Clone Sequence Records
BO10873.3prime Sequence
952 bp (846 high quality bases) assembled on 2006-04-19
> BO10873.3prime
ATGGTCTAGAAAGCTTGCATCGTCCCAGCTCCAAGCGGGATCCAGCTCAC
GGTTGACCCGCCACAGCATCAGTTCCATACAGGCGCGCGAGTCCTCGAAG
CTGCTGTGTCCCGTGGTGCCGTCGCCAGCTTGAATGTCACGCTTCAGGTG
AACCTTTGTGAGGTGACGCAGTGCCCGGCGGTAGGGGAACCCATTGCAGT
GCGGGAAGCTAATGGAGGTGTCGATCAGGGTGTTGTGAACCAAGCGTAGC
GCTCGCAGATCGTTTTCCAATCCATGTCCGATAAGGATGGTGTCCGCCGT
GATCAGCTGGAGGAGATCCCTTTGCACCTCGGCCAGACTCTTGGCTCCGG
AACACAGATCCGTTTCCGTAATGCCCGAATACTGGGTGTTGTAGTCTATT
ATGTCGCACACGGGCCGAACGAAATGCTCATAAACCAATTGCCCGTTGAG
TGCCACCAGGGAGACCTTGGTCACGTCCAGACCACGACCCGTGTAGCTCA
TCTCGCAGTCCAGGGCGTATACGGCGGGCTCGTCCTCGCCGGATCCTCGG
TGCTCGGTCCTAACGAAATCGTAGTAGGGCCCGTTGACCCCCACCACCGA
TCCCGACCACACATGACGGTCGCCCAGGCAGCATCCCGGCGAGGATTCCT
CGCCCTCGTTGCAGCACGTCCAGCGTCCGTGGCTGACGCCATCGTAGTAC
CGCTGGTACTTGCCTGAGTGGTATTGGCATTCCTCATGGGTCAAATACTG
ACCCGTCAGCTCGTCAACCAGAAAGTGGCGCTTGCAGCGCGCACAAGGCT
TGGACAGACTCCTTTCCACCGGCACAAAATGGCAGTACTTCAACTCGAGA
CCCAGCGCTGCTTCGCCGGCGGAGGAGGACGATGAGTTCGAGGACTCGCA
TTCACTGCCGCTCCACTCGCCGCCTGATTCGGAGTCTAAGGATTGGGGTG
AA
BO10873.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14801-PB | 2364 | CG14801-RB | 1428..2361 | 952..19 | 4670 | 100 | Minus |
CG14801-PD | 2229 | CG14801-RD | 1293..2226 | 952..19 | 4670 | 100 | Minus |
CG14801-PC | 2286 | CG14801-RC | 1350..2283 | 952..19 | 4670 | 100 | Minus |
CG14801-PA | 2286 | CG14801-RA | 1350..2283 | 952..19 | 4670 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:39:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42666-RK | 3700 | CG42666-RK | 1557..2490 | 952..19 | 4670 | 100 | Minus |
CG42666-RJ | 3749 | CG42666-RJ | 2340..3273 | 952..19 | 4670 | 100 | Minus |
CG42666-RI | 2821 | CG42666-RI | 1412..2345 | 952..19 | 4670 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:39:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1851524..1852457 | 952..19 | 4670 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:39:17 has no hits.
