Clone BO10863 Report

Search the DGRC for BO10863

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:108
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG10702-RA
Protein status:BO10863.pep:
Sequenced Size:2872

Clone Sequence Records

BO10863.5prime Sequence

881 bp (795 high quality bases) assembled on 2006-04-19

> BO10863.5prime
GAAGTTATCAGTCGACATGCACTGCGGCAACATGCTGCTGGGCGTTGGCC
TCATGTTCCTGGCGCTATATGTCCCCTGCGCCGAATCCAAAAAGGAGCAC
GAGTGCACCAGCATCGACATCCGAAACGAGTGCAAGAACATGCATCTGCT
GGACAACTGCACCGTTGTCACCGGATACGTGATGATCACGCTGATCACTA
TCGAGCAGCGCTGCAATTTCTCGGAGTACTCGTACCCACTGCTCACCGAA
ATCACCGAGTTCATGATCTTCACCGACGTGCGCGGCCTGGTCAACATCAC
CGAAATGTTCCCGCACCTGACCGTCATTCGGGGTCGCCGGCTGTTCCTTA
ACTACGCGCTCGGAGTGACCAACATGCACGAGCTGGAACAGTTGGTATTT
CCCAAATTGGTGGCAATACAACGAGGACAAGTCTACATCGGCAGCTGCCC
CAAGCTCTGCAGCATCGGCCGTGTTAATTGGGATCTGCTGACTCTCACCA
GAGGCGAGAACAACATAATAATGGTGAATAAAAACTGCAGCACACCGGTT
TGCTCTGGATGCAGTTCCTCCCACTGCTGGTCGAATCATTACTGCCAAAG
ATCCATCAACGAAAATGTCGCCAATCCAAAGGCCAACATAAACGCCTGCC
ATGAGGAGTGCTTGGGCGGCTGCAAGAACAACTCATCATCCCCAGCTGAC
TGCAGCGTTTGCCGCGGACTCAGTGATGATGGTGTCTGCGTGAAGAGCTG
TCCGAAGGACAAGTACGTCATGGAGAACTATCAGCGCTGCTATACGAAGG
CCGAGTGTGTGCTAAAGCACGGCTATGTTATTTCCGGATCACAGTGCGTA
GCTTTCTGTCCCAGCGGCTACAAGACGAACA

BO10863.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG10702-PB 2841 CG10702-RB 1..865 17..881 4325 100 Plus
CG10702-PA 2841 CG10702-RA 1..865 17..881 4325 100 Plus
CG10702-PC 2841 CG10702-RC 1..865 17..881 4325 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:35:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG10702-RD 4041 CG10702-RD 729..1595 15..881 4335 100 Plus
CG10702-RC 3893 CG10702-RC 1021..1887 15..881 4335 100 Plus
CG10702-RA 3934 CG10702-RA 1062..1928 15..881 4335 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19068203..19068579 391..15 1885 100 Minus
2L 23513712 2L 19067782..19068026 633..389 1225 100 Minus
2L 23513712 2L 19067570..19067700 764..634 655 100 Minus
2L 23513712 2L 19067399..19067521 881..759 600 99.2 Minus
Blast to na_te.dros performed 2015-02-11 18:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy10 6006 gypsy10 GYPSY10 6006bp 1196..1225 90..119 114 86.7 Plus

BO10863.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:35 Download gff for BO10863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-PB 1..864 17..880 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:09:27 Download gff for BO10863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-PC 1..864 17..880 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 16:36:46 Download gff for BO10863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-RA 1062..1927 15..880 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 20:03:19 Download gff for BO10863.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-RA 1062..1927 15..880 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 20:03:19 Download gff for BO10863.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19067572..19067700 634..762 100 <- Minus
2L 19067782..19068023 392..633 100 <- Minus
2L 19067400..19067517 763..880 100 <- Minus
2L 19068203..19068579 15..391 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 16:36:46 Download gff for BO10863.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19067400..19067517 763..880 100 <- Minus
arm_2L 19067572..19067700 634..762 100 <- Minus
arm_2L 19067782..19068023 392..633 100 <- Minus
arm_2L 19068203..19068579 15..391 100   Minus

