Clone Sequence Records
BO10925.3prime Sequence
844 bp (843 high quality bases) assembled on 2006-04-19
> BO10925.3prime
ATGGTCTAGAAAGCTTGCAAAGTTATCCAGATCCCGCGATAAGTCGGCCA
GCATCTCCATGAAGAGATGCGACTTGGCCTCGTCTTCGGGACTATCGCCA
GAGGCGTAATGGGCTTCGGAATCCTTTCCGGACAGAGAGAGTTGCTGCAG
AAGTTCGGAAAGCATGCACCACACTTTCGGCGACCAGTTCTCGGCAAAGA
GCGGCATGAAGAGTTCGTTGAGATGATCGGCCCGTATAGCTCCAGACTGT
AGCATGGATCTAAGGATCGTCTCCAGCATCCGAAAGCTGTCCGCACTGTT
TGCCATCTCCTGCACAAAACTAATGCTGATCAAGCCGTCAAAGATTCCGG
GTGAAGCTTTACTGTCCATAAGCTGCTGTGATCGCCACACCGAACAGCTG
GCTGAAATTATATCCTTGTCGAGGAAATTCGGTTTTCTGGTAATGAGCAA
CTGAAGCAAATGAACTAATCCAGACCCAATGAGGTGATAGAAAACAGTGG
GCATTTTAGGCAACAGGACCGCCTTTTGGGCTTTTCGAAGCAGCTCGGCC
AGATCTTCTTGACTGCCCACATATTCTGGCCGCAAGCTGAGGCAGTGCAA
CCACTGCTGGAGCTGATAGAGAAACTCCGACAGGCTGAATCCAATATCCG
GACTGAGCTGGAGCTCACTGGAGCCGCCGCCACCTGCAGCTGCTGCATCT
GCCTTGTTCCTATTGCAGTTGCACACTTTGGTGGCTAACTCCTGAAGGTC
GCCATGATAAAATGTGGACTGAAGCACGCTCGACTGGAGCCACTGTTGCA
GCTGAGTCTGGGCTTGCACCCGGATTAAATGAGCATATGTAGAC
BO10925.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:13:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32315-PA | 3723 | dlt-RA | 2895..3720 | 844..19 | 4130 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:38:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlt-RA | 4000 | CG32315-RA | 3110..3935 | 844..19 | 4130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:38:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1789696..1790521 | 19..844 | 4130 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:38:39 has no hits.
BO10925.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:53:17 Download gff for
BO10925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-PA | 2895..3723 | 15..844 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:11:48 Download gff for
BO10925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32315-PA | 2895..3723 | 15..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:49:15 Download gff for
BO10925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 3110..3942 | 10..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:29 Download gff for
BO10925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 3110..3942 | 10..844 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:29 Download gff for
BO10925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1789689..1790521 | 10..844 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:49:15 Download gff for
BO10925.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1789689..1790521 | 10..844 | 99 | | Plus |
BO10925.5prime Sequence
880 bp (742 high quality bases) assembled on 2006-04-19
> BO10925.5prime
GAAGTTATCAGTCGACATGACTGCAGAGCTCAAAGCGTCAGATACAGAAA
TGACGAAGCCGGAAGAGAGGCATCTGCTGCAGCTGCTTGCGCAACTGGAG
AAGGTGCCGCACCACCAGCTGGAGCAAAAGTTCGTCGCCTATTTTAAAAA
GGTTGGCAAGGGTGATAACCAGAGTAACTGCACACTAGAGGACTTCGCCA
CCTACTTTTTAGGTGCACTGCGTCAAAGCACAAAGAGGTACTACTATTCG
CAAAACTCGGAGACACCCGTGTTTCCCTTGACCCCCATCCATCAGCTCAA
GCCGCCGGTCGCCGATGTGGTCAAGGAGGAGGAACAGCAGCAGCTCAATG
AGTCCTCGATCCTTAGCCGGAGCAGCTGCAGTATGTCCTCCACTTCGAAT
ACTACTCCGGCTCCCCAGCAGCCGCAGGGCAGAAGATCAACGCCAGGAAG
TGGCGCCCAGTTTTGCAGCACGCCTAACAGAAGCGGCGGTGGGGGAGCAG
GAGGAGGGCACAGCATCTGCTTGGGCAACTTTCTGGTCAATACACCTATC
CAGAGCCATCAGCGATCTAAGAAGAAGATCACGCCCCAAAAACAGCAGCA
AAATCAACATGCATCATTGGGTTCAGGAACTGGAGCTGGAGCCACGCCAC
AATCCAAGCCGCGGCGACGTGTCTTACCCATGACCATTAGCAAGAATGTT
TCGGCCAGCTCCTCTTTCGGAGACACCAGTTCCTTTAGCAATGAAAATAA
CTTTTGGCGAATCTCGCAGAGCAGCGAAATCTTCGATAGAAGCCAAGAAG
CAGCCCTGGAAATGGAGGCCCGCAAGTTCCTGTTGCTCAAAAAGCAGGAA
ATCAAAAGCGAAGCGCCTGTGAAATGTAGT
BO10925.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32315-PA | 3723 | dlt-RA | 1..857 | 17..873 | 4285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 13:10:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlt-RA | 4000 | CG32315-RA | 214..1072 | 15..873 | 4295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 13:10:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1792559..1793417 | 873..15 | 4295 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-02 13:10:26 has no hits.
