Clone Sequence Records
BO10904.3prime Sequence
896 bp (795 high quality bases) assembled on 2006-04-19
> BO10904.3prime
ATGGTCTAGAAAGCTTGCGGGATTGCTTCTACTGCTGCAGCTGGTCACCG
AATTGTTGCTGCTGCTCTTGCCGCCCTTGTTACTGGCGGCAGTGTTGCAG
CATGTGGTTGTGGAGGAGATGCCGCTCCTGGCCCCCGTCTCATCGCCCTC
ATCGCCCAGGTACTCGTCCGGCTTGTGACTAGAGGCGGGAGGCGTCAGAA
GACTTTCGGGAGCGCGCAGCGCGGTGGCCGGGGAAGCTTGAATCCTAGCG
CGCATGGCATGCGCCGCATCCTGGGCCATAAGCACTTCGTCATACATATC
CATGGTAGTTGTGTGCGTTTGGATAATGTGCGAGTCGTCGGTGACAATAT
TGGGGCAGATTAGTCCCAGGCCAAATTTGTTGCTGACTTGCTCATTCTGC
TCGTTCAGCTGCAGGTAGGGGGCCTTCTGGGAGATCACTCGGAAGAATGG
CTCCATCCAGCGAGCACAAGGCTGAATCACCTGCCAATCCAGACCAGAAC
AGCGTAAAGCCATCTCCCGACTAAATGTATGACTGATGGCGGCCGCTGCC
AGCACCGAGTAGGAATAGTTGGCCATGCCCACGTCCAGGGTGCACAGATC
TAGCAGCTGTGAGGTTTGCACAAACTCAAAGCCAGAGAATTGCGGGTAGA
TAAAGGCATCGTCCGCCTCCGCGCTCTTTTGCCTGCCAATCTGGGAGAAC
GAGGCCGGAGTGCGGTTGTTCACATTCAGTTGCATATAGACGCCCAGCCA
GCCGGTAATGGTGATGGGGCTGATGTCCCAGTCGAGCGCCTGCAGCAGAA
TCTTCTCGTGGTTAAGGATGTCCCGCTCTGTGCAGGCGCCATCCGTCACA
TAAGCAAACTCCCCGATCTTTGGCGGATAAATCTCCTCTACCTTGG
BO10904.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3938-PC | 2130 | CycE-RC | 1250..2127 | 896..19 | 4390 | 100 | Minus |
| CG3938-PA | 2130 | CycE-RA | 1250..2127 | 896..19 | 4390 | 100 | Minus |
| CG3938-PE | 2130 | CycE-RE | 1250..2127 | 896..19 | 4390 | 100 | Minus |
| CG3938-PD | 2130 | CycE-RD | 1250..2127 | 896..19 | 4390 | 100 | Minus |
| CG3938-PB | 1809 | CycE-RB | 929..1806 | 896..19 | 4390 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycE-RF | 3363 | CG3938-RF | 1386..2263 | 896..19 | 4390 | 100 | Minus |
| CycE-RB | 3856 | CG3938-RB | 1676..2553 | 896..19 | 4390 | 100 | Minus |
| CycE-RD | 3946 | CG3938-RD | 1766..2643 | 896..19 | 4390 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 13:02:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15729565..15729944 | 517..896 | 1900 | 100 | Plus |
| 2L | 23513712 | 2L | 15728884..15729156 | 19..291 | 1365 | 100 | Plus |
| 2L | 23513712 | 2L | 15729273..15729500 | 291..518 | 1140 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 13:02:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1067..1181 | 130..22 | 156 | 62.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6852 | 130..24 | 145 | 62.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6820 | 113..23 | 144 | 66 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6841 | 130..23 | 144 | 59.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6873 | 130..24 | 143 | 66.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2423 | 130..53 | 138 | 64.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6956 | 130..19 | 138 | 60.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2883..2976 | 113..19 | 131 | 62.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2399 | 136..23 | 127 | 60 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2366 | 83..23 | 125 | 67.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2848 | 122..24 | 125 | 61.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1517..1577 | 86..23 | 124 | 68.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2725..2856 | 186..55 | 118 | 59.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6798 | 100..24 | 115 | 61 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2491 | 130..33 | 112 | 57.1 | Minus |