BO10873.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:52 Download gff for
BO10873.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14801-PA | 1352..2286 | 18..950 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:09:51 Download gff for
BO10873.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14801-PA | 1352..2286 | 18..950 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:02:19 Download gff for
BO10873.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42666-RI | 1412..2345 | 19..952 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:17:59 Download gff for
BO10873.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42666-RI | 1412..2345 | 19..952 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:17:59 Download gff for
BO10873.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1851524..1852457 | 19..952 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:02:19 Download gff for
BO10873.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1745557..1746490 | 19..952 | 100 | | Minus |
BO10873.5prime Sequence
894 bp (784 high quality bases) assembled on 2006-04-19
> BO10873.5prime
GAAGTTATCAGTCGACATGGAGCAAATAACGAACTACTTCGAGCACATGG
ATTACGTGTCCTTCAGCGTGGTGGCGCTGCCGTGCGTCGTCATCGCCGTC
TACGGATTCCTGCAGGTGGCCAGTGGCCTGGCCAAGTGCAAAAATGACAA
AATGCAGAGTTGCAACAAAAACAGCAGTAGCCGTATCACCACCACCAACA
ACAACGTTACTACAACTAGCAACATTAGCGGCAACAGCAGCAACAAGCGC
TGCCCTCAGAAGTACACCGGCAACACCCTAGCCGTCAACAGTAACATGCT
GGCCTATCAGCAGCAAGCCACCGCCGGTGGCAAGAACTCCACTCGGAAGA
GTCGTCACAACAACAACAAGCAAAATCATCAGCAGCAACAACAACAACAG
CAGCAGCAGTTTGATCATATCCACAAGCGCAATGGAACCGCTGGAGGCAC
CGGATCCGAGTGCTCTCCCGCTGCACCCACATCCAACTGGCTCCAACGGG
GCTACGGACGACAGTTTGTCCATTCTTCATGCATCGAAGACAAACTCCTA
GGTCATCACAATCCGGGCCATCGCAATAGCACCAGCAGCGACGCGACCAG
CGAGGATATAGACTCCAGTAGCGAGCTTCCAAACAAGTCGAAGGGAAATT
CATGCGCCGGCAGCATCCATGCTTCAGGCGGCAGCAAGAGTCGCTCGAAG
CGCCACCAAAAGCAGTCCGGCCAGCAGACTCGCAATCCCGATCACAATGG
CCAAAGGACCGGAGCAGCTACCCCCTGTACGGGCCAGAAAGCCAAGCAGG
GGAATGCCAAGTGGCGCCAGCAGCAACCCAATCCCAGCAGCAACAACCAA
CAGCAGCAGATGCAACAACAGATGCAACAGCAGAAGCGCGGCAG
BO10873.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14801-PB | 2364 | CG14801-RB | 1..878 | 17..894 | 4390 | 100 | Plus |
CG14801-PC | 2286 | CG14801-RC | 50..800 | 144..894 | 3755 | 100 | Plus |
CG14801-PA | 2286 | CG14801-RA | 50..800 | 144..894 | 3755 | 100 | Plus |
CG14801-PD | 2229 | CG14801-RD | 1..743 | 152..894 | 3715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:55:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42666-RB | 3467 | CG14801-RB | 631..1508 | 17..894 | 4390 | 100 | Plus |
CG42666-RK | 3700 | CG42666-RK | 252..1007 | 139..894 | 3765 | 99.9 | Plus |
CG42666-RH | 2784 | CG42666-RH | 71..825 | 140..894 | 3760 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:55:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1843692..1844087 | 144..539 | 1980 | 100 | Plus |
X | 23542271 | X | 1850618..1850974 | 538..894 | 1785 | 100 | Plus |
