Clone Sequence Records
BO10889.3prime Sequence
922 bp (822 high quality bases) assembled on 2006-04-19
> BO10889.3prime
ATGGTCTAGAAAGCTTGCTTTTAGCTGATCGCGGTACGTTATGATTGCCT
TCATCAGCAGACGGACGTTGCTGAACTGCGAATTCTTGGGGCTGTTCTTA
ATGAACTGCTGACAATTGCGATACAGCTCGGTGAGCACTTTAGGAGCGTG
CTCGCGGGTAATGGGATCTGCCATATTGATGGCCAACAGTGCCTCGTTGA
GATATCTCTGCTTAAGCTCATTGTGATTGGTCATGTCAGCGGATATTTGC
TGAATGAGCGACAGTAGAACCTTTTGCTCCAGTCTGCATCCCTCTGGTGC
GAATGCCTGGTTGCTGTCCGTGTGTCGGAGAGTGAACTCCACTAGGCCCA
AGTCGTTGGCCAATAGAGCCTGATGGAAGGCCTTGTTGATTTGTCCAGCC
ATCAAAAGCTGCTTAATGCTGTCCCTGAGGTCGTAAGGTGGTGCAGGCGT
AGCTGCCTGCGAACGCATTGCCACGTTCTGGGCTTCCATGTGCTTGCGTA
GCTCTGCTCTGATCGTTTCCTGTACCTGACGCGCCAGCAAAATCTCTAAG
CTCTTCACTTCTCTTTGTGTCTCGAGCATGGCGTCCGTGAGTTCAGTGCG
GTGCTTGTGCAAGCTGCTCTCTACCAATTGCTTAAGCATGGACAACTTGT
TGTTTATCTCCTCCGTATTGCCACTCCCGGCTTGGGGCTGTGGCATGTGC
TGCAGGTAGGTGTTAAACTGGACCATAAAGTCTTTTATGCCCACGCTGAA
AGCGTCATGCAGTTGTTTAAACATGTTCTGCGAGGACTTCTCATAAGCTG
GAATCAAGGTGCTGCTCATAGATTCAATGAAAGCGGTTTGTAGGCTGGTT
TGAACACCAATCAACACGGACTTGCCAAAAGTATCCAGAAATTGCTTGCT
CTTGCACACCTGGGGCATATTC
BO10889.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6181-PA | 4065 | CG6181-RA | 3167..4062 | 914..19 | 4455 | 99.8 | Minus |
CG6181-PB | 4065 | CG6181-RB | 3167..4062 | 914..19 | 4455 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:38:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ge-1-RB | 4932 | CG6181-RB | 3488..4391 | 922..19 | 4475 | 99.7 | Minus |
Ge-1-RA | 4646 | CG6181-RA | 3405..4308 | 922..19 | 4475 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 10:38:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11095953..11096475 | 206..728 | 2615 | 100 | Plus |
2L | 23513712 | 2L | 11095691..11095879 | 19..207 | 945 | 100 | Plus |
2L | 23513712 | 2L | 11096536..11096703 | 729..896 | 825 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-01 10:38:53 has no hits.