BO10904.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:37 Download gff for
BO10904.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3938-PA | 1250..2130 | 16..896 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:49 Download gff for
BO10904.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3938-PB | 929..1809 | 16..896 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 10:32:57 Download gff for
BO10904.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RD | 1766..2652 | 11..896 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:30:06 Download gff for
BO10904.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RD | 1766..2652 | 11..896 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:30:06 Download gff for
BO10904.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15729566..15729944 | 518..896 | 100 | | Plus |
| 2L | 15728885..15729156 | 20..291 | 100 | <- | Plus |
| 2L | 15729274..15729499 | 292..517 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 10:32:57 Download gff for
BO10904.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15728885..15729156 | 20..291 | 100 | <- | Plus |
| arm_2L | 15729274..15729499 | 292..517 | 100 | <- | Plus |
| arm_2L | 15729566..15729944 | 518..896 | 100 | | Plus |
BO10904.5prime Sequence
935 bp (837 high quality bases) assembled on 2006-04-19
> BO10904.5prime
GAAGTTATCAGTCGACATGGGTTTAAATGCCAAGAGTGTTTGTTCTACCA
GCAGCACTGAGCCAAATGGCAGCATAGTCACAACCGCCCCCAGCAACGGA
GAAGTGAGCAGCAGCATAGTCGTCGTCGTCAGCAGCAGTAGTATCAGTAG
CAGCAGCGATAGCCCAATCGCTATCCTTCCACATCCAGATCCAATCCCAT
CAACATCGTTCTCTTCAGCGTCGCAACGAAGTGAAGAGGAGCTACCAGGA
ACCTCAGCAGCCTCCAGAACCGACGAGATGTGCTCTTGTGATAGCCAGAA
TCTTGCAGCATCCACAGCCGCGACTTCCAATGGCAATAAACGTAAACGGC
GTTTAAGCAGCGATTCAAACGAGGACCCTGAACTCGGTTTTGAGCCTCCA
TCAGCTAAGCGCCAGCAGCGACTGCCCGCTTTGTACGGCAGCGAGCAGGG
CAATCTGTCATCGGTTGCCTCCTCGGTCTACACCTCGCCCGTTGTCTCGG
TTGATGGCCAGAGTACCCAGGAGCTGCTCAGCATACGTAGCTCACCGGCC
GAGGATCTGTCGGAGGCGCCACACAGTCCGCTGCCGGACAGCCCGGACAG
TCCGCCGAGTCCGGATCGTGGAAGCAAGCAGACGCCAGTGGTGGTGCGCT
ACGCTGCGGAGCAGGTGGTGACCAGTACGGTGGTCACGCAGAAGACGGAG
GATGATGACCTTTTGGACGACAGCTGCGAGGACTACTCGTACGACGAGGA
TGATGAGGATGACGTTGAGGAGGAGGACGACGACGTGGAGATCTACTCCT
CCACAATTTCTCCAGCCTCCTCCGGCTGCAGCCAGCAGCAGGCGGTGAAT
GGAGAGCGTACTCCCCGGGCTGCAAAACATCAGGAGCAGATCCATCATCC
GGTCAGTGACCTGATGATTAACATGCGGACGCCCA
BO10904.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3938-PC | 2130 | CycE-RC | 1..849 | 17..865 | 4245 | 100 | Plus |
| CG3938-PA | 2130 | CycE-RA | 1..849 | 17..865 | 4245 | 100 | Plus |
| CG3938-PE | 2130 | CycE-RE | 1..849 | 17..865 | 4245 | 100 | Plus |
| CG3938-PD | 2130 | CycE-RD | 1..849 | 17..865 | 4245 | 100 | Plus |
| CG3938-PB | 1809 | CycE-RB | 36..528 | 373..865 | 2465 | 100 | Plus |
| CG3938-PC | 2130 | CycE-RC | 857..919 | 873..935 | 315 | 100 | Plus |
| CG3938-PA | 2130 | CycE-RA | 857..919 | 873..935 | 315 | 100 | Plus |
| CG3938-PE | 2130 | CycE-RE | 857..919 | 873..935 | 315 | 100 | Plus |