X | 23542271 | X | 1831933..1832059 | 17..143 | 635 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 00:55:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6923 | 191..395 | 292 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2659 | 133..408 | 280 | 59.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2527 | 183..408 | 264 | 62.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6806..7086 | 133..417 | 264 | 59.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6932 | 233..450 | 248 | 60.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..7032 | 133..431 | 242 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6693..6951 | 117..393 | 234 | 58.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2563 | 138..383 | 228 | 57.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2590..2832 | 170..407 | 203 | 58.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..7035 | 133..405 | 198 | 57.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2741..2971 | 179..405 | 196 | 60.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1041..1165 | 150..273 | 190 | 62.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1058..1154 | 178..274 | 169 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1517..1575 | 192..250 | 132 | 73.3 | Plus |
BS | 5142 | BS BS 5142bp | 2017..2105 | 162..247 | 132 | 62.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1078..1163 | 147..238 | 129 | 67.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1107..1165 | 158..218 | 129 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1508..1591 | 163..248 | 128 | 64.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1057..1143 | 210..296 | 128 | 66.7 | Plus |
BO10873.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:51:52 Download gff for
BO10873.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14801-PB | 1..878 | 17..894 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:09:52 Download gff for
BO10873.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14801-PB | 1..878 | 17..894 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 11:04:03 Download gff for
BO10873.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42666-RB | 606..1489 | 7..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:49:56 Download gff for
BO10873.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42666-RB | 625..1508 | 7..894 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:49:56 Download gff for
BO10873.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1843692..1844087 | 144..539 | 100 | -> | Plus |
X | 1850620..1850974 | 540..894 | 100 | | Plus |
X | 1831927..1832059 | 7..143 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 11:04:03 Download gff for
BO10873.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1725960..1726092 | 7..143 | 97 | -> | Plus |
arm_X | 1737725..1738120 | 144..539 | 100 | -> | Plus |
arm_X | 1744653..1745007 | 540..894 | 100 | | Plus |
BO10873.complete Sequence
2395 bp assembled on 2008-01-16
GenBank Submission: FJ631907
> BO10873.complete
GAAGTTATCAGTCGACATGGAGCAAATAACGAACTACTTCGAGCACATGG
ATTACGTGTCCTTCAGCGTGGTGGCGCTGCCGTGCGTCGTCATCGCCGTC
TACGGATTCCTGCAGGTGGCCAGTGGCCTGGCCAAGTGCAAAAATGACAA
AATGCAGAGTTGCAACAAAAACAGCAGTAGCCGTATCACCACCACCAACA
ACAACGTTACTACAACTAGCAACATTAGCGGCAACAGCAGCAACAAGCGC
TGCCCTCAGAAGTACACCGGCAACACCCTAGCCGTCAACAGTAACATGCT
GGCCTATCAGCAGCAAGCCACCGCCGGTGGCAAGAACTCCACTCGGAAGA
GTCGTCACAACAACAACAAGCAAAATCATCAGCAGCAACAACAACAACAG
CAGCAGCAGTTTGATCATATCCACAAGCGCAATGGAACCGCTGGAGGCAC
CGGATCCGAGTGCTCTCCCGCTGCACCCACATCCAACTGGCTCCAACGGG
GCTACGGACGACAGTTTGTCCATTCTTCATGCATCGAAGACAAACTCCTA
GGTCATCACAATCCGGGCCATCGCAATAGCACCAGCAGCGACGCGACCAG
CGAGGATATAGACTCCAGTAGCGAGCTTCCAAACAAGTCGAAGGGAAATT
CATGCGCCGGCAGCATCCATGCTTCAGGCGGCAGCAAGAGTCGCTCGAAG
CGCCACCAAAAGCAGTCCGGCCAGCAGACTCGCAATCCCGATCACAATGG
CCAAAGGACCGGAGCAGCTACCCCCTGTACGGGCCAGAAAGCCAAGCAGG