BO10889.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:14 Download gff for
BO10889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6181-PA | 3159..4065 | 16..922 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:19 Download gff for
BO10889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6181-PB | 3159..4065 | 16..922 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:29:51 Download gff for
BO10889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ge-1-RA | 3405..4308 | 19..922 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:06:08 Download gff for
BO10889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ge-1-RA | 3405..4308 | 19..922 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:06:08 Download gff for
BO10889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11095691..11095877 | 19..205 | 100 | <- | Plus |
2L | 11095953..11096475 | 206..728 | 100 | <- | Plus |
2L | 11096536..11096701 | 729..894 | 99 | <- | Plus |
2L | 11096765..11096792 | 895..922 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:29:51 Download gff for
BO10889.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11095691..11095877 | 19..205 | 100 | <- | Plus |
arm_2L | 11095953..11096475 | 206..728 | 100 | <- | Plus |
arm_2L | 11096536..11096701 | 729..894 | 99 | <- | Plus |
arm_2L | 11096765..11096792 | 895..922 | 92 | | Plus |
BO10889.5prime Sequence
916 bp (836 high quality bases) assembled on 2006-04-19
> BO10889.5prime
GAAGTTATCAGTCGACATGTTAATCGCGCTCTTCGCGCTTGCACACTTGC
CAATCTTTCGTAAGACGCCTTTGTCAGCCTCCTCCTCCCCGCCGCCGTCT
GTCCACCGGTCGCCAAGGTGTGGCAAAGCAAGTACCGCGTACCATCCACC
GCCAGCAGACGCCTGCATCAGCATTACTGCTTCAGCCATTGACGCAGCAT
CCGGGATGAGCAACAGCGCCGAACAGGACAAGCCGATTGCCGCCAACGGC
AATGCGGCAGAGCCCCAGGAAATAGAAGTCATCCATTTCCAAGCGCAAGA
GAAGCAGTGTTGCCGCGTTATTAGATCCAATAAGACCAAGGTCCTCACAT
CCGGCGGCGTTCACACACGCGGTTCCTCCAAGGTCAAGCTAAAGAACATC
GTCGACTACAAGTGGGAGCGCAAGTACTACTATCCGGGTCACCTGGTCGC
TGTCCACCGCGATGGCAAGCACCTGGCGTACGCCATTAATGTCAACAACA
AAGCCACCGGAATGGAGGGCATGGTGCGCGTATGCAACATAGCCACCAGT
ATGCGAGCCTTGATCAAGGGAATGAGCGGCGAGGTCTTAGATCTGCAGTT
TGCCCATACGGATTGTGAGCGTATATTAGCTGTGATCGATGTCAGTTCGC
TGTTTGTCTACAAAGTCGATCAAATCGAAGGGAACCTGCTGTGCAATCTA
GTGCTAAAGGTGGAGGACCCCATCGCCAACTATGTGCCGGAGTACGATAT
GGTCTCCTGGTGTCCCTATGTCTGCAGCAGCAGCGCCACCGTTCCAATCA
ACGACGATGACGATGAGAATCAGCTGCTCATTTGGTCGCGAAGCTCTCAA
TTTCAATGCTTTCAAGTGAAGATGATTGTCTCTGAACATGGGCGCGGCAA
GATCCCACCAGCAGCC
BO10889.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6181-PA | 4065 | CG6181-RA | 1..900 | 17..916 | 4475 | 99.8 | Plus |
CG6181-PB | 4065 | CG6181-RB | 1..900 | 17..916 | 4475 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:34:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ge-1-RB | 4932 | CG6181-RB | 330..1229 | 17..916 | 4485 | 99.9 | Plus |