BO10863.3prime Sequence

845 bp (844 high quality bases) assembled on 2006-04-19

> BO10863.3prime
ATGGTCTAGAAAGCTTGCCATGGGATAATCGTCCGCCTGGCTGTTGTTGT
TGTTTTGAAATCGAACTGTCTCAAAACCGTCGACAAGGATTTCGCGATCC
TCGGTTTGTTGTCGGTCCCGAAGCCACTGCTCCCGCACTGGCACATATCG
CCGGAGTCCCGGCAACTTTCTCCAACATCGCCGCTTGTAAAGAACCCAAA
CCAGCGATACACTGCACCCAAACAGGAAGCAGATCAGGAATATGCTAATG
CCGCGGCCGTGTGACGCTGTGGCTGGCAAGTCTGTGATTTCTGGCGAAAG
ATCCTTGGCCTCCCTGCTGTGAAACGCCTGTAGGCGGTCCTCGTCGCTGC
ACAGGCTGATTGGCATGTAGGGCGTCATCACATCGCCGGCCAGGGAGTGG
ACCCGCACAGCGCACTCGGTGAAAGTGATGTTTATCTGCTTCACGTACAT
GTAGCCGGCACTCTGGTGATCCATCCGCGTTACACACCCGACGTGGGTTT
GCGAGAAGTTGTTGCGAAAGTGGATTACGTAGTTGGTCACCAGGCCATTG
GGCTTCTTAGGCTCCTCGAAGCGCATAATGTACTTGTCCATTTCCGGAAT
ATGGCAGGCATACAGTTGGGTGAGAAGATCGGCACCCATTGTATAGTTCG
TTCGTCCGTAGAGCGTTGTGTGGCTGCTGCATCCCAGTGGATTGCAGGCT
TGCAGCTGAAGCGCGTACAGGCGATAGCGATGCAGCGCCTTAAGCTCGTA
CTCCGTGGTGTTTCCCGGCAGCCGAAGCTGTGGAAGCGAGACCTCGGTAT
GTGCCAGTCGTCGGCACTGCTCGCGATCATCAAGGGTGCAGCGAT

BO10863.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG10702-PB 2841 CG10702-RB 2012..2838 845..19 4135 100 Minus
CG10702-PA 2841 CG10702-RA 2012..2838 845..19 4135 100 Minus
CG10702-PC 2841 CG10702-RC 2012..2838 845..19 4135 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG10702-RD 4041 CG10702-RD 2742..3568 845..19 4135 100 Minus
CG10702-RC 3893 CG10702-RC 3034..3860 845..19 4135 100 Minus
CG10702-RA 3934 CG10702-RA 3075..3901 845..19 4135 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:06:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19065305..19066131 19..845 4135 100 Plus
Blast to na_te.dros performed on 2015-02-10 22:06:40 has no hits.

BO10863.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:34 Download gff for BO10863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-PB 2012..2841 15..845 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:09:26 Download gff for BO10863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-PC 2012..2841 15..845 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:54:52 Download gff for BO10863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-RA 3075..3904 15..845 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:44 Download gff for BO10863.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10702-RA 3075..3904 15..845 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:44 Download gff for BO10863.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19065301..19066131 15..845 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:54:52 Download gff for BO10863.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19065301..19066131 15..845 99   Plus