| CG3938-PD | 2130 | CycE-RD | 857..919 | 873..935 | 315 | 100 | Plus |
| CG3938-PB | 1809 | CycE-RB | 536..598 | 873..935 | 315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:56:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycE-RD | 3946 | CG3938-RD | 517..1435 | 17..935 | 4535 | 99.7 | Plus |
| CycE-RE | 3703 | CG3938-RE | 274..1192 | 17..935 | 4535 | 99.7 | Plus |
| CycE-RA | 3653 | CG3938-RA | 427..1345 | 17..935 | 4535 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:56:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15730275..15730838 | 935..372 | 2730 | 98.9 | Minus |
| 2L | 23513712 | 2L | 15737627..15737966 | 374..35 | 1700 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 21:56:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..7016 | 44..350 | 200 | 56.1 | Plus |
BO10904.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:38 Download gff for
BO10904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3938-PE | 1..918 | 17..934 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:51 Download gff for
BO10904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3938-PE | 1..918 | 17..934 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:52:46 Download gff for
BO10904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RA | 427..1344 | 17..934 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:55:11 Download gff for
BO10904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RA | 427..1344 | 17..934 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:55:11 Download gff for
BO10904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15730276..15730836 | 374..934 | 99 | <- | Minus |
| 2L | 15737628..15737964 | 37..373 | 100 | <- | Minus |
| 2L | 15740772..15740791 | 17..36 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:52:46 Download gff for
BO10904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15730276..15730836 | 374..934 | 99 | <- | Minus |
| arm_2L | 15737628..15737964 | 37..373 | 100 | <- | Minus |
| arm_2L | 15740772..15740791 | 17..36 | 100 | | Minus |
BO10904.complete Sequence
2161 bp (2161 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631917
> BO10904.complete
GAAGTTATCAGTCGACATGGGTTTAAATGCCAAGAGTGTTTGTTCTACCA
GCAGCACTGAGCCAAATGGCAGCATAGTCACAACCGCCCCCAGCAACGGA
GAAGTGAGCAGCAGCATAGTCGTCGTCGTCAGCAGCAGTAGTATCAGTAG
CAGCAGCGATAGCCCAATCGCTATCCTTCCACATCCAGATCCAATCCCAT
CAACATCGTTCTCTTCAGCGTCGCAACGAAGTGAAGAGGAGCTACCAGGA
ACCTCAGCAGCCTCCAGAACCGACGAGATGTGCTCTTGTGATAGCCAGAA
TCTTGCAGCATCCACAGCCGCGACTTCCAATGGCAATAAACGTAAACGGC
GTTTAAGCAGCGATTCAAACGAGGACCCTGAACTCGGTTTTGAGCCTCCA
TCAGCTAAGCGCCAGCAGCGACTGCCCGCTTTGTACGGCAGCGAGCAGGG
CAATCTGTCATCGGTTGCCTCCTCGGTCTACACCTCGCCCGTTGTCTCGG
TTGATGGCCAGAGTACCCAGGAGCTGCTCAGCATACGTAGCTCACCGGCC
GAGGATCTGTCGGAGGCGCCACACAGTCCGCTGCCGGACAGCCCGGACAG
TCCGCCGAGTCCGGATCGTGGAAGCAAGCAGACGCCAGTGGTGGTGCGCT
ACGCTGCGGAGCAGGTGGTGACCAGTACGGTGGTCACGCAGAAGACGGAG
GATGATGACCTTTTGGACGACAGCTGCGAGGACTACTCGTACGACGAGGA
TGATGAGGATGACGTTGAGGAGGAGGACGACGACGTGGAGATCTACTCCT
CCACAATTTCTCCAGCCTCCTCCGGCTGCAGCCAGCAGCAGGCGGTGAAT
GGAGAGCGTACTCCCGGCCTGCCAAAACATCAGGAGCAGATCCATCATCC
GGTCAGTGACCTGATGATTAACATGCGGACGCCCATGTCGCCGGCTGTGG
