Clone Sequence Records
BO10867.3prime Sequence
937 bp (768 high quality bases) assembled on 2006-04-19
> BO10867.3prime
ATGGTCTAGAAAGCTTGCGGGATTTGGAATTGTTGCATCTTTAGCGCTTC
CGGCCTTAGGGGCTGCGCTCTGACTTGAAATTGCGTTTTTGTCTTTGTCT
GACTTGGCATCCTTGGCCTTGACAGTGGCTGCCTCCTGCTTGAGATACTC
TTCCCGCGCCGCTTCGTAGAGACTAACGAACTTGTCCCGCTGGCCCTTGT
ACTGAGCGAAGAGCTCGTCGTCCTTGTGGCCCTTCAATCTGTTCTCGATG
TCCACCTTCTTGTCGTGCTCGCTGCGTATCTCGTCCGTTACCCAGGGCTT
TTCGATGGGATACTGATTGATCAGGTTCTTTAGTGTCTTTATGCTGCTCT
TGCCTTTCACCACCTGCTTGATTAGCTTGGGATTGGGCTTCATTATCCGG
CCGCCATTCATGTTCATTGGTCCATAAGGTCCGACCGGTGGAATTCCCCG
CGGCGGCATCCGTGGACCCATCATGTGCATGGGCGGTGGGACACCCATCA
TAGGACCTGGACCGGGTCCGTTGCGACGCATAAAGAGCGGTGGCGGCGGC
GGTGGTGGTCCACCCATGGGGCCCATGGGTCCGGGACCGCGCATACCAGG
CACCGGTGGCGGGAAAGGCATTTGCGGGTAAGGTCCTCCAGGGCCCATCG
GTCCGGGTCCCCGTGGTCCGGGGCCCATCGGACCCATTGGCGGACCCATC
ATGAGGCGTGGAGGAGGACGGTTCGGAGGCGGCCCGCGTTGGAATCCATT
AAAGCCACCGCGAATCTGATTGGGATTGTTGCCCGGATGGCGCTGCCAAT
CGCTTCCGTTCATCTGATTGTTGAAGGGCTGCTGCGACTGGTTCATATGA
TTTGTTGTCTGGTTGTTCATCTTGCCCTGCTGCTGGTTCGGACTGAGATG
CTGCTGCTGGTTCCAAATGGGATGCTGCTGCTGGTTC
BO10867.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3218-PA | 1392 | fs(1)K10-RA | 556..1389 | 852..19 | 4145 | 99.8 | Minus |
| CG3218-PA | 1392 | fs(1)K10-RA | 471..550 | 937..858 | 350 | 97.5 | Minus |
| CG3218-PA | 1392 | fs(1)K10-RA | 423..459 | 913..877 | 160 | 97.2 | Minus |
| CG3218-PA | 1392 | fs(1)K10-RA | 447..483 | 913..877 | 160 | 97.2 | Minus |
| CG3218-PA | 1392 | fs(1)K10-RA | 379..411 | 909..877 | 140 | 96.9 | Minus |
| CG3218-PA | 1392 | fs(1)K10-RA | 399..435 | 913..877 | 135 | 94.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:26:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 3052 | CG3218-RA | 642..1560 | 937..19 | 4505 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:26:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2242779..2243605 | 937..111 | 4030 | 99.2 | Minus |
| X | 23542271 | X | 2244455..2244549 | 113..19 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:26:10 has no hits.