BO10863.complete Sequence

2872 bp assembled on 2008-01-16

GenBank Submission: FJ631902

> BO10863.complete
GAAGTTATCAGTCGACATGCACTGCGGCAACATGCTGCTGGGCGTTGGCC
TCATGTTCCTGGCGCTATATGTCCCCTGCGCCGAATCCAAAAAGGAGCAC
GAGTGCACCAGCATCGACATCCGAAACGAGTGCAAGAACATGCATCTGCT
GGACAACTGCACCGTTGTCACCGGATACGTGATGATCACGCTGATCACTA
TCGAGCAGCGCTGCAATTTCTCGGAGTACTCGTACCCACTGCTCACCGAA
ATCACCGAGTTCATGATCTTCACCGACGTGCGCGGCCTGGTCAACATCAC
CGAAATGTTCCCGCACCTGACCGTCATTCGGGGTCGCCGGCTGTTCCTTA
ACTACGCGCTCGGAGTGACCAACATGCACGAGCTGGAACAGTTGGTATTT
CCCAAATTGGTGGCAATACAACGAGGACAAGTCTACATCGGCAGCTGCCC
CAAGCTCTGCAGCATCGGCCGTGTTAATTGGGATCTGCTGACTCTCACCA
GAGGCGAGAACAACATAATAATGGTGAATAAAAACTGCAGCACACCGGTT
TGCTCTGGATGCAGTTCCTCCCACTGCTGGTCGAATCATTACTGCCAAAG
ATCCATCAACGAAAATGTCGCCAATCCAAAGGCCAACATAAACGCCTGCC
ATGAGGAGTGCTTGGGCGGCTGCAAGAACAACTCATCATCCCCAGCTGAC
TGCAGCGTTTGCCGCGGACTCAGTGATGATGGTGTCTGCGTGAAGAGCTG
TCCGAAGGACAAGTACGTCATGGAGAACTATCAGCGCTGCTATACGAAGG
CCGAGTGTGTGCTAAAGCACGGCTATGTTATTTCCGGATCACAGTGCGTA
GCTTTCTGTCCCAGCGGCTACAAGACGAACAACCGGTCGGAGTGCGTGCT
CTGTAGCCCCGATGAGGCTTGTATCAGCTTCTGCACGCCGGAGTGGCCAG
GAAAAGCGTTCACCGTATACAATCTGGCTGATGCAGAGAATTTGCGTGGC
TGTCAGATCTTCAATGGCAGCCTGGTCATCACAATCCGCAACAAGGTGAA
CGAGACGCAGCTGTACCAGAGCTTCACTAGTATGCGCGAGGTTCGTGGGC
ATGTTAAAGTCTATCGTTCCTCCCAGCTAAGAAGCTTGCAATTCCTGAGA
AACCTAGAGCGCGTTCACGGTGATCCCCTAGAGAATCGCCACTACTCCTT
CATACTTTATGACAACAAGGAGCTGTCCGAGTTGTGGACACCTTCGCGGC
AACTGGAGTTCATGGAGGGCGGCATGTTCATGCATCGCAACAACAAACTG
TGCAACCGGAGGATGCGAGAATTCCAAAACGCTGTGACCCATGATAGAGC
CCTGGACTCCCTGCAGACCAACGACCAGGAGGTGCAGTGCAGCCCCTTGA
