Clone BO10920 Report

Search the DGRC for BO10920

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:109
Well:20
Vector:pDNR-Dual
Associated Gene/TranscriptKlp10A-RA
Protein status:BO10920.pep: validated full length
Sequenced Size:2449

Clone Sequence Records

BO10920.3prime Sequence

888 bp (856 high quality bases) assembled on 2006-04-19

> BO10920.3prime
ATGGTCTAGAAAGCTTGCACGCTTGCCATTCGGCGAATTGAAGCTGCACG
ACAGCATCTCCTCCTTGGCCAACTTGGCGCGATATTCGGCCATCATGTCG
CGGCACTGGATGGCGATGTCCAGCAGCTGCGAGAACATCGACTCGCCCCG
TTTGCAGTACGAGTCCTGGTCGTAGTCCACATAGTTGGTCAGATTGTACA
GCGCCTTCGACTCGGCGAGGAAGGTCTCCAGTGTGGCATTAACGGTGCGA
TGATACTCCACCACCATCTCCTCCGTCTGCTGCAGGTCGTCGATGGCCTG
GTGCTGCACAATCAGCTCGTCGGACATCTCGTGTTCGCTCAGCGAACTCA
GCATGGCCAGGTCCATGTTGCCGGCGTTTCCGTTCTTGTTGTTGTTATTA
TTATTGTTGTGAATGACCGCCCCCGAGTGATGAGAGGCCGGAGCACGCTG
ATTATTCGACTGGCTGGCCGGTGCATGCGAATTGGGATGCAGCTGATGCG
AGTGCGGATGCACCATGTTGAGCTCCTCCTCCTCCTCGTCGTCCGTGATC
TCGATGGGCTCGGTGTCGCCGCCAGGGCAAACTTCGACGATATCCTTGAC
CACCAGCTCCTTGACACGATCCGCATAGCGCAGCGTGTTGAGCGTGTGCT
CGCAGGAGCTAAGTCCCGGCGAGATCATGGCTATCATGCACGTCTTGCTC
TTCTCGCCAATGAACGAGTCGCGCAGCACCTGGGTGAGTTTGGAGACACG
GAAGGGCAAGTGGGCCGACTGTTTGCCCAACGCACGAATGCACTCCTTGA
GGGCCAGCAGCGATTTGTTAATCTCGGCACCCTCCATACGCGTCTGCCGA
TCGGCCGAGGAAGTGTCCACGCCCCGCTCATTGCCCCG

BO10920.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG1453-PA 2418 Klp10A-RA 1548..2415 886..19 4340 100 Minus
CG1453-PE 2418 Klp10A-RE 1548..2415 886..19 4340 100 Minus
CG1453-PD 2418 Klp10A-RD 1548..2415 886..19 4340 100 Minus
CG1453-PB 2418 Klp10A-RB 1548..2415 886..19 4340 100 Minus
CG1453-PC 2418 Klp10A-RC 1548..2415 886..19 4340 100 Minus
CG12192-PA 2190 Klp59D-RA 1468..1517 834..785 150 92 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:05:57
Subject Length Description Subject Range Query Range Score Percent Strand
Klp10A-RF 4467 CG1453-RF 1979..2846 886..19 4340 100 Minus
Klp10A-RC 4543 CG1453-RC 2055..2922 886..19 4340 100 Minus
Klp10A-RB 4754 CG1453-RB 2266..3133 886..19 4340 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:05:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11132550..11133100 336..886 2755 100 Plus
X 23542271 X 11130983..11131300 19..336 1590 100 Plus
2R 25286936 2R 23124349..23124603 608..859 355 76.9 Plus
2R 25286936 2R 23143581..23143802 886..668 355 78.4 Minus
Blast to na_te.dros performed 2015-02-10 22:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2633..2676 410..367 130 77.3 Minus

BO10920.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:53:09 Download gff for BO10920.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1453-PA 1547..2418 18..888 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:11:36 Download gff for BO10920.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1453-PC 1547..2418 18..888 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:54:47 Download gff for BO10920.3prime
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RD 1886..2759 11..888 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:58:33 Download gff for BO10920.3prime
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RB 2265..3138 11..888 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:58:33 Download gff for BO10920.3prime
Subject Subject Range Query Range Percent Splice Strand
X 11130978..11131300 11..336 98 <- Plus
X 11132551..11133101 337..888 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:54:47 Download gff for BO10920.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11025011..11025333 11..336 98 <- Plus
arm_X 11026584..11027134 337..888 99   Plus