Ge-1-RA | 4646 | CG6181-RA | 247..1146 | 17..916 | 4485 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:33:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11099354..11099755 | 892..491 | 2010 | 100 | Minus |
2L | 23513712 | 2L | 11100294..11100559 | 282..17 | 1330 | 100 | Minus |
2L | 23513712 | 2L | 11100017..11100225 | 491..283 | 1045 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:34:02 has no hits.
BO10889.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:15 Download gff for
BO10889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6181-PA | 1..900 | 17..916 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:21 Download gff for
BO10889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6181-PB | 1..900 | 17..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 06:15:55 Download gff for
BO10889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ge-1-RA | 239..1146 | 7..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:39:59 Download gff for
BO10889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ge-1-RA | 239..1146 | 7..916 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:39:59 Download gff for
BO10889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11099272..11099295 | 893..916 | 95 | <- | Minus |
2L | 11099354..11099754 | 492..892 | 100 | <- | Minus |
2L | 11100017..11100225 | 283..491 | 100 | <- | Minus |
2L | 11100294..11100567 | 7..282 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 06:15:55 Download gff for
BO10889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11099272..11099295 | 893..916 | 95 | <- | Minus |
arm_2L | 11099354..11099754 | 492..892 | 100 | <- | Minus |
arm_2L | 11100017..11100225 | 283..491 | 100 | <- | Minus |
arm_2L | 11100294..11100567 | 7..282 | 98 | | Minus |
BO10889.complete Sequence
4096 bp (4096 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631913
> BO10889.complete
GAAGTTATCAGTCGACATGTTAATCGCGCTCTTCGCGCTTGCACACTTGC
CAATCTTTCGTAAGACGCCTTTGTCAGCCTCCTCCTCCCCGCCGCCGTCT
GTCCACCGGTCGCCAAGGTGTGGCAAAGCAAGTACCGCGTACCATCCACC
GCCAGCAGACGCCTGCATCAGCATTACTGCTTCAGCCATTGACGCAGCAT
CCGGGATGAGCAACAGCGCCGAACAGGACAAGCCGATTGCCGCCAACGGC
AATGCGGCAGAGCCCCAGGAAATAGAAGTCATCCATTTCCAAGCGCAAGA
GAAGCAGTGTTGCCGCGTTATTAGATCCAATAAGACCAAGGTCCTCACAT
CCGGCGGCGTTCACACACGCGGTTCCTCCAAGGTCAAGCTAAAGAACATC
GTCGACTACAAGTGGGAGCGCAAGTACTACTATCCGGGTCACCTGGTCGC
TGTCCACCGCGATGGCAAGCACCTGGCGTACGCCATTAATGTCAACAACA
AAGCCACCGGAATGGAGGGCATGGTGCGCGTATGCAACATAGCCACCAGT
ATGCGAGCCTTGATCAAGGGAATGAGCGGCGAGGTCTTAGATCTGCAGTT
TGCCCATACGGATTGTGAGCGTATATTAGCTGTGATCGATGTCAGTTCGC
TGTTTGTCTACAAAGTCGATCAAATCGAAGGGAACCTGCTGTGCAATCTA
GTGCTAAAGGTGGAGGACCCCATCGCCAACTATGTGCCGGAGTACGATAT
GGTCTCCTGGTGTCCCTATGTCTGCAGCAGCAGCGCCACCGTTCCAATCA
ACGACGATGACGATGAGAATCAGCTGCTCATTTGGTCGCGAAGCTCTCAA
TTTCAATGCTTTCAAGTGAAGATGATTGTCTCTGAACATGGGCGCGGCAA
GATCCAACCAGCAGCCCTAGAATCTGGATATCTGAAGATTGAGGAGGACT
CGTTGATCACGTGCGCCGCTTTGTCCCCGGATGGCACCACTGTGGCTGCT
GCTTGCGCCGATGGCTTGGTTCGTTTCTACCAAATTTATTTGTTCGATGT
