Clone BO10901 Report

Search the DGRC for BO10901

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:109
Well:1
Vector:pDNR-Dual
Associated Gene/Transcriptblw-RA
Protein status:BO10901.pep: validated full length
Sequenced Size:1690

Clone Sequence Records

BO10901.3prime Sequence

910 bp (776 high quality bases) assembled on 2006-04-19

> BO10901.3prime
ATGGTCTAGAAAGCTTGCACCCTGGAAGGTGGACATGAACTTGGCAACAA
TGTCCTTCAGCTTGGCATCGGACGCCTCCGAGATAGCACCGTCCTTGGCG
ATGGTGTCGAGCAGAGCCTGCTCGGAGGTCTTGATGTGCTGCAAGAACTC
CTTCTCGAACTTGGTGATCTTGGCGGGATCCATCTTGTCCAGATGACCGC
GCACACCGCAGTAGATAACGGCGACCTGATCCTCAATGGCCATGGGCACG
TACTGACCCTGCTTGAGCAGCTCAGTGAGGCGCACACCACGGTTCAGCAG
CTGCTGGGTGGCGGCATCCAGATCGGAACCGAACTGGGCGAAGGCAGCGA
CCTCACGGTACTGGGCCAACTCCAGCTTCATGGAACCGGCCACCTGCTTC
ATGGCCTTGGTCTGGGCAGCGGAACCCACACGGGACACGGACAGACCGAC
GTTAATGGCAGGGCGGATACCCTTGTAGAACAACTCGGTCTCCAAGAAGA
TCTGTCCGTCGGTAATCGAGATGACGTTGGTTGGAATGTAGGCGGACACA
TCGCCAGCCTGGGTCTCGATCACGGGCAGAGCAGTCAGGGAACCGCCTCC
CATGGCGGGGGACATCTTGGCGGCACGCTCCAGCAGACGCGAATGCAGGT
AGAACACATCACCGGGGTAGGCCTCACGACCTGGGGGACGACGCAGCAAC
AGGGACATCTGACGGTAGGCCACAGCCTGCTTGGACAAATCATCGTAGAT
GATCAGGGCGTGCTTGCCCTTGTCGCGGAAGTACTCTCCCATGGCGCATC
CGGAGTAGGGGGCCAAGTACTGCAGAGGAGCAGCGTCGGAGGCGGTGGCC
GACACGATCACGGAGTAGCCCATGGCGCCGGAGTCGGTCAGACGCTTCAC
GATCTGGGCG

BO10901.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3612-PA 1659 blw-RA 765..1656 910..19 4460 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:44:34
Subject Length Description Subject Range Query Range Score Percent Strand
blw-RA 2252 CG3612-RA 870..1761 910..19 4460 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22800686..22801372 910..224 3435 100 Minus
2R 25286936 2R 22801480..22801689 228..19 1050 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:44:30 has no hits.

BO10901.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:31 Download gff for BO10901.3prime
Subject Subject Range Query Range Percent Splice Strand
blw-PA 765..1659 15..910 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:42 Download gff for BO10901.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3612-PA 765..1659 15..910 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:22:55 Download gff for BO10901.3prime
Subject Subject Range Query Range Percent Splice Strand
blw-RA 870..1771 6..910 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:58:53 Download gff for BO10901.3prime
Subject Subject Range Query Range Percent Splice Strand
blw-RA 870..1771 6..910 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:58:53 Download gff for BO10901.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22800686..22801370 226..910 100 -> Minus
2R 22801483..22801699 6..225 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:22:55 Download gff for BO10901.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18688191..18688875 226..910 100 -> Minus
arm_2R 18688988..18689204 6..225 97   Minus