AATTGCAGCTATATGTGCAGAAACGAACCCATCGGTCTGTGAAGCTAAGC
TGGCTCAAGTCTCAAACAAGCCAGAAGATCGAGCTGATCCACCGACCTTT
ATTGCCGGGGAAACTATACCACGAAGAAAGTGAACTGGACGCGCCCATAT
GTACACGAATCAACTGGAAACGACGCCTGCTCTTCCCCGACGATCTGATC
GAAAATGGCACACACTATCTTTTCGACTTGGATGATCTTCAACCGGACAC
ACGGTATGTCGTCCTGTTGCGTACTTTCGGCAATGATGAGGCGCATGAAG
CGTATGAGGCACGCAGCGAATTGACCTACGTGCAGACGGAGCTGGACATA
CCAAAGCCTCCGTTGCTGGAGCTGGTCAAGAAGACGGATAGCTCGCTGAC
GGTTCAAATGGCCAGTCACGACCATGTTAGCTTTCTTCTGACGGTTTTCG
AATTAAGCGATGATCAGGATTATATAGAACAGAGGAACTACTGCCACCAG
CCGTCGTACGTGTGGCAGGACATGGACGGCCCCAGGTGGATGGCGTACGA
GGACTACGACGACTGTTGTGCCCAGAAGGCCGAGCAGTTTGAGGACTCTC
GTTTCATTGCGGACATGAGGGAACAATATCGCTGCACCCTTGATGATCGC
GAGCAGTGCCGACGACTGGCACATACCGAGGTCTCGCTTCCACAGCTTCG
GCTGCCGGGAAACACCACGGAGTACGAGCTTAAGGCGCTGCATCGCTATC
GCCTGTACGCGCTTCAGCTGCAAGCCTGCAATCCACTGGGATGCAGCAGC
CACACAACGCTCTACGGACGAACGAACTATACAATGGGTGCCGATCTTCT
CACCCAACTGTATGCCTGCCATATTCCGGAAATGGACAAGTACATTATGC
GCTTCGAGGAGCCTAAGAAGCCCAATGGCCTGGTGACCAACTACGTAATC
CACTTTCGCAACAACTTCTCGCAAACCCACGTCGGGTGTGTAACGCGGAT
GGATCACCAGAGTGCCGGCTACATGTACGTGAAGCAGATAAACATCACTT
TCACCGAGTGCGCTGTGCGGGTCCACTCCCTGGCCGGCGATGTGATGACG
CCCTACATGCCAATCAGCCTGTGCAGCGACGAGGACCGCCTACAGGCGTT
TCACAGCAGGGAGGCCAAGGATCTTTCGCCAGAAATCACAGACTTGCCAG
CCACAGCGTCACACGGCCGCGGCATTAGCATATTCCTGATCTGCTTCCTG
TTTGGGTGCAGTGTATCGCTGGTTTGGGTTCTTTACAAGCGGCGATGTTG
GAGAAAGTTGCCGGGACTCCGGCGATATGTGCCAGTGCGGGAGCAGTGGC
TTCGGGACCGACAACAAACCGAGGATCGCGAAATCCTTGTCGACGGTTTT
GAGACAGTTCGATTTCAAAACAACAACAACAGCCAGGCGGACGATTATCC
CATGGCAAGCTTTCTAGACCAT