AGAACGGTCTGCGCCAGTGCCCACTTCCTGCGCTCGCCTGGGCTAACGCC
GCCGATGTTTGGCGCCTGATGTGTCACCGGGATGAGCAGGACTCGCGTCT
GCGCAGCATTTCGATGCTGGAACAGCATCCCGGACTGCAACCACGTATGC
GTGCCATTCTCTTGGACTGGTTGATCGAGGTCTGTGAAGTTTACAAGCTG
CATCGGGAGACCTTCTACTTGGCCGTCGACTACCTGGATCGCTATTTGCA
TGTGGCGCATAAGGTGCAAAAGACGCACTTGCAGTTGATCGGCATCACCT
GCCTGTTTGTGGCCGCCAAGGTAGAGGAGATTTATCCGCCAAAGATCGGG
GAGTTTGCTTATGTGACGGATGGCGCCTGCACAGAGCGGGACATCCTTAA
CCACGAGAAGATTCTGCTGCAGGCGCTCGACTGGGACATCAGCCCCATCA
CCATTACCGGCTGGCTGGGCGTCTATATGCAACTGAATGTGAACAACCGC
ACTCCGGCCTCGTTCTCCCAGATTGGCAGGCAAAAGAGCGCGGAGGCGGA
CGATGCCTTTATCTACCCGCAATTCTCTGGCTTTGAGTTTGTGCAAACCT
CACAGCTGCTAGATCTGTGCACCCTGGACGTGGGCATGGCCAACTATTCC
TACTCGGTGCTGGCAGCGGCCGCCATCAGTCATACATTTAGTCGGGAGAT
GGCTTTACGCTGTTCTGGTCTGGATTGGCAGGTGATTCAGCCTTGTGCTC
GCTGGATGGAGCCATTCTTCCGAGTGATCTCCCAGAAGGCCCCCTACCTG
CAGCTGAACGAGCAGAATGAGCAAGTCAGCAACAAATTTGGCCTGGGACT
AATCTGCCCCAATATTGTCACCGACGACTCGCACATTATCCAAACGCACA
CAACTACCATGGATATGTATGACGAAGTGCTTATGGCCCAGGATGCGGCG
CATGCCATGCGCGCTAGGATTCAAGCTTCCCCGGCCACCGCGCTGCGCGC
TCCCGAAAGTCTTCTGACGCCTCCCGCCTCTAGTCACAAGCCGGACGAGT
ACCTGGGCGATGAGGGCGATGAGACGGGGGCCAGGAGCGGCATCTCCTCC
ACAACCACATGCTGCAACACTGCCGCCAGTAACAAGGGCGGCAAGAGCAG
CAGCAACAATTCGGTGACCAGCTGCAGCAGTAGAAGCAATCCCGCAAGCT
TTCTAGACCAT
BO10904.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycE-RD | 2130 | CG3938-PD | 1..2127 | 17..2143 | 10620 | 100 | Plus |
| CycE-RE | 2130 | CG3938-PE | 1..2127 | 17..2143 | 10620 | 100 | Plus |
| CycE-RA | 2130 | CG3938-PA | 1..2127 | 17..2143 | 10620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:30:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycE-RD | 3946 | CG3938-RD | 517..2643 | 17..2143 | 10620 | 100 | Plus |
| CycE-RE | 3703 | CG3938-RE | 274..2400 | 17..2143 | 10620 | 100 | Plus |
| CycE-RA | 3653 | CG3938-RA | 427..2553 | 17..2143 | 10620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:29:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15729565..15730838 | 1645..372 | 6355 | 99.9 | Minus |
| 2L | 23513712 | 2L | 15737627..15737966 | 374..35 | 1700 | 100 | Minus |
| 2L | 23513712 | 2L | 15728884..15729156 | 2143..1871 | 1365 | 100 | Minus |
| 2L | 23513712 | 2L | 15729273..15729500 | 1871..1644 | 1140 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1067..1181 | 2032..2140 | 156 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6852 | 2032..2138 | 145 | 62.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6820 | 2049..2139 | 144 | 66 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6841 | 2032..2139 | 144 | 59.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6873 | 2032..2138 | 143 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2423 | 2032..2109 | 138 | 64.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6845..6956 | 2032..2143 | 138 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2883..2976 | 2049..2143 | 131 | 62.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2399 | 2026..2139 | 127 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2848 | 2040..2138 | 125 | 61.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2366 | 2079..2139 | 125 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1517..1577 | 2076..2139 | 124 | 68.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6798 | 2062..2138 | 115 | 61 | Plus |