BO10920.5prime Sequence

881 bp (757 high quality bases) assembled on 2006-04-19

> BO10920.5prime
GAAGTTATCAGTCGACATGGACATGATTACGGTGGGGCAGAGCGTCAAGA
TCAAGCGGACGGATGGCCGCGTCCACATGGCCGTGGTGGCGGTGATCAAC
CAGTCGGGCAAGTGCATCACAGTCGAATGGTACGAGCGCGGCGAAACGAA
GGGCAAGGAGGTAGAACTGGACGCCATACTCACGCTCAATCCGGAGCTAA
TGCAAGATACTGTCGAACAGCACGCCGCCCCGGAGCCCAAGAAACAAGCC
ACCGCGCCGATGAACCTCTCGCGTAATCCCACACAATCGGCTATCGGTGG
CAATCTCACCAGCCGTATGACCATGGCCGGAAACATGCTGAACAAGATCC
AGGAAAGCCAGTCGATTCCCAATCCGATTGTCAGCAGCAATAGCGTGAAT
ACAAACAGCAACTCCAACACTACGGCCGGCGGAGGTGGTGGCACCACAAC
GTCGACGACCACTGGATTACAGCGTCCACGGTACTCGCAAGCTGCTACCG
GCCAGCAGCAGACAAGGATCGCCTCGGCGGTGCCTAATAACACATTGCCC
AATCCCAGCGCGGCAGCCAGTGCTGGTCCGGCGGCACAAGGAGTCGCCAC
TGCGGCCACAACCCAGGGAGCTGGCGGCGCTAGTACCCGGCGATCGCACG
CATTGAAAGAGGTGGAGCGACTGAAGGAGAATCGCGAGAAGCGACGCGCC
CGACAGGCCGAGATGAAGGAGGAGAAGGTGGCGCTGATGAACCAGGATCC
GGGCAATCCAAACTGGGAGACGGCGCANATGATACGCGAATATCAGAGCA
CGCTGGAATTTGTGCCGCTGCTCGATGGCCAGGCCGTCGATGACCATCAG
ATCACAGTGTGCGTGCGCAAGCGTCCCATTA

BO10920.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG1453-PA 2418 Klp10A-RA 1..865 17..881 4306 99.8 Plus
CG1453-PE 2418 Klp10A-RE 1..865 17..881 4306 99.8 Plus
CG1453-PD 2418 Klp10A-RD 1..865 17..881 4306 99.8 Plus
CG1453-PB 2418 Klp10A-RB 1..865 17..881 4306 99.8 Plus
CG1453-PC 2418 Klp10A-RC 1..865 17..881 4306 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:48:41
Subject Length Description Subject Range Query Range Score Percent Strand
Klp10A-RF 4467 CG1453-RF 431..1296 16..881 4319 99.9 Plus
Klp10A-RC 4543 CG1453-RC 507..1372 16..881 4319 99.9 Plus
Klp10A-RB 4754 CG1453-RB 718..1583 16..881 4319 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11135052..11135917 881..16 4319 99.9 Minus
Blast to na_te.dros performed on 2015-02-10 21:48:38 has no hits.

BO10920.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:53:10 Download gff for BO10920.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1453-PA 1..864 17..880 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:11:37 Download gff for BO10920.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1453-PC 1..864 17..880 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:52:22 Download gff for BO10920.5prime
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RD 334..1203 10..880 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:43:39 Download gff for BO10920.5prime
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RB 713..1582 10..880 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:43:39 Download gff for BO10920.5prime
Subject Subject Range Query Range Percent Splice Strand
X 11135053..11135922 10..880 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:52:22 Download gff for BO10920.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11029086..11029955 10..880 99   Minus

