Clone Sequence Records
BO10906.3prime Sequence
951 bp (846 high quality bases) assembled on 2006-04-19
> BO10906.3prime
ATGGTCTAGAAAGCTTGCGCTAAGGCGTATTTTCGATGCCAGAAAATACA
GCTGCAGGCAGGTGGTCAGCATGACCGTCATATTGCCAATGGCGATGGTC
ATGTGAATGCGCCGGAATCCCTTGTGGATGCGCTGATAGTGCGGGCAGTC
GACGAGGTCGCCCTGGACAAGGCTGCCCACCTCCTGGCCACTGCCGATCG
CATCCTCGATCCTGTACTTCTCGTGCATCAGCTGCAGCATCGGTGGCACC
AGGTACAGGCGCACCACCACCTCAATTCCCGCCGCCAGGGCCAGCGATCC
CATCTGGATGCCCGCCGATGTCGTCCATCCGCTGAGGAAATACTTGGCAT
ACACCACCAGCATCGTCAGACTGAGCATGGCGTTCAGGGCGAAGTAGCGC
GGGAAGAGGATCTGCTGGCACTGCCCGAAAACGTGGCGGGGCAGAGAGAA
ATACAGCGAGAGTCCCGAGACAAATGTCATCCAGATCTGAGACCCAAAGT
GGGTGGCAAAGGCGCCCAGGAAGACCAAGGCCGCCATAACTCCGCCCGTT
GCTGTTCTCGTCGATGCTGCTGTTGCAGACGCTGCTGCTTCTGCTGTTGC
CACCGTTGTCGTTGGGTCGATGAGGTCGCGTCCCACAGTCATCAGCACAA
AGGCCAAGATGCAAACAGCTATCAAGTGTGCTGGCTGTGTCGTACGCGTC
AGAATTGTGTACAGGCGACTGGCCTGCAGCTTGGCCACCAGGCAGGTGAT
TCGCTCGGACACCTGCCTAGTCATCTGGGTGCCGATGGCCAGGGCGTCGT
CCATTGACGGCTCCATGGAGCTCAGCTTGCGCTGCTGTTGAGCCTTCANG
GCGGCGGCGGGCGTGCTGGTGGCCAAAGGCTCCTCCTCCTGCACTCCATC
TCCTTGAGCATCTGCTGCTGCTGCTCCTGCTGCAGCTTGCGAAATCGCGG
G
BO10906.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32512-PA | 1311 | CG32512-RA | 434..1308 | 893..19 | 4331 | 99.7 | Minus |
| CG32512-PA | 1311 | CG32512-RA | 375..433 | 951..893 | 295 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:02:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32512-RD | 2322 | CG32512-RD | 696..1629 | 951..19 | 4619 | 99.7 | Minus |
| CG32512-RA | 2215 | CG32512-RA | 696..1629 | 951..19 | 4619 | 99.7 | Minus |
| CG32512-RC | 1412 | CG32512-RC | 136..826 | 709..19 | 3455 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:02:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21062970..21063416 | 19..465 | 2235 | 100 | Plus |
| X | 23542271 | X | 21063801..21064043 | 464..706 | 1215 | 100 | Plus |
| X | 23542271 | X | 21066600..21066845 | 707..951 | 1154 | 98.8 | Plus |
Blast to na_te.dros performed 2015-02-10 20:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2390 | 614..546 | 167 | 73.9 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1076..1144 | 608..540 | 156 | 69.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6857 | 614..548 | 155 | 70.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6815 | 614..530 | 154 | 65.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6698..6781 | 630..546 | 152 | 65.9 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1093..1162 | 618..546 | 151 | 69.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2582..2666 | 640..555 | 148 | 65.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6828 | 614..553 | 148 | 71 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6818 | 614..548 | 145 | 70 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2752..2832 | 626..548 | 139 | 67.1 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1099..1151 | 600..548 | 139 | 73.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6827..6898 | 614..546 | 137 | 68.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2360 | 601..546 | 136 | 71.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2432 | 614..549 | 131 | 68.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2762..2817 | 603..548 | 127 | 69.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2369 | 611..546 | 125 | 68.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1112 | 599..548 | 125 | 71.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1040..1121 | 614..530 | 121 | 64 | Minus |
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 508..567 | 621..563 | 117 | 68.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1589 | 614..561 | 116 | 70.2 | Minus |
BO10906.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:41 Download gff for
BO10906.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-PA | 375..1311 | 15..951 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:55 Download gff for