BO10925.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:53:18 Download gff for
BO10925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-PA | 1..864 | 17..880 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:11:50 Download gff for
BO10925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32315-PA | 1..864 | 17..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:07:17 Download gff for
BO10925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 205..1079 | 7..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:46:38 Download gff for
BO10925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 205..1079 | 7..880 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:46:38 Download gff for
BO10925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1792552..1793426 | 7..880 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:07:17 Download gff for
BO10925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1792552..1793426 | 7..880 | 99 | | Minus |
BO10925.complete Sequence
3754 bp assembled on 2008-11-10
GenBank Submission: KX793962
> BO10925.complete
GAAGTTATCAGTCGACATGACTGCAGAGCTCAAAGCGTCAGATACAGAAA
TGACGAAGCCGGAAGAGAGGCATCTGCTGCAGCTGCTTGCGCAACTGGAG
AAGGTGCCGCACCACCAGCTGGAGCAAAAGTTCGTCGCCTATTTTAAAAA
GGTTGGCAAGGGTGATAACCAGAGTAACTGCACACTAGAGGACTTCGCCA
CCTACTTTTTAGGTGCACTGCGTCAAAGCACAAAGAGGTACTACTATTCG
CAAAACTCGGAGACACCCGTGTTTCCCTTGACCCCCATCCATCAGCTCAA
GCCGCCGGTCGCCGATGTGGTCAAGGAGGAGGAACAGCAGCAGCTCAATG
AGTCCTCGATCCTTAGCCGGAGCAGCTGCAGTATGTCCTCCACTTCGAAT
ACTACTCCGGCTCCCCAGCAGCCGCAGGGCAGAAGATCAACGCCAGGAAG
TGGCGCCCAGTTTTGCAGCACGCCTAACAGAAGCGGCGGTGGGGGAGCAG
GAGGAGGGCACAGCATCTGCTTGGGCAACTTTCTGGTCAATACACCTATC
CAGAGCCATCAGCGATCTAAGAAGAAGATCACGCCCCAAAAACAGCAGCA
AAATCAACATGCATCATTGGGTTCAGGAACTGGAGCTGGAGCCACGCCAC
AATCCAAGCCGCGGCGACGTGTCTTACCCATGACCATTAGCAAGAATGTT
TCGGCCAGCTCCTCTTTCGGAGACACCAGTTCCTTTAGCAATGAAAATAA
CTTTTGGCGAATCTCGCAGAGCAGCGAAATCTTCGATAGAAGCCAAGAAG
CAGCCCTGGAAATGGAGGCCCGCAAGTTCCTGTTGCTCAAAAAGCAGGAA
ATCAAAAGCGAAGCGCCTGTGAATGTTAGTCAACAGGAGAGGACACCCGA
AGATGAGGTTTTCCCTGAGGAAGCCATTAGCTTGGAGGGTGTGGCTAATG
CCAATCACTTGCAGCTCCTATCAACCATTTACAGCCTGTTAATGGACCTC
AATTTGGTGCCCAACGTACTACGTGAACTTAGTTTTGTGGTCCATCTGCT
AAATGTGCGAGATTTTGGCCAATCACCCGTCAAATCGTATGTACCCAGTG
CTTTGGAGGGACTCACCCAGCACAAAAGTTGTGTATACTTTGCCGCAAAA
CTGCTGGAGAATCAGAAAAAGTTACTTCTGCAGCTTGACAAACGGACTTT
GAGTGTCTTGCTACAAAACGAGAGATTGAGCCTGCTGCCGCAAGGAGTTG
TCCAAGAATTGGAAACTCACTGTCAGCGGAGGCAGGATTCGACCACACCC
TTCGCTATGGACACCTCTTCGTCCTCCCAGCAGAATGTATACTATCACGT
GGAGAACGACTCGCGGGATAACTTTCCTTCGCAGAATGAGTTCGGGGCCT
TCAAGTCCCAAAGGGACCTCTTTTACAAAGCCCTTAAGCGTTGGGAGGTG
AGCCATCTGAATCGGGGTTTCAACTTTCCCAGCGAACTGGGGCCGCGTAT
TATGGATATCTATAAGAAATCGGAGCACCCAGTTAACATGACGCACCTGG
CAAAATTATTTGTCAACCAATTATTGATCTCCGCTACCGAGACCACCGAA
TCTCCCGAAGAACTGGGCTTAAAGCTGGATCCCCTCAGGCACAATAAGCT
GGCACAGCGCTTGGTGACATCCAGTTCCAGTGTGGAAGGTCAGTTTCCTC
GCTCTCAGGCCTTCTTCCGCGACTTTATCGCCGTATGCTCATCGGTAGCA