BO10920.complete Sequence

2449 bp (2449 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631923

> BO10920.complete
GAAGTTATCAGTCGACATGGACATGATTACGGTGGGGCAGAGCGTCAAGA
TCAAGCGGACGGATGGCCGCGTCCACATGGCCGTGGTGGCGGTGATCAAC
CAGTCGGGCAAGTGCATCACAGTCGAATGGTACGAGCGCGGCGAAACGAA
GGGCAAGGAGGTAGAACTGGACGCCATACTCACGCTCAATCCGGAGCTAA
TGCAAGATACTGTCGAACAGCACGCCGCCCCGGAGCCCAAGAAACAAGCC
ACCGCGCCGATGAACCTCTCGCGTAATCCCACACAATCGGCTATCGGTGG
CAATCTCACCAGCCGTATGACCATGGCCGGAAACATGCTGAACAAGATCC
AGGAAAGCCAGTCGATTCCCAATCCGATTGTCAGCAGCAATAGCGTGAAT
ACAAACAGCAACTCCAACACTACGGCCGGCGGAGGTGGTGGCACCACAAC
GTCGACGACCACTGGATTACAGCGTCCACGGTACTCGCAAGCTGCTACCG
GCCAGCAGCAGACAAGGATCGCCTCGGCGGTGCCTAATAACACATTGCCC
AATCCCAGCGCGGCAGCCAGTGCTGGTCCGGCGGCACAAGGAGTCGCCAC
TGCGGCCACAACCCAGGGAGCTGGCGGCGCTAGTACCCGGCGATCGCACG
CATTGAAAGAGGTGGAGCGACTGAAGGAGAATCGCGAGAAGCGACGCGCC
CGACAGGCCGAGATGAAGGAGGAGAAGGTGGCGCTGATGAACCAGGATCC
GGGCAATCCAAACTGGGAGACGGCGCAAATGATACGCGAATATCAGAGCA
CGCTGGAATTTGTGCCGCTGCTCGATGGCCAGGCCGTCGATGACCATCAG
ATCACAGTGTGCGTGCGCAAGCGTCCCATTAGCCGCAAGGAGGTCAATCG
CAAGGAGATCGATGTCATTTCGGTGCCGCGCAAGGACATGCTCATCGTGC
ACGAGCCGCGCAGCAAGGTCGACCTCACCAAGTTCCTGGAGAACCACAAG
TTTCGCTTCGACTACGCCTTCAACGACACGTGCGACAATGCCATGGTATA
CAAATACACAGCCAAGCCGTTGGTGAAAACCATTTTCGAGGGCGGAATGG
CGACGTGCTTCGCCTACGGCCAGACGGGATCGGGCAAAACGCACACCATG
GGCGGTGAGTTTAATGGAAAGGTGCAGGACTGCAAGAACGGCATCTACGC
CATGGCGGCCAAGGATGTCTTTGTGACCCTGAATATGCCGCGTTACCGCG
CCATGAATCTAGTCGTCTCGGCCAGTTTCTTTGAGATTTACAGTGGCAAG
GTCTTCGATCTTCTGTCCGACAAGCAGAAACTGCGCGTCCTGGAGGATGG
TAAACAGCAAGTGCAGGTGGTGGGACTCACCGAGAAGGTGGTCGATGGCG
TCGAGGAGGTACTGAAGCTCATCCAGCACGGCAATGCTGCCCGAACATCC
GGCCAGACGTCGGCCAACTCCAATTCGTCGCGTTCGCACGCCGTTTTCCA
GATTGTGCTGCGGCCGCAGGGCTCGACGAAGATCCATGGCAAGTTCTCGT
TCATCGATCTGGCGGGCAATGAGCGGGGCGTGGACACTTCCTCGGCCGAT
CGGCAGACGCGTATGGAGGGTGCCGAGATTAACAAATCGCTGCTGGCCCT
CAAGGAGTGCATTCGTGCGTTGGGCAAACAGTCGGCCCACTTGCCCTTCC
GTGTCTCCAAACTCACCCAGGTGCTGCGCGACTCGTTCATTGGCGAGAAG
AGCAAGACGTGCATGATAGCCATGATCTCGCCGGGACTTAGCTCCTGCGA
GCACACGCTCAACACGCTGCGCTATGCGGATCGTGTCAAGGAGCTGGTGG
TCAAGGATATCGTCGAAGTTTGCCCTGGCGGCGACACCGAGCCCATCGAG
ATCACGGACGACGAGGAGGAGGAGGAGCTCAACATGGTGCATCCGCACTC
GCATCAGCTGCATCCCAATTCGCATGCACCGGCCAGCCAGTCGAATAATC
AGCGTGCTCCGGCCTCTCATCACTCGGGGGCGGTCATTCACAACAATAAT
AATAACAACAACAAGAACGGAAACGCCGGCAACATGGACCTGGCCATGCT
GAGTTCGCTGAGCGAACACGAGATGTCCGACGAGCTGATTGTGCAGCACC
AGGCCATCGACGACCTGCAGCAGACGGAGGAGATGGTGGTGGAGTATCAT
CGCACCGTTAATGCCACACTGGAGACCTTCCTCGCCGAGTCGAAGGCGCT
GTACAATCTGACCAACTATGTGGACTACGACCAGGACTCGTACTGCAAAC
GGGGCGAGTCGATGTTCTCGCAGCTGCTGGACATCGCCATCCAGTGCCGC
GACATGATGGCCGAATATCGCGCCAAGTTGGCCAAGGAGGAGATGCTGTC
GTGCAGCTTCAATTCGCCGAATGGCAAGCGTGCAAGCTTTCTAGACCAT

