4684 100 Plus