BO10906.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-PA | 375..1311 | 15..951 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:41:15 Download gff for
BO10906.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 696..1633 | 14..951 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:46:55 Download gff for
BO10906.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 696..1633 | 14..951 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:46:55 Download gff for
BO10906.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21062966..21063415 | 14..464 | 99 | <- | Plus |
| X | 21063802..21064043 | 465..706 | 100 | <- | Plus |
| X | 21066600..21066845 | 707..951 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:41:15 Download gff for
BO10906.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20933993..20934442 | 14..464 | 99 | <- | Plus |
| arm_X | 20934829..20935070 | 465..706 | 100 | <- | Plus |
| arm_X | 20937627..20937872 | 707..951 | 98 | | Plus |
BO10906.5prime Sequence
901 bp (822 high quality bases) assembled on 2006-04-19
> BO10906.5prime
GAAGTTATCAGTCGACATGTGCCACAATTCAGGGATCGTGGAGAAAAACA
ACGAGCAGCAGATCGAGCGCTACATGGCCTGTGGGATGCCATCGAAGGCG
GTGAAGAGTGTCAAGTACACGCTGAAGAAGCGCGAGAAGAAGGAGCAGCA
GCGGAGAGATCTGGAAAAGGATCTGCACAGGGAACAGCAGTTCCTTGAGG
AACTCGAGCTAAGCAGTAGCGCCAGCGACTCCTCCTCCTCCTCCTCGTCC
TCCTCGGTCACCGGCAGCGATAGCGAGGATAGCGGCGTTACCGAAACCGT
TTTGAAATCGTCGCCGTCGGCGGATATGACAACCAGTCCAAAGGTCATCT
CACCGGCCCCCACACCCAGAAGCGACCTCTTACGATTCTGCCCGCGATTT
CGCAAGCTGCAGCAGGAGCAGCAGCAGCAGATGCTCAAGGAGATGGAGTT
GCAGGAGGAGGAGCCCTTGGCCACCAGCACGCCCGCCGCCGCCCTGAAGG
CTCAACAGCAGCGCAAGCTGAGCTCCATGGAGCCGTCAATGGACGACGCC
CTGGCCATCGGCACCCAGATGACTAGGCAGGTGTCCGAGCGAATCACCTG
CCTGGTGGCCAAGCTGCAGGCCAGTCGCCTGTACACAATTCTGACGCGTA
CGACACAGCCAGCACACTTGATAGCTGTTTGCATCTTGGCCTTTGTGCTG
ATGACTGTGGGACGCGACCTCATCGACCCAACGACAACGGTGGCAACAGC
AGAAGCAGCAGCGTCTGCAACAGCAGCATCGACGAGAACAGCAACGGGCG
GAGTTATGGCGGCCTTGGTCTTCCTGGGCGCCTTTGCCACCCACTTTGGG
TCTCAGATCTGGATGACATTTGTCTCGGGACTCTCGCTGTATTTCTCTCT
G
BO10906.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:12:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32512-PA | 1311 | CG32512-RA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:35:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32512-RD | 2322 | CG32512-RD | 322..1206 | 17..901 | 4425 | 100 | Plus |
| CG32512-RA | 2215 | CG32512-RA | 322..1206 | 17..901 | 4425 | 100 | Plus |
| CG32512-RC | 1412 | CG32512-RC | 136..403 | 634..901 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:35:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21066600..21067219 | 636..17 | 3100 | 100 | Minus |
| X | 23542271 | X | 21063801..21064043 | 879..637 | 1215 | 100 | Minus |
Blast to na_te.dros performed 2015-02-12 04:35:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2390 | 729..797 | 167 | 73.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1076..1144 | 735..803 | 156 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6857 | 729..795 | 155 | 70.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6815 | 729..813 | 154 | 65.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6698..6781 | 713..797 | 152 | 65.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1093..1162 | 725..797 | 151 | 69.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2582..2666 | 703..788 | 148 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6828 | 729..790 | 148 | 71 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6818 | 729..795 | 145 | 70 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2752..2832 | 717..795 | 139 | 67.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1099..1151 | 743..795 | 139 | 73.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6827..6898 | 729..797 | 137 | 68.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2360 | 742..797 | 136 | 71.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2432 | 729..794 | 131 | 68.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2762..2817 | 740..795 | 127 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2369 | 732..797 | 125 | 68.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1112 | 744..795 | 125 | 71.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1040..1121 | 729..813 | 121 | 64 | Plus |