BO10920.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:49:37
Subject Length Description Subject Range Query Range Score Percent Strand
Klp10A-RF 2418 CG1453-PF 1..2415 17..2431 12075 100 Plus
Klp10A-RC 2418 CG1453-PC 1..2415 17..2431 12075 100 Plus
Klp10A-RB 2418 CG1453-PB 1..2415 17..2431 12075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:49:39
Subject Length Description Subject Range Query Range Score Percent Strand
Klp10A-RF 4467 CG1453-RF 431..2846 16..2431 12080 100 Plus
Klp10A-RC 4543 CG1453-RC 507..2922 16..2431 12080 100 Plus
Klp10A-RB 4754 CG1453-RB 718..3133 16..2431 12080 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:49:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11134880..11135917 1053..16 5190 100 Minus
X 23542271 X 11132550..11133365 2114..1299 4080 100 Minus
X 23542271 X 11130983..11131300 2431..2114 1590 100 Minus
X 23542271 X 11133438..11133686 1302..1054 1245 100 Minus
2R 25286936 2R 23124349..23124865 1842..1329 430 73.6 Minus
2R 25286936 2R 23143555..23143802 1538..1782 380 77.8 Plus
2R 25286936 2R 23142958..23143220 944..1206 370 76 Plus
2R 25286936 2R 23125036..23125218 1161..979 240 75.4 Minus
Blast to na_te.dros performed 2014-11-27 08:49:36
Subject Length Description Subject Range Query Range Score Percent Strand
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2633..2676 2040..2083 130 77.3 Plus

BO10920.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:56:21 Download gff for BO10920.complete
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RD 1..2418 17..2432 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:13:24 Download gff for BO10920.complete
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RD 226..2651 10..2439 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:13:37 Download gff for BO10920.complete
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RD 340..2754 17..2433 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:56:21 Download gff for BO10920.complete
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RD 226..2651 10..2439 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:27:07 Download gff for BO10920.complete
Subject Subject Range Query Range Percent Splice Strand
Klp10A-RB 719..3133 17..2433 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:27:07 Download gff for BO10920.complete
Subject Subject Range Query Range Percent Splice Strand
X 11130981..11131300 2114..2433 99 <- Minus
X 11132551..11133363 1301..2113 100 <- Minus
X 11133440..11133686 1054..1300 100 <- Minus
X 11134880..11135916 17..1053 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:13:37 Download gff for BO10920.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11025014..11025333 2114..2433 99 <- Minus
arm_X 11026584..11027396 1301..2113 100 <- Minus
arm_X 11027473..11027719 1054..1300 100 <- Minus
arm_X 11028913..11029949 17..1053 100   Minus

BO10920.pep Sequence

Translation from 16 to 2449

> BO10920.pep
MDMITVGQSVKIKRTDGRVHMAVVAVINQSGKCITVEWYERGETKGKEVE
LDAILTLNPELMQDTVEQHAAPEPKKQATAPMNLSRNPTQSAIGGNLTSR
MTMAGNMLNKIQESQSIPNPIVSSNSVNTNSNSNTTAGGGGGTTTSTTTG
LQRPRYSQAATGQQQTRIASAVPNNTLPNPSAAASAGPAAQGVATAATTQ
GAGGASTRRSHALKEVERLKENREKRRARQAEMKEEKVALMNQDPGNPNW
ETAQMIREYQSTLEFVPLLDGQAVDDHQITVCVRKRPISRKEVNRKEIDV
ISVPRKDMLIVHEPRSKVDLTKFLENHKFRFDYAFNDTCDNAMVYKYTAK
PLVKTIFEGGMATCFAYGQTGSGKTHTMGGEFNGKVQDCKNGIYAMAAKD
VFVTLNMPRYRAMNLVVSASFFEIYSGKVFDLLSDKQKLRVLEDGKQQVQ
VVGLTEKVVDGVEEVLKLIQHGNAARTSGQTSANSNSSRSHAVFQIVLRP
QGSTKIHGKFSFIDLAGNERGVDTSSADRQTRMEGAEINKSLLALKECIR
ALGKQSAHLPFRVSKLTQVLRDSFIGEKSKTCMIAMISPGLSSCEHTLNT
LRYADRVKELVVKDIVEVCPGGDTEPIEITDDEEEEELNMVHPHSHQLHP
NSHAPASQSNNQRAPASHHSGAVIHNNNNNNNKNGNAGNMDLAMLSSLSE
HEMSDELIVQHQAIDDLQQTEEMVVEYHRTVNATLETFLAESKALYNLTN
YVDYDQDSYCKRGESMFSQLLDIAIQCRDMMAEYRAKLAKEEMLSCSFNS
PNGKRASFLDH

BO10920.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
Klp10A-PF 805 CG1453-PF 1..805 1..805 4131 100 Plus
Klp10A-PC 805 CG1453-PC 1..805 1..805 4131 100 Plus
Klp10A-PB 805 CG1453-PB 1..805 1..805 4131 100 Plus
Klp10A-PD 805 CG1453-PD 1..805 1..805 4131 100 Plus
Klp10A-PE 805 CG1453-PE 1..805 1..805 4131 100 Plus