GCGCAACCATCGCTGCCTGCACGAGTGGAAGCCACATGATGGCAAAAAAG
TCTGCTCTCTCTTTTTTCTCGACAATATCAACAAGCCTGTGGAAGAATCC
TACTGGCAGCACGTGATCACTACGAGCGATGCCAATACCGAAATCAAGCT
CTGGAACTGCTCGCTATGGAAATGCCTCCAAACTATCAATGTGGTGGCCA
GTCCGTCATCTTTGCAGCCCAGAAACTTTATCGCGGGCATAGATCGCAGT
GCGAACTACTTGGTGTTGTCTTGCCTGGACTCTCTGGCCGTGTATGTAAT
GCAGATTGGCAGTACTGGCGGCGCAGACTCCGAGAATAGGAGTAGCGATA
GCGAAGGAGAAGGCTGCGACACTTCCAAACGCATTCAGAATGTTGCCGAA
TTCAAGCTGAGTTCGGGGATTCTCTCTTTTTCTATTGTAAACGCTAGTAT
GCGTCGCGTTAAGAACTCCATCGAGAGCTACTATCCTATTGAGGAGCCCG
ATGACTTCGATGACGATTCCAATTCCACCAGTGCCCTTGTGCTGCACATG
TTTGTGGTGCAGGCAAAGAGCCTGCAGGAATGTCAAATAATCTACCAGCC
ATGTGTGGCTGAAAAGACGGAGCGGAGCAGCCTAAACAGCAAGCGATCAC
AGACGCCAGAAGACAATCTGCTAATCAAAGAGGAGCCGGAATCCCCCAAC
AGTGGAACTGTGGGTGCTGTTCAGCTGGATGCATTATTCGCAAAATCCGC
AAAGAGAGCTTCAACGGGCAGTTCATCTGCCATGGTGGCCGTGGCGGCAG
CCGCGGCTGCGGCACCTTCGGCCATCCTGCAGGACGCCACTAAGGAGGCG
GCCAAGTCAGAGTCCCCGCAACTAAGCAGCGCGTATACGCAGCAGGTTAA
TCTCATGACTCCAGATGCCTTCAGTGCAAGCGGAACCGCAGCGGCAGCAG
CTGTATTTGTGTCTACCAGCACCACAACTTCAATAGGAACTGATAGCTCT
ACCACCACCAGCGGTCAGGATAGATCCATTGATTCAGCGGTTCTGCAAAC
TATACGAATGCTGGCCACGGTAACGTCCAAGACTTCCGAAAACCCCAATG
CCGAGGTACTCCTCAACCTAATGAACAACACCCTAATCGAAGATCGCGAG
CAACAAAAGCTGAAGGAAAAGCTTGACGCTCGCAAGAAGTTCATTGCAAT
TGATCGCAATCCAGAGCGGAATGTGGCTGAGAACTTGGCCAGCGGCAGTT
CGAGTCCGAGTCGAGAGGTGCAGGAGATAATGGCCACACAGGACGATGCC
GATGCCTACGAAGCAGAGCTAGAGAATCTGGACGACGATGATGACGATGA
GGAAGAAGAGCTGGCAAATTCATCACCGCTCCCGGAAGCTGTTGACGGAA
CATGGCCCATTGTCAAGCTGTCATCCCACTCAGCTGAGCTCCAGAATGCT
GCCCAGATCATGTCCCAGGCGGTGCAGAACACCAACAATGGCAATGTGCC
GCCTACGCTAGGTGGAGGGCACAATAATAACACAAGTGTAGGCAGCAATA
GCAACAACAACACGGCTACAACTCTTAGCACCAGCAACACCAGCAGCAGC
AACAACGCGGGCGGAACATGCGTTGATTCAAGTGGAACTGGAGAGCTAAA
TGCCAAAATGGAACTACTCATAGATCTAGTAAAAGCCCAGTCCAAACAAA
TAAACAAATTGGAGAACGAAGTCAACAAGCTACAAAAGCAGCAAGAAGCG
GCGGCGGCCCTGCATAGCAAACAAGACACTTCATTGGAGCCTAAAAATCT
TAGTCAGCTAGCATATAAAATTGAGATGCAACTGTCCAAGCTAATGGAGC
AGTATCTCAAGCGATATGAAAACGAGCATAAGAAGAAACTGACGGAATTC
TTGGCGGCGCGTGAGAGCCAAAACCGAGAGCTACGTGACTCCGTGCTGCA
GGTACTAAATCAGTATGTCATGAACCACTTTACGGACATTATTGGCAACG
TTCTCAACATGGAACTGCAGCGCCAACTGCTTCCTCGCGTGAATGCCAAC
ATGGATCAGCTCCAAGCCCAAATGCAAGTGGAGATTGTGCAGAAGCTGAG
TGTGTTTGACAAAACGGTGAAGGAGAATATTGCCCAGGTGTGCAAGAGCA
AGCAATTTCTGGATACTTTTGGCAAGTCCGTGTTGATTGGTGTTCAAACC
AGCCTACAAACCGCCTTCATTGAATCTATGAGCAGCACCTTGATTCCAGC
TTATGAGAAGTCCTCGCAGAACATGTTTAAACAACTGCATGACGCTTTCA
GCGTGGGCATAAAAGACTTTATGGTCCAGTTTAACACCTACCTGCAGCAC
ATGCCACAGCCCCAAGCCGGGAGTGGCAATACGGAGGAGATAAACAACAA
GTTGTCCATGCTTAAGCAATTGGTAGAGAGCAGCTTGCACAAGCACCGCA
CTGAACTCACGGACGCCATGCTCGAGACACAAAGAGAAGTGAAGAGCTTA
GAGATTTTGCTGGCGCGTCAGGTACAGGAAACGATCAGAGCAGAGCTACG
CAAGCACATGGAAGCCCAGAACGTGGCAATGCGTTCGCAGGCAGCTACGC
CTGCACCACCTTACGACCTCAGGGACAGCATTAAGCAGCTTTTGATGGCT
GGACAAATCAACAAGGCCTTCCATCAGGCTCTATTGGCCAACGACTTGGG
CCTAGTGGAGTTCACTCTCCGACACACGGACAGCAACCAGGCATTCGCAC
CAGAGGGATGCAGACTGGAGCAAAAGGTTCTACTGTCGCTCATTCAGCAA