BO10901.5prime Sequence

899 bp (851 high quality bases) assembled on 2006-04-19

> BO10901.5prime
GAAGTTATCAGTCGACATGTCGATTTTTTCCGCCCGCCTGGCGTCCTCGG
TCGCCCGTAACCTGCCCAAGGCTGCCAACCAGGTCGCCTGCAAAGCCGCT
TATCCCGCCGCCAGTCTTGCTGCCCGCAAGCTCCATGTGGCCAGCACGCA
GCGTAGCGCTGAGATCTCCAACATCCTGGAGGAGCGCATCCTGGGCGTCG
CCCCCAAGGCTGATCTGGAGGAAACCGGCCGTGTGCTGAGCATCGGTGAC
GGTATCGCCCGTGTCTACGGTCTGAACAACATCCAGGCCGATGAGATGGT
GGAGTTCTCCTCCGGACTGAAGGGCATGGCCCTTAACTTGGAGCCCGACA
ACGTCGGTGTTGTGGTCTTCGGTAACGATAAGCTGATCAAGCAGGGCGAT
ATCGTCAAGCGTACCGGTGCCATCGTGGATGTGCCCGTCGGTGATGAGCT
GCTGGGTCGCGTCGTCGATGCCCTGGGAAATGCCATCGACGGCAAGGGTG
CCATCAACACCAAGGACCGTTTCCGTGTGGGAATCAAGGCCCCCGGCATC
ATCCCCCGTGTGTCCGTGCGCGAGCCCATGCAGACCGGTATCAAGGCCGT
CGACTCCCTGGTGCCCATCGGTCGTGGTCAGCGTGAGCTGATCATTGGCG
ATCGTCAGACTGGTAAGACCGCTCTGGCCATCGACACCATCATCAACCAG
AAGCGCTTCAACGAGGCCCAGGACGAGTCCAAGAAGCTGTACTGCATCTA
CGTCGCCATTGGCCAGAAGCGTTCCACCGTCGCCCAGATCGTGAAGCGTC
TGACCGACTCCGGCGCCATGGGCTACTCCGTGATCGTGTCGGCCACCGCC
TCCGACGCTGCTCCTCTGCAGTACTTGGCCCCCTACTCCGGATGCGCCA

BO10901.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG3612-PA 1659 blw-RA 1..883 17..899 4415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 04:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
blw-RA 2252 CG3612-RA 106..988 17..899 4415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 04:56:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22799893..22800476 80..663 2920 100 Plus
2R 25286936 2R 22800568..22800804 663..899 1185 100 Plus
2R 25286936 2R 22799204..22799271 17..84 340 100 Plus
Blast to na_te.dros performed on 2015-02-10 04:56:57 has no hits.

BO10901.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:32 Download gff for BO10901.5prime
Subject Subject Range Query Range Percent Splice Strand
blw-PA 1..882 17..898 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:43 Download gff for BO10901.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3612-PA 1..882 17..898 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:48:14 Download gff for BO10901.5prime
Subject Subject Range Query Range Percent Splice Strand
blw-RA 98..987 9..898 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 07:25:48 Download gff for BO10901.5prime
Subject Subject Range Query Range Percent Splice Strand
blw-RA 98..987 9..898 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 07:25:48 Download gff for BO10901.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22799196..22799269 9..82 94 -> Plus
2R 22799896..22800476 83..663 100 -> Plus
2R 22800569..22800803 664..898 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:48:14 Download gff for BO10901.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18686701..18686774 9..82 94 -> Plus
arm_2R 18687401..18687981 83..663 100 -> Plus
arm_2R 18688074..18688308 664..898 100   Plus

BO10901.complete Sequence

1690 bp (1690 high quality bases) assembled on 2006-03-25

GenBank Submission: FJ631916

> BO10901.complete
GAAGTTATCAGTCGACATGTCGATTTTTTCCGCCCGCCTGGCGTCCTCGG
TCGCCCGTAACCTGCCCAAGGCTGCCAACCAGGTCGCCTGCAAAGCCGCT
TATCCCGCCGCCAGTCTTGCTGCCCGCAAGCTCCATGTGGCCAGCACGCA
GCGTAGCGCTGAGATCTCCAACATCCTGGAGGAGCGCATCCTGGGCGTCG
CCCCCAAGGCTGATCTGGAGGAAACCGGCCGTGTGCTGAGCATCGGTGAC
GGTATCGCCCGTGTCTACGGTCTGAACAACATCCAGGCCGATGAGATGGT
GGAGTTCTCCTCCGGACTGAAGGGCATGGCCCTTAACTTGGAGCCCGACA
ACGTCGGTGTTGTGGTCTTCGGTAACGATAAGCTGATCAAGCAGGGCGAT
ATCGTCAAGCGTACCGGTGCCATCGTGGATGTGCCCGTCGGTGATGAGCT
GCTGGGTCGCGTCGTCGATGCCCTGGGAAATGCCATCGACGGCAAGGGTG
CCATCAACACCAAGGACCGTTTCCGTGTGGGAATCAAGGCCCCCGGCATC
ATCCCCCGTGTGTCCGTGCGCGAGCCCATGCAGACCGGTATCAAGGCCGT
CGACTCCCTGGTGCCCATCGGTCGTGGTCAGCGTGAGCTGATCATTGGCG
ATCGTCAGACTGGTAAGACCGCTCTGGCCATCGACACCATCATCAACCAG
AAGCGCTTCAACGAGGCCCAGGACGAGTCCAAGAAGCTGTACTGCATCTA
CGTCGCCATTGGCCAGAAGCGTTCCACCGTCGCCCAGATCGTGAAGCGTC
TGACCGACTCCGGCGCCATGGGCTACTCCGTGATCGTGTCGGCCACCGCC
TCCGACGCTGCTCCTCTGCAGTACTTGGCCCCCTACTCCGGATGCGCCAT
GGGAGAGTACTTCCGCGACAAGGGCAAGCACGCCCTGATCATCTACGATG
ATTTGTCCAAGCAGGCTGTGGCCTACCGTCAGATGTCCCTGTTGCTGCGT
CGTCCCCCAGGTCGTGAGGCCTACCCCGGTGATGTGTTCTACCTGCATTC
GCGTCTGCTGGAGCGTGCCGCCAAGATGTCCCCCGCCATGGGAGGCGGTT
CCCTGACTGCTCTGCCCGTGATCGAGACCCAGGCTGGCGATGTGTCCGCC
TACATTCCAACCAACGTCATCTCGATTACCGACGGACAGATCTTCTTGGA
GACCGAGTTGTTCTACAAGGGTATCCGCCCTGCCATTAACGTCGGTCTGT
CCGTGTCCCGTGTGGGTTCCGCTGCCCAGACCAAGGCCATGAAGCAGGTG
GCCGGTTCCATGAAGCTGGAGTTGGCCCAGTACCGTGAGGTCGCTGCCTT
CGCCCAGTTCGGTTCCGATCTGGATGCCGCCACCCAGCAGCTGCTGAACC
GTGGTGTGCGCCTCACTGAGCTGCTCAAGCAGGGTCAGTACGTGCCCATG
GCCATTGAGGATCAGGTCGCCGTTATCTACTGCGGTGTGCGCGGTCATCT
GGACAAGATGGATCCCGCCAAGATCACCAAGTTCGAGAAGGAGTTCTTGC
AGCACATCAAGACCTCCGAGCAGGCTCTGCTCGACACCATCGCCAAGGAC
GGTGCTATCTCGGAGGCGTCCGATGCCAAGCTGAAGGACATTGTTGCCAA
GTTCATGTCCACCTTCCAGGGTGCAAGCTTTCTAGACCAT