BO10867.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:40 Download gff for
BO10867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 471..1392 | 18..937 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:09:34 Download gff for
BO10867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 471..1392 | 18..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:55:49 Download gff for
BO10867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 642..1565 | 13..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:40:03 Download gff for
BO10867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 642..1565 | 13..937 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:40:03 Download gff for
BO10867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2244457..2244554 | 13..111 | 96 | | Minus |
| X | 2242779..2243604 | 112..937 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:55:49 Download gff for
BO10867.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2136812..2137637 | 112..937 | 99 | -> | Minus |
| arm_X | 2138490..2138587 | 13..111 | 96 | | Minus |
BO10867.5prime Sequence
797 bp (796 high quality bases) assembled on 2006-04-19
> BO10867.5prime
GAAGTTATCAGTCGACATGGTGTCCAAGAACCAATTCTATCAGAACTGGA
CCATGCAGTCGCAGCAGCAGCACCCGCACCAAATGCAGCAACAGTTTCAG
CAACAGCAGCAGCCAAATCTGCAGCACCGCAACAACCAGAGCAACAATAA
TAATTGCAACAATAATCCCCGCGCAGCTGCGGCTCCGTATAGAAAACCGT
TTCGTTCGGGCAAAATTAACTCCGGACCAGGAGGAAATGGGAATGGTAAC
AGGGTCAACGGTAACAATCAGATGATGTTTTCCTCCAGCCAAATGCCGAG
CGATCCCCTGTACATTGACTTCAGCAGCCCGCCACCAGGATTCAAACACA
ATCAGGTAGGCAGTCCCAAGAAGAAGTCTATGAAGGGCATCAAACAGCAG
CAGCATCCCAGTCCGAACCAGCAGCAGCCTCCCAGTCCGAACCAGCAGCA
GCATCCCAGTCCGAACCAGCAGCAGCATCCCAGTCCGAACCAGCAGCAGC
ATCCCAATTCGAACCAGCAGCAGCATCTCAGTCCGAACCAGCAGCAGGGC
AAGATGAACAACCAGAACAACAATCATATGAACCAGTCGCAGCAGCCCTT
CAACAATCAGATGAACGGAAGCGATTGGCAGCGCCATCCGGGCAACAATC
CCAATCAGATTCGCGGTGGCTTTAATGGATTCCAACGCGGGCCGCCTCCG
AACCGTCCTCCTCCACGCCTCATGATGGGTCCGCCAATGGGTCCGATGGG
CCCCGGACCACGGGGACCCGGACCGATGGGCCCTGGAGGACCTTACC
BO10867.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3218-PA | 1392 | fs(1)K10-RA | 1..781 | 17..797 | 3905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:35:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 3052 | CG3218-RA | 172..952 | 17..797 | 3905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:35:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2242309..2243089 | 17..797 | 3905 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:35:48 has no hits.
BO10867.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:41 Download gff for
BO10867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 1..781 | 17..797 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:09:35 Download gff for
BO10867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3218-PA | 1..781 | 17..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:16:04 Download gff for
BO10867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..952 | 17..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:40:18 Download gff for
BO10867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..952 | 17..797 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:40:18 Download gff for
BO10867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2242309..2243089 | 17..797 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:16:04 Download gff for
BO10867.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2136342..2137122 | 17..797 | 100 | | Plus |
BO10867.complete Sequence
1423 bp assembled on 2007-10-17
GenBank Submission: FJ631904
> BO10867.complete
GAAGTTATCAGTCGACATGGTGTCCAAGAACCAATTCTATCAGAACTGGA
CCATGCAGTCGCAGCAGCAGCACCCGCACCAAATGCAGCAACAGTTTCAG
CAACAGCAGCAGCCAAATCTGCAGCACCGCAACAACCAGAGCAACAATAA
TAATTGCAACAATAATCCCCGCGCAGCTGCGGCTCCGTATAGAAAACCGT
TTCGTTCGGGCAAAATTAACTCCGGACCAGGAGGAAATGGGAATGGTAAC
AGGGTCAACGGTAACAATCAGATGATGTTTTCCTCCAGCCAAATGCCGAG
CGATCCCCTGTACATTGACTTCAGCAGCCCGCCACCAGGATTCAAACACA
ATCAGGTAGGCAGTCCCAAGAAGAAGTCTATGAAGGGCATCAAACAGCAG
CAGCATCCCAGTCCGAACCAGCAGCAGCCTCCCAGTCCGAACCAGCAGCA
GCATCCCAGTCCGAACCAGCAGCAGCATCCCAGTCCGAACCAGCAGCAGC
ATCCCAATTCGAACCAGCAGCAGCATCTCAGTCCGAACCAGCAGCAGGGC
AAGATGAACAACCAGAACAACAATCATATGAACCAGTCGCAGCAGCCCTT
CAACAATCAGATGAACGGAAGCGATTGGCAGCGCCATCCGGGCAACAATC
CCAATCAGATTCGCGGTGGCTTTAATGGATTCCAACGCGGGCCGCCTCCG
AACCGTCCTCCTCCACGCCTCATGATGGGTCCGCCAATGGGTCCGATGGG
CCCCGGACCACGGGGACCCGGACCGATGGGCCCTGGAGGACCTTACCCGC
AAATGCCTTTCCCGCCACCGGTGCCTGGTATGCGCGGTCCCGGACCCATG
GGCCCCATGGGTGGACCACCACCGCCGCCGCCACCGCTCTTTATGCGTCG
CAACGGACCCGGTCCAGGTCCTATGATGGGTGTCCCACCGCCCATGCACA
TGATGGGTCCACGGATGCCGCCGCGGGGAATTCCACCGGTCGGACCTTAT
GGACCAATGAACATGAATGGCGGCCGGATAATGAAGCCCAATCCCAAGCT
AATCAAGCAGGTGGTGAAAGGCAAGAGCAGCATAAAGACACTAAAGAACC
TGATCAATCAGTATCCCATCGAAAAGCCCTGGGTAACGGACGAGATACGC
AGCGAGCACGACAAGAAGGTGGACATCGAGAACAGATTGAAGGGCCACAA
GGACGACGAGCTCTTCGCTCAGTACAAGGGCCAGCGGGACAAGTTCGTTA
GTCTCTACGAAGCGGCGCGGGAAGAGTATCTCAAGCAGGAGGCAGCCACT
GTCAAGGCCAAGGATGCCAAGTCAGACAAAGACAAAAACGCAATTTCAAG
TCAGAGCGCAGCCCCTAAGGCCGGAAGCGCTAAAGATGCAACAATTCCAA
ATCCCGCAAGCTTTCTAGACCAT
BO10867.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 1392 | CG3218-PA | 1..1389 | 17..1405 | 6930 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:25:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-RA | 3052 | CG3218-RA | 172..1560 | 17..1405 | 6930 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2242309..2243605 | 17..1313 | 6470 | 99.9 | Plus |
| X | 23542271 | X | 2244455..2244549 | 1311..1405 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:25:43 has no hits.