ATATCCGCTGACATGACCAATCACAATGAGCTTAAGCAGAGATATCTCAA
CGAGGCACTGTTGGCCATCAATATGGCAGATCCCATTACCCGCGAGCACG
CTCCTAAAGTGCTCACCGAGCTGTATCGCAATTGTCAGCAGTTCATTAAG
AACAGCCCCAAGAATTCGCAGTTCAGCAACGTCCGTCTGCTGATGAAGGC
AATCATAACGTACCGCGATCAGCTAAAAGCAAGCTTTCTAGACCAT
BO10889.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:38:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ge-1-RB | 4065 | CG6181-PB | 1..4062 | 17..4078 | 20310 | 100 | Plus |
Ge-1-RA | 4065 | CG6181-PA | 1..4062 | 17..4078 | 20310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:38:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ge-1-RB | 4932 | CG6181-RB | 330..4391 | 17..4078 | 20310 | 100 | Plus |
Ge-1-RA | 4646 | CG6181-RA | 247..4308 | 17..4078 | 20310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:38:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11097408..11098984 | 2723..1147 | 7885 | 100 | Minus |
2L | 23513712 | 2L | 11095953..11096475 | 3891..3369 | 2615 | 100 | Minus |
2L | 23513712 | 2L | 11099354..11099755 | 892..491 | 2010 | 100 | Minus |
2L | 23513712 | 2L | 11100294..11100559 | 282..17 | 1330 | 100 | Minus |
2L | 23513712 | 2L | 11099042..11099296 | 1146..892 | 1275 | 100 | Minus |
2L | 23513712 | 2L | 11096765..11097006 | 3202..2961 | 1210 | 100 | Minus |
2L | 23513712 | 2L | 11097062..11097301 | 2961..2722 | 1200 | 100 | Minus |
2L | 23513712 | 2L | 11100017..11100225 | 491..283 | 1045 | 100 | Minus |
2L | 23513712 | 2L | 11095691..11095879 | 4078..3890 | 945 | 100 | Minus |
2L | 23513712 | 2L | 11096536..11096703 | 3368..3201 | 840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:38:51 has no hits.
BO10889.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:28 Download gff for
BO10889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6181-RB | 1..4065 | 17..4081 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:13:35 Download gff for
BO10889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ge-1-RB | 300..4369 | 7..4078 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:31 Download gff for
BO10889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ge-1-RA | 252..4304 | 22..4074 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:28 Download gff for
BO10889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6181-RB | 300..4369 | 7..4078 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:58 Download gff for
BO10889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ge-1-RA | 252..4304 | 22..4074 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:58 Download gff for
BO10889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11100017..11100225 | 283..491 | 100 | <- | Minus |
2L | 11100294..11100554 | 22..282 | 100 | | Minus |
2L | 11095695..11095877 | 3892..4074 | 100 | <- | Minus |
2L | 11095953..11096475 | 3369..3891 | 100 | <- | Minus |
2L | 11096536..11096701 | 3203..3368 | 100 | <- | Minus |