GGAATGCCAAGTGGCGCCAGCAGCAACCCAATCCCAGCAGCAACAACCAA
CAGCAGCAGATGCAACAACAGATGCAACAGCAGAAGCGCGGCAGGAACAA
GAAGCCCGGGAAGTGGAGCAACAACATCATTGACAACCCAAACAGCAATC
ACGGCGGCAGCAGTCAACAGAAGACTTGCGACAGCAGCTCCTCCTCTGCG
CTGAGTTCGCCAACCAGTTCGGCCACCACATCGGCCACCAGTTCGCCCAC
CAATTCGCCCACCAGTTACCCCCGTGCCAATGGAAATCGGAAGCGGATCG
AAGCGGCACTGGAATGGCGCCGGGAGCAAGAGCTTGGTCGCCAGAATGCC
AACTTCCTGGTTCCTCCTCTCCGCCAGTACGAGCAACTGGAGTTTGACGA
TAAAACCGTGGTGCAGCAACTGCGTCGACACATCATAGATAATCATCTGC
TGAGGGTCTACGGCTTTCCCGTGGATTCGGTGGTCCACGAAGGCGCCATC
GAAATCTTCAAGTGCATGCCGCACATGAGTTTTGCAGCCGCGCTTGCGGA
AACTGCTCAGGCCGTTACAGTGATCAACTACCACGACGGACTGACCAACC
GCGCCGAGGAGGAGGTGGCCAATTCGACCGATTCGGGCAACAGTTCACCC
CAATCCTTAGACTCCGAATCAGGCGGCGAGTGGAGCGGCAGTGAATGCGA
GTCCTCGAACTCATCGTCCTCCTCCGCCGGCGAAGCAGCGCTGGGTCTCG
AGTTGAAGTACTGCCATTTTGTGCCGGTGGAAAGGAGTCTGTCCAAGCCT
TGTGCGCGCTGCAAGCGCCACTTTCTGGTTGACGAGCTGACGGGTCAGTA
TTTGACCCATGAGGAATGCCAATACCACTCAGGCAAGTACCAGCGGTACT
ACGATGGCGTCAGCCACGGACGCTGGACGTGCTGCAACGAGGGCGAGGAA
TCCTCGCCGGGATGCTGCCTGGGCGACCGTCATGTGTGGTCGGGATCGGT
GGTGGGGGTCAACGGGCCCTACTACGATTTCGTTAGGACCGAGCACCGAG
GATCCGGCGAGGACGAGCCCGCCGTATACGCCCTGGACTGCGAGATGAGC
TACACGGGTCGTGGTCTGGACGTGACCAAGGTCTCCCTGGTGGCACTCAA
CGGGCAATTGGTTTATGAGCATTTCGTTCGGCCCGTGTGCGACATAATAG
ACTACAACACCCAGTATTCGGGCATTACGGAAACGGATCTGTGTTCCGGA
GCCAAGAGTCTGGCCGAGGTGCAAAGGGATCTCCTCCAGCTGATCACGGC
GGACACCATCCTTATCGGACATGGATTGGAAAACGATCTGCGAGCGCTAC
GCTTGGTTCACAACACCCTGATCGACACCTCCATTAGCTTCCCGCACTGC
AATGGGTTCCCCTACCGCCGGGCACTGCGTCACCTCACAAAGGTTCACCT
GAAGCGTGACATTCAAGCTGGCGACGGCACCACGGGACACAGCAGCTTCG
AGGACTCGCGCGCCTGTATGGAACTGATGCTGTGGCGGGTCAACCGTGAG
CTGGATCCCGCTTGGAGCTGGGACGATGCAAGCTTTCTAGACCAT
BO10873.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42666-RB | 2364 | CG42666-PB | 1..2361 | 17..2377 | 11805 | 100 | Plus |
CG42666-RJ | 2559 | CG42666-PJ | 323..2556 | 144..2377 | 11170 | 100 | Plus |
CG42666-RF | 2286 | CG42666-PF | 50..2283 | 144..2377 | 11170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:48:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42666-RB | 3467 | CG14801-RB | 631..2991 | 17..2377 | 11805 | 100 | Plus |
CG42666-RK | 3700 | CG42666-RK | 252..2490 | 139..2377 | 11180 | 100 | Plus |
CG42666-RH | 2784 | CG42666-RH | 71..2308 | 140..2377 | 11175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:48:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1850618..1852457 | 538..2377 | 9200 | 100 | Plus |
X | 23542271 | X | 1843692..1844087 | 144..539 | 1980 | 100 | Plus |
X | 23542271 | X | 1831933..1832059 | 17..143 | 635 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 05:48:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6923 | 191..395 | 292 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2659 | 133..408 | 280 | 59.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2527 | 183..408 | 264 | 62.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6806..7086 | 133..417 | 264 | 59.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..7032 | 133..431 | 242 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6693..6951 | 117..393 | 234 | 58.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2563 | 138..383 | 228 | 57.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2590..2832 | 170..407 | 203 | 58.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..7035 | 133..405 | 198 | 57.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2741..2971 | 179..405 | 196 | 60.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1041..1165 | 150..273 | 190 | 62.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1058..1154 | 178..274 | 169 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1517..1575 | 192..250 | 132 | 73.3 | Plus |