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 508..567 | 722..780 | 117 | 68.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1589 | 729..782 | 116 | 70.2 | Plus |
BO10906.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:52:42 Download gff for
BO10906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-PA | 1..885 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:10:57 Download gff for
BO10906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-PA | 1..885 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:47:36 Download gff for
BO10906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 322..1206 | 17..901 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:03:40 Download gff for
BO10906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 322..1206 | 17..901 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:03:40 Download gff for
BO10906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21063393..21063415 | 879..901 | 100 | <- | Minus |
| X | 21063802..21064043 | 637..878 | 100 | <- | Minus |
| X | 21066600..21067219 | 17..636 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:47:36 Download gff for
BO10906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20934420..20934442 | 879..901 | 100 | <- | Minus |
| arm_X | 20934829..20935070 | 637..878 | 100 | <- | Minus |
| arm_X | 20937627..20938246 | 17..636 | 100 | | Minus |
BO10906.complete Sequence
1342 bp (1342 high quality bases) assembled on 2006-03-25
GenBank Submission: FJ631919
> BO10906.complete
GAAGTTATCAGTCGACATGTGCCACAATTCAGGGATCGTGGAGAAAAACA
ACGAGCAGCAGATCGAGCGCTACATGGCCTGTGGGATGCCATCGAAGGCG
GTGAAGAGTGTCAAGTACACGCTGAAGAAGCGCGAGAAGAAGGAGCAGCA
GCGGAGAGATCTGGAAAAGGATCTGCACAGGGAACAGCAGTTCCTTGAGG
AACTCGAGCTAAGCAGTAGCGCCAGCGACTCCTCCTCCTCCTCCTCGTCC
TCCTCGGTCACCGGCAGCGATAGCGAGGATAGCGGCGTTACCGAAACCGT
TTTGAAATCGTCGCCGTCGGCGGATATGACAACCAGTCCAAAGGTCATCT
CACCGGCCCCCACACCCAGAAGCGACCTCTTACGATTCTGCCCGCGATTT
CGCAAGCTGCAGCAGGAGCAGCAGCAGCAGATGCTCAAGGAGATGGAGTT
GCAGGAGGAGGAGCCCTTGGCCACCAGCACGCCCGCCGCCGCCCTGAAGG
CTCAACAGCAGCGCAAGCTGAGCTCCATGGAGCCGTCAATGGACGACGCC
CTGGCCATCGGCACCCAGATGACTAGGCAGGTGTCCGAGCGAATCACCTG
CCTGGTGGCCAAGCTGCAGGCCAGTCGCCTGTACACAATTCTGACGCGTA
CGACACAGCCAGCACACTTGATAGCTGTTTGCATCTTGGCCTTTGTGCTG
ATGACTGTGGGACGCGACCTCATCGACCCAACGACAACGGTGGCAACAGC
AGAAGCAGCAGCGTCTGCAACAGCAGCATCGACGAGAACAGCAACGGGCG
GAGTTATGGCGGCCTTGGTCTTCCTGGGCGCCTTTGCCACCCACTTTGGG
TCTCAGATCTGGATGACATTTGTCTCGGGACTCTCGCTGTATTTCTCTCT
GCCCCGCCACGTTTTCGGGCAGTGCCAGCAGATCCTCTTCCCGCGCTACT
TCGCCCTGAACGCCATGCTCAGTCTGACGATGCTGGTGGTGTATGCCAAG
TATTTCCTCAGCGGATGGACGACATCGGCGGGCATCCAGATGGGATCGCT
GGCCCTGGCGGCGGGAATTGAGGTGGTGGTGCGCCTGTACCTGGTGCCAC
CGATGCTGCAGCTGATGCACGAGAAGTACAGGATCGAGGATGCGATCGGC
AGTGGCCAGGAGGTGGGCAGCCTTGTCCAGGGCGACCTCGTCGACTGCCC
GCACTATCAGCGCATCCACAAGGGATTCCGGCGCATTCACATGACCATCG
CCATTGGCAATATGACGGTCATGCTGACCACCTGCCTGCAGCTGTATTTT
CTGGCATCGAAAATACGCCTTAGCGCAAGCTTTCTAGACCAT
BO10906.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:44:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32512-RD | 1311 | CG32512-PD | 1..1308 | 17..1324 | 6540 | 100 | Plus |
| CG32512-RA | 1311 | CG32512-PA | 1..1308 | 17..1324 | 6540 | 100 | Plus |
| CG32512-RC | 702 | CG32512-PC | 9..699 | 634..1324 | 3455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32512-RD | 2322 | CG32512-RD | 322..1629 | 17..1324 | 6540 | 100 | Plus |
| CG32512-RA | 2215 | CG32512-RA | 322..1629 | 17..1324 | 6540 | 100 | Plus |
| CG32512-RC | 1412 | CG32512-RC | 136..826 | 634..1324 | 3455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21066600..21067219 | 636..17 | 3100 | 100 | Minus |
| X | 23542271 | X | 21062970..21063416 | 1324..878 | 2235 | 100 | Minus |