2L | 11096765..11097005 | 2962..3202 | 100 | <- | Minus |
2L | 11097062..11097299 | 2724..2961 | 100 | <- | Minus |
2L | 11097408..11098984 | 1147..2723 | 100 | <- | Minus |
2L | 11099042..11099295 | 893..1146 | 100 | <- | Minus |
2L | 11099354..11099754 | 492..892 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:31 Download gff for
BO10889.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11100017..11100225 | 283..491 | 100 | <- | Minus |
arm_2L | 11095695..11095877 | 3892..4074 | 100 | <- | Minus |
arm_2L | 11100294..11100554 | 22..282 | 100 | | Minus |
arm_2L | 11095953..11096475 | 3369..3891 | 100 | <- | Minus |
arm_2L | 11096536..11096701 | 3203..3368 | 100 | <- | Minus |
arm_2L | 11096765..11097005 | 2962..3202 | 100 | <- | Minus |
arm_2L | 11097062..11097299 | 2724..2961 | 100 | <- | Minus |
arm_2L | 11097408..11098984 | 1147..2723 | 100 | <- | Minus |
arm_2L | 11099042..11099295 | 893..1146 | 100 | <- | Minus |
arm_2L | 11099354..11099754 | 492..892 | 100 | <- | Minus |
BO10889.pep Sequence
Translation from 16 to 4096
> BO10889.pep
MLIALFALAHLPIFRKTPLSASSSPPPSVHRSPRCGKASTAYHPPPADAC
ISITASAIDAASGMSNSAEQDKPIAANGNAAEPQEIEVIHFQAQEKQCCR
VIRSNKTKVLTSGGVHTRGSSKVKLKNIVDYKWERKYYYPGHLVAVHRDG
KHLAYAINVNNKATGMEGMVRVCNIATSMRALIKGMSGEVLDLQFAHTDC
ERILAVIDVSSLFVYKVDQIEGNLLCNLVLKVEDPIANYVPEYDMVSWCP
YVCSSSATVPINDDDDENQLLIWSRSSQFQCFQVKMIVSEHGRGKIQPAA
LESGYLKIEEDSLITCAALSPDGTTVAAACADGLVRFYQIYLFDVRNHRC
LHEWKPHDGKKVCSLFFLDNINKPVEESYWQHVITTSDANTEIKLWNCSL
WKCLQTINVVASPSSLQPRNFIAGIDRSANYLVLSCLDSLAVYVMQIGST
GGADSENRSSDSEGEGCDTSKRIQNVAEFKLSSGILSFSIVNASMRRVKN
SIESYYPIEEPDDFDDDSNSTSALVLHMFVVQAKSLQECQIIYQPCVAEK
TERSSLNSKRSQTPEDNLLIKEEPESPNSGTVGAVQLDALFAKSAKRAST
GSSSAMVAVAAAAAAAPSAILQDATKEAAKSESPQLSSAYTQQVNLMTPD
AFSASGTAAAAAVFVSTSTTTSIGTDSSTTTSGQDRSIDSAVLQTIRMLA
TVTSKTSENPNAEVLLNLMNNTLIEDREQQKLKEKLDARKKFIAIDRNPE
RNVAENLASGSSSPSREVQEIMATQDDADAYEAELENLDDDDDDEEEELA
NSSPLPEAVDGTWPIVKLSSHSAELQNAAQIMSQAVQNTNNGNVPPTLGG
GHNNNTSVGSNSNNNTATTLSTSNTSSSNNAGGTCVDSSGTGELNAKMEL
LIDLVKAQSKQINKLENEVNKLQKQQEAAAALHSKQDTSLEPKNLSQLAY
KIEMQLSKLMEQYLKRYENEHKKKLTEFLAARESQNRELRDSVLQVLNQY
VMNHFTDIIGNVLNMELQRQLLPRVNANMDQLQAQMQVEIVQKLSVFDKT
VKENIAQVCKSKQFLDTFGKSVLIGVQTSLQTAFIESMSSTLIPAYEKSS
QNMFKQLHDAFSVGIKDFMVQFNTYLQHMPQPQAGSGNTEEINNKLSMLK
QLVESSLHKHRTELTDAMLETQREVKSLEILLARQVQETIRAELRKHMEA
QNVAMRSQAATPAPPYDLRDSIKQLLMAGQINKAFHQALLANDLGLVEFT
LRHTDSNQAFAPEGCRLEQKVLLSLIQQISADMTNHNELKQRYLNEALLA
INMADPITREHAPKVLTELYRNCQQFIKNSPKNSQFSNVRLLMKAIITYR
DQLKASFLDH
BO10889.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ge-1-PB | 1354 | CG6181-PB | 1..1354 | 1..1354 | 6859 | 100 | Plus |
Ge-1-PA | 1354 | CG6181-PA | 1..1354 | 1..1354 | 6859 | 100 | Plus |
mamo-PC | 799 | CG45477-PC | 146..444 | 594..893 | 196 | 28.5 | Plus |
mamo-PD | 1087 | CG45477-PD | 146..444 | 594..893 | 196 | 28.5 | Plus |
mamo-PE | 1087 | CG45477-PE | 146..444 | 594..893 | 196 | 28.5 | Plus |