BS | 5142 | BS BS 5142bp | 2017..2105 | 162..247 | 132 | 62.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1078..1163 | 147..238 | 129 | 67.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1107..1165 | 158..218 | 129 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1508..1591 | 163..248 | 128 | 64.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1613 | 892..983 | 119 | 61.5 | Plus |
BO10873.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:56 Download gff for
BO10873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14801-RB | 1..2364 | 17..2378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:36:04 Download gff for
BO10873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14801-RB | 612..2972 | 17..2379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:11:39 Download gff for
BO10873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42666-RB | 612..2972 | 17..2379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:56 Download gff for
BO10873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14801-RB | 606..2972 | 7..2377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:18:38 Download gff for
BO10873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42666-RB | 631..2991 | 17..2379 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:18:38 Download gff for
BO10873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1831933..1832059 | 17..143 | 100 | -> | Plus |
X | 1843692..1844087 | 144..539 | 100 | -> | Plus |
X | 1850620..1852457 | 540..2379 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:11:39 Download gff for
BO10873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1725966..1726092 | 17..143 | 100 | -> | Plus |
arm_X | 1737725..1738120 | 144..539 | 100 | -> | Plus |
arm_X | 1744653..1746490 | 540..2379 | 99 | | Plus |
BO10873.pep Sequence
Translation from 16 to 2395
> BO10873.pep
MEQITNYFEHMDYVSFSVVALPCVVIAVYGFLQVASGLAKCKNDKMQSCN
KNSSSRITTTNNNVTTTSNISGNSSNKRCPQKYTGNTLAVNSNMLAYQQQ
ATAGGKNSTRKSRHNNNKQNHQQQQQQQQQQFDHIHKRNGTAGGTGSECS
PAAPTSNWLQRGYGRQFVHSSCIEDKLLGHHNPGHRNSTSSDATSEDIDS
SSELPNKSKGNSCAGSIHASGGSKSRSKRHQKQSGQQTRNPDHNGQRTGA
ATPCTGQKAKQGNAKWRQQQPNPSSNNQQQQMQQQMQQQKRGRNKKPGKW
SNNIIDNPNSNHGGSSQQKTCDSSSSSALSSPTSSATTSATSSPTNSPTS
YPRANGNRKRIEAALEWRREQELGRQNANFLVPPLRQYEQLEFDDKTVVQ
QLRRHIIDNHLLRVYGFPVDSVVHEGAIEIFKCMPHMSFAAALAETAQAV
TVINYHDGLTNRAEEEVANSTDSGNSSPQSLDSESGGEWSGSECESSNSS
SSSAGEAALGLELKYCHFVPVERSLSKPCARCKRHFLVDELTGQYLTHEE
CQYHSGKYQRYYDGVSHGRWTCCNEGEESSPGCCLGDRHVWSGSVVGVNG
PYYDFVRTEHRGSGEDEPAVYALDCEMSYTGRGLDVTKVSLVALNGQLVY
EHFVRPVCDIIDYNTQYSGITETDLCSGAKSLAEVQRDLLQLITADTILI
GHGLENDLRALRLVHNTLIDTSISFPHCNGFPYRRALRHLTKVHLKRDIQ
AGDGTTGHSSFEDSRACMELMLWRVNRELDPAWSWDDASFLDH
BO10873.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42666-PB | 787 | CG42666-PB | 1..787 | 1..787 | 4208 | 100 | Plus |
CG42666-PJ | 852 | CG42666-PJ | 109..852 | 44..787 | 3985 | 100 | Plus |
CG42666-PF | 761 | CG42666-PF | 18..761 | 44..787 | 3985 | 100 | Plus |
CG42666-PE | 852 | CG42666-PE | 109..852 | 44..787 | 3985 | 100 | Plus |
CG42666-PA | 761 | CG42666-PA | 18..761 | 44..787 | 3985 | 100 | Plus |