BO10867.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:54 Download gff for
BO10867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 1..1392 | 17..1406 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:07:43 Download gff for
BO10867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 206..1599 | 17..1411 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:14:52 Download gff for
BO10867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..1560 | 17..1407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:46:32 Download gff for
BO10867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 206..1594 | 17..1407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:10:24 Download gff for
BO10867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)K10-RA | 172..1560 | 17..1407 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:10:24 Download gff for
BO10867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2244457..2244549 | 1313..1407 | 97 | | Plus |
| X | 2242309..2243604 | 17..1312 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:14:52 Download gff for
BO10867.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2136342..2137637 | 17..1312 | 99 | -> | Plus |
| arm_X | 2138490..2138582 | 1313..1407 | 97 | | Plus |
BO10867.pep Sequence
Translation from 16 to 1423
> BO10867.pep
MVSKNQFYQNWTMQSQQQHPHQMQQQFQQQQQPNLQHRNNQSNNNNCNNN
PRAAAAPYRKPFRSGKINSGPGGNGNGNRVNGNNQMMFSSSQMPSDPLYI
DFSSPPPGFKHNQVGSPKKKSMKGIKQQQHPSPNQQQPPSPNQQQHPSPN
QQQHPSPNQQQHPNSNQQQHLSPNQQQGKMNNQNNNHMNQSQQPFNNQMN
GSDWQRHPGNNPNQIRGGFNGFQRGPPPNRPPPRLMMGPPMGPMGPGPRG
PGPMGPGGPYPQMPFPPPVPGMRGPGPMGPMGGPPPPPPPLFMRRNGPGP
GPMMGVPPPMHMMGPRMPPRGIPPVGPYGPMNMNGGRIMKPNPKLIKQVV
KGKSSIKTLKNLINQYPIEKPWVTDEIRSEHDKKVDIENRLKGHKDDELF
AQYKGQRDKFVSLYEAAREEYLKQEAATVKAKDAKSDKDKNAISSQSAAP
KAGSAKDATIPNPASFLDH
BO10867.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)K10-PA | 463 | CG3218-PA | 1..463 | 1..463 | 2588 | 100 | Plus |
| CG10555-PB | 926 | CG10555-PB | 278..617 | 16..336 | 239 | 29 | Plus |
| CG10555-PA | 926 | CG10555-PA | 278..617 | 16..336 | 239 | 29 | Plus |
| ena-PE | 684 | CG15112-PE | 158..467 | 33..330 | 230 | 28.5 | Plus |
| ena-PC | 684 | CG15112-PC | 158..467 | 33..330 | 230 | 28.5 | Plus |
| ena-PE | 684 | CG15112-PE | 71..473 | 21..343 | 199 | 27.2 | Plus |
| CG10555-PB | 926 | CG10555-PB | 249..575 | 82..343 | 191 | 26.7 | Plus |
| CG10555-PA | 926 | CG10555-PA | 249..575 | 82..343 | 191 | 26.7 | Plus |
| ena-PE | 684 | CG15112-PE | 242..477 | 14..290 | 183 | 27.6 | Plus |
| CG10555-PB | 926 | CG10555-PB | 631..918 | 15..329 | 182 | 29 | Plus |
| CG10555-PA | 926 | CG10555-PA | 631..918 | 15..329 | 182 | 29 | Plus |