BO10863.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:08:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG10702-RD 2841 CG10702-PD 1..2838 17..2854 14190 100 Plus
CG10702-RC 2841 CG10702-PC 1..2838 17..2854 14190 100 Plus
CG10702-RA 2841 CG10702-PA 1..2838 17..2854 14190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10702-RD 4041 CG10702-RD 729..3568 15..2854 14200 100 Plus
CG10702-RC 3893 CG10702-RC 1021..3860 15..2854 14200 100 Plus
CG10702-RA 3934 CG10702-RA 1062..3901 15..2854 14200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19065305..19066741 2854..1418 7185 100 Minus
2L 23513712 2L 19068203..19068579 391..15 1885 100 Minus
2L 23513712 2L 19067164..19067521 1116..759 1775 99.7 Minus
2L 23513712 2L 19066801..19067105 1420..1116 1525 100 Minus
2L 23513712 2L 19067782..19068026 633..389 1225 100 Minus
2L 23513712 2L 19067570..19067700 764..634 655 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:08:55 has no hits.

BO10863.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:52 Download gff for BO10863.complete
Subject Subject Range Query Range Percent Splice Strand
CG10702-RC 1..2841 17..2858 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:32:11 Download gff for BO10863.complete
Subject Subject Range Query Range Percent Splice Strand
CG10702-RC 998..3835 17..2856 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:22 Download gff for BO10863.complete
Subject Subject Range Query Range Percent Splice Strand
CG10702-RA 1064..3901 17..2856 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:53 Download gff for BO10863.complete
Subject Subject Range Query Range Percent Splice Strand
CG10702-RC 996..3838 15..2858 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:47 Download gff for BO10863.complete
Subject Subject Range Query Range Percent Splice Strand
CG10702-RA 1064..3901 17..2856 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:47 Download gff for BO10863.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19067782..19068023 392..633 100 <- Minus
2L 19065303..19066738 1421..2856 99 <- Minus
2L 19066801..19067104 1117..1420 100 <- Minus
2L 19067164..19067517 763..1116 100 <- Minus
2L 19067572..19067700 634..762 100 <- Minus
2L 19068203..19068577 17..391 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:22 Download gff for BO10863.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19065303..19066738 1421..2856 99 <- Minus
arm_2L 19066801..19067104 1117..1420 100 <- Minus
arm_2L 19067164..19067517 763..1116 100 <- Minus
arm_2L 19067572..19067700 634..762 100 <- Minus
arm_2L 19067782..19068023 392..633 100 <- Minus
arm_2L 19068203..19068577 17..391 100   Minus

BO10863.pep Sequence

Translation from 16 to 2872

> BO10863.pep
MHCGNMLLGVGLMFLALYVPCAESKKEHECTSIDIRNECKNMHLLDNCTV
VTGYVMITLITIEQRCNFSEYSYPLLTEITEFMIFTDVRGLVNITEMFPH
LTVIRGRRLFLNYALGVTNMHELEQLVFPKLVAIQRGQVYIGSCPKLCSI
GRVNWDLLTLTRGENNIIMVNKNCSTPVCSGCSSSHCWSNHYCQRSINEN
VANPKANINACHEECLGGCKNNSSSPADCSVCRGLSDDGVCVKSCPKDKY
VMENYQRCYTKAECVLKHGYVISGSQCVAFCPSGYKTNNRSECVLCSPDE
ACISFCTPEWPGKAFTVYNLADAENLRGCQIFNGSLVITIRNKVNETQLY
QSFTSMREVRGHVKVYRSSQLRSLQFLRNLERVHGDPLENRHYSFILYDN
KELSELWTPSRQLEFMEGGMFMHRNNKLCNRRMREFQNAVTHDRALDSLQ
TNDQEVQCSPLKLQLYVQKRTHRSVKLSWLKSQTSQKIELIHRPLLPGKL
YHEESELDAPICTRINWKRRLLFPDDLIENGTHYLFDLDDLQPDTRYVVL
LRTFGNDEAHEAYEARSELTYVQTELDIPKPPLLELVKKTDSSLTVQMAS
HDHVSFLLTVFELSDDQDYIEQRNYCHQPSYVWQDMDGPRWMAYEDYDDC
CAQKAEQFEDSRFIADMREQYRCTLDDREQCRRLAHTEVSLPQLRLPGNT
TEYELKALHRYRLYALQLQACNPLGCSSHTTLYGRTNYTMGADLLTQLYA
CHIPEMDKYIMRFEEPKKPNGLVTNYVIHFRNNFSQTHVGCVTRMDHQSA
GYMYVKQINITFTECAVRVHSLAGDVMTPYMPISLCSDEDRLQAFHSREA
KDLSPEITDLPATASHGRGISIFLICFLFGCSVSLVWVLYKRRCWRKLPG
LRRYVPVREQWLRDRQQTEDREILVDGFETVRFQNNNNSQADDYPMASFL
DH

BO10863.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:39:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG10702-PD 946 CG10702-PD 1..946 1..946 5120 100 Plus
CG10702-PC 946 CG10702-PC 1..946 1..946 5120 100 Plus
CG10702-PA 946 CG10702-PA 1..946 1..946 5120 100 Plus
CG10702-PB 946 CG10702-PB 1..946 1..946 5120 100 Plus
InR-PD 2144 CG18402-PD 333..770 24..429 528 30.8 Plus