| X | 23542271 | X | 21063801..21064043 | 879..637 | 1215 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 00:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2390 | 729..797 | 167 | 73.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1076..1144 | 735..803 | 156 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..6857 | 729..795 | 155 | 70.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6815 | 729..813 | 154 | 65.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6698..6781 | 713..797 | 152 | 65.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1093..1162 | 725..797 | 151 | 69.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2582..2666 | 703..788 | 148 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6828 | 729..790 | 148 | 71 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6818 | 729..795 | 145 | 70 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2752..2832 | 717..795 | 139 | 67.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1099..1151 | 743..795 | 139 | 73.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6827..6898 | 729..797 | 137 | 68.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2360 | 742..797 | 136 | 71.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2432 | 729..794 | 131 | 68.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2762..2817 | 740..795 | 127 | 69.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2369 | 732..797 | 125 | 68.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1112 | 744..795 | 125 | 71.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1040..1121 | 729..813 | 121 | 64 | Plus |
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 508..567 | 722..780 | 117 | 68.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1533..1589 | 729..782 | 116 | 70.2 | Plus |
BO10906.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:48:41 Download gff for
BO10906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 1..1311 | 17..1328 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:19:58 Download gff for
BO10906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 304..1615 | 17..1329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:58:42 Download gff for
BO10906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 322..1629 | 17..1326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:48:42 Download gff for
BO10906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 304..1615 | 17..1329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:25:54 Download gff for
BO10906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32512-RA | 322..1629 | 17..1326 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:25:54 Download gff for
BO10906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21062968..21063415 | 879..1326 | 99 | <- | Minus |
| X | 21063802..21064043 | 637..878 | 100 | <- | Minus |
| X | 21066600..21067219 | 17..636 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:58:42 Download gff for
BO10906.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20933995..20934442 | 879..1326 | 99 | <- | Minus |
| arm_X | 20934829..20935070 | 637..878 | 100 | <- | Minus |
| arm_X | 20937627..20938246 | 17..636 | 100 | | Minus |
BO10906.pep Sequence
Translation from 16 to 1342
> BO10906.pep
MCHNSGIVEKNNEQQIERYMACGMPSKAVKSVKYTLKKREKKEQQRRDLE
KDLHREQQFLEELELSSSASDSSSSSSSSSVTGSDSEDSGVTETVLKSSP
SADMTTSPKVISPAPTPRSDLLRFCPRFRKLQQEQQQQMLKEMELQEEEP
LATSTPAAALKAQQQRKLSSMEPSMDDALAIGTQMTRQVSERITCLVAKL
QASRLYTILTRTTQPAHLIAVCILAFVLMTVGRDLIDPTTTVATAEAAAS
ATAASTRTATGGVMAALVFLGAFATHFGSQIWMTFVSGLSLYFSLPRHVF
GQCQQILFPRYFALNAMLSLTMLVVYAKYFLSGWTTSAGIQMGSLALAAG
IEVVVRLYLVPPMLQLMHEKYRIEDAIGSGQEVGSLVQGDLVDCPHYQRI
HKGFRRIHMTIAIGNMTVMLTTCLQLYFLASKIRLSASFLDH
BO10906.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32512-PD | 436 | CG32512-PD | 1..436 | 1..436 | 2183 | 100 | Plus |
| CG32512-PA | 436 | CG32512-PA | 1..436 | 1..436 | 2183 | 100 | Plus |
| CG32512-PC | 233 | CG32512-PC | 4..233 | 207..436 | 1163 | 100 | Plus |
| CG32512-PB | 208 | CG32512-PB | 1..208 | 229..436 | 1055 | 100 | Plus |