BO10904.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:17 Download gff for
BO10904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RE | 1..2130 | 17..2146 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:53:35 Download gff for
BO10904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RE | 279..2405 | 17..2145 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:03 Download gff for
BO10904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RA | 427..2553 | 17..2145 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:17 Download gff for
BO10904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RE | 279..2414 | 17..2151 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:19:21 Download gff for
BO10904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycE-RA | 427..2553 | 17..2145 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:19:21 Download gff for
BO10904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15728881..15729156 | 1871..2145 | 99 | <- | Minus |
| 2L | 15729274..15729499 | 1645..1870 | 100 | <- | Minus |
| 2L | 15729566..15730836 | 374..1644 | 99 | <- | Minus |
| 2L | 15737628..15737964 | 37..373 | 100 | <- | Minus |
| 2L | 15740772..15740791 | 17..36 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:03 Download gff for
BO10904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15728881..15729156 | 1871..2145 | 99 | <- | Minus |
| arm_2L | 15729274..15729499 | 1645..1870 | 100 | <- | Minus |
| arm_2L | 15737628..15737964 | 37..373 | 100 | <- | Minus |
| arm_2L | 15740772..15740791 | 17..36 | 100 | | Minus |
| arm_2L | 15729566..15730836 | 374..1644 | 99 | <- | Minus |
BO10904.pep Sequence
Translation from 16 to 2161
> BO10904.pep
MGLNAKSVCSTSSTEPNGSIVTTAPSNGEVSSSIVVVVSSSSISSSSDSP
IAILPHPDPIPSTSFSSASQRSEEELPGTSAASRTDEMCSCDSQNLAAST
AATSNGNKRKRRLSSDSNEDPELGFEPPSAKRQQRLPALYGSEQGNLSSV
ASSVYTSPVVSVDGQSTQELLSIRSSPAEDLSEAPHSPLPDSPDSPPSPD
RGSKQTPVVVRYAAEQVVTSTVVTQKTEDDDLLDDSCEDYSYDEDDEDDV
EEEDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDLM
INMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISM
LEQHPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKV
QKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKIL
LQALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGRQKSAEADDAFIY
PQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAISHTFSREMALRCS
GLDWQVIQPCARWMEPFFRVISQKAPYLQLNEQNEQVSNKFGLGLICPNI
VTDDSHIIQTHTTTMDMYDEVLMAQDAAHAMRARIQASPATALRAPESLL
TPPASSHKPDEYLGDEGDETGARSGISSTTTCCNTAASNKGGKSSSNNSV
TSCSSRSNPASFLDH
BO10904.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:52:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycE-PD | 709 | CG3938-PD | 1..709 | 1..709 | 3672 | 100 | Plus |
| CycE-PE | 709 | CG3938-PE | 1..709 | 1..709 | 3672 | 100 | Plus |
| CycE-PA | 709 | CG3938-PA | 1..709 | 1..709 | 3672 | 100 | Plus |
| CycE-PC | 709 | CG3938-PC | 1..709 | 1..709 | 3672 | 100 | Plus |
| CycE-PF | 712 | CG3938-PF | 9..712 | 6..709 | 3644 | 99.9 | Plus |