BO10901.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:44:36
Subject Length Description Subject Range Query Range Score Percent Strand
blw-RA 1659 CG3612-PA 1..1656 17..1672 8280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:44:37
Subject Length Description Subject Range Query Range Score Percent Strand
blw-RA 2252 CG3612-RA 106..1761 17..1672 8280 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:44:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22800568..22801372 663..1467 4025 100 Plus
2R 25286936 2R 22799893..22800476 80..663 2920 100 Plus
2R 25286936 2R 22801480..22801689 1463..1672 1050 100 Plus
2R 25286936 2R 22799204..22799271 17..84 340 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:44:35 has no hits.

BO10901.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:48:55 Download gff for BO10901.complete
Subject Subject Range Query Range Percent Splice Strand
blw-RA 1..1659 17..1676 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:20:17 Download gff for BO10901.complete
Subject Subject Range Query Range Percent Splice Strand
blw-RA 143..1816 9..1685 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:44 Download gff for BO10901.complete
Subject Subject Range Query Range Percent Splice Strand
blw-RA 106..1761 17..1674 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:48:55 Download gff for BO10901.complete
Subject Subject Range Query Range Percent Splice Strand
blw-RA 143..1816 9..1685 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:29:41 Download gff for BO10901.complete
Subject Subject Range Query Range Percent Splice Strand
blw-RA 106..1761 17..1674 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:29:41 Download gff for BO10901.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22799204..22799269 17..82 100 -> Plus
2R 22799896..22800476 83..663 100 -> Plus
2R 22800569..22801370 664..1465 100 -> Plus
2R 22801483..22801689 1466..1674 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:44 Download gff for BO10901.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18686709..18686774 17..82 100 -> Plus
arm_2R 18687401..18687981 83..663 100 -> Plus
arm_2R 18688074..18688875 664..1465 100 -> Plus
arm_2R 18688988..18689194 1466..1674 99   Plus

BO10901.pep Sequence

Translation from 16 to 1690

> BO10901.pep
MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEI
SNILEERILGVAPKADLEETGRVLSIGDGIARVYGLNNIQADEMVEFSSG
LKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGDELLGRVV
DALGNAIDGKGAINTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP
IGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKKLYCIYVAIGQ
KRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFR
DKGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER
AAKMSPAMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY
KGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGS
DLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMDP
AKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTF
QGASFLDH

BO10901.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:31:17
Subject Length Description Subject Range Query Range Score Percent Strand
blw-PA 552 CG3612-PA 1..552 1..552 2737 100 Plus
Vha55-PC 490 CG17369-PC 63..390 103..425 265 25.5 Plus
Vha55-PA 490 CG17369-PA 63..390 103..425 265 25.5 Plus
Vha55-PB 490 CG17369-PB 63..390 103..425 265 25.5 Plus
ATPsyn-beta-PC 511 CG11154-PC 1..390 3..416 252 22.8 Plus