TTTCTGGTGCACCTGAAGCTGGAGCTCTTTGTGCAACTAATGCGTAACAA
CGACTCCACCTTTGATCTGCTCCAGCTAACTGACGATGTGGCTGTCGAGG
AGCAGTCCGCTCAGCAGGGACCATACATTGTTCGCGTCCAGACCATGGCT
AACATGCTTATCCTGGCCAAGTTCTTGGGCTACGTAACTGTGATGCCCTT
TAGCGGCACCACGCAACATGGAAACCCAACGCCGCCATATCTTTGTCCAC
AGCAGTTGCAGCTTCGTAACCATTTTCGTCCGGACTTCAATCTCCGCGAG
ATACTCGAACGTTCCATGCGCCAGGGCAAGCTGCTGATTACGCTTCCGTG
GTTAGTTCAATACCTGGCGATGCTCGACTTGGTCAGCCTGCACCTTCCGG
ACGCAGTGGCCACTTTGGAGCTGCTGTACGGATTGTATGCCGACATACGT
ATGGCAAAATTGCAACCAGCAGCTGTGTTCATAGCCAGGAGCTGCATTGG
ATGGCTTTTGGATGCACAGCCGCAGTTGGTTAATGGCTACTACAATTACA
GGGCACAGGAAGCCGGAGTCGGAAGCATTTCGGCAATTGTGGATATCTGC
CTAAAGGACCTCTCGTGTCACGATAAATCGCACGCCCCCTTGTTGGACGA
ACTTCTGCCCGTGGCTTGCCCTTTCCTGCAGGAATTCCGGGTGAGCATCA
CGCCCTCTAGGCAAGCGAAAAGTGGGCGGTTCCGGTACATAACCACTCGG
TTGGAGCAGTTGCAGCAGAACAGCAGTTCCATTTCCAAGGACGCGATAGT
GGCAAGCGAACTGAGTCCCGCGGAGCAGCAGCAGCGCAAATTGGTCGATG
CCTATCTCCAATCCCAAAACGCGTCCACCAGGAGGTTGATCGAGTTCGTC
ACGGAGCGCACTTTTAAGTGTGTCGTTAAGGACGCCCAGCAGGAGATTCT
GCTCCCGTCGAAGGCCTCCGCGGATGCCAAAGTCAACGAAATTAAATCCA
CGATGCTCGAGGAGGTGTTTCAGGAGCTGCATGAGATCTTTCAAGATGCC
AGGGAGAATGCGTGTCAGCGTTGGAAGGAGCATGTGCACCAAATGCTGGA
CAGGCGCATAGAGCACTCCTTGGATGGCCTTCTGCCCTCCAGCACCAATG
CGGTATTGCGGTCTACATATGCTCATTTAATCCGGGTGCAAGCCCAGACT
CAGCTGCAACAGTGGCTCCAGTCGAGCGTGCTTCAGTCCACATTTTATCA
TGGCGACCTTCAGGAGTTAGCCACCAAAGTGTGCAACTGCAATAGGAACA
AGGCAGATGCAGCAGCTGCAGGTGGCGGCGGCTCCAGTGAGCTCCAGCTC
AGTCCGGATATTGGATTCAGCCTGTCGGAGTTTCTCTATCAGCTCCAGCA
GTGGTTGCACTGCCTCAGCTTGCGGCCAGAATATGTGGGCAGTCAAGAAG
ATCTGGCCGAGCTGCTTCGAAAAGCCCAAAAGGCGGTCCTGTTGCCTAAA
ATGCCCACTGTTTTCTATCACCTCATTGGGTCTGGATTAGTTCATTTGCT
TCAGTTGCTCATTACCAGAAAACCGAATTTCCTCGACAAGGATATAATTT
CAGCCAGCTGTTCGGTGTGGCGATCACAGCAGCTTATGGACAGTAAAGCT
TCACCCGGAATCTTTGACGGCTTGATCAGCATTAGTTTTGTGCAGGAGAT
GGCAAACAGTGCGGACAGCTTTCGGATGCTGGAGACGATCCTTAGATCCA
TGCTACAGTCTGGAGCTATACGGGCCGATCATCTCAACGAACTCTTCATG
CCGCTCTTTGCCGAGAACTGGTCGCCGAAAGTGTGGTGCATGCTTTCCGA
ACTTCTGCAGCAACTCTCTCTGTCCGGAAAGGATTCCGAAGCCCATTACG
CCTCTGGCGATAGTCCCGAAGACGAGGCCAAGTCGCATCTCTTCATGGAG
ATGCTGGCCGACTTATCGCGGGATCTGGATAACTTTGCAAGCTTTCTAGA
CCAT
BO10925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:54:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlt-RA | 3723 | CG32315-PA | 1..3720 | 17..3736 | 18600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:54:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlt-RA | 4000 | CG32315-RA | 214..3935 | 15..3736 | 18610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1789696..1793417 | 3736..15 | 18610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:54:08 has no hits.
BO10925.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:49:35 Download gff for
BO10925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 195..3932 | 7..3745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:43:07 Download gff for
BO10925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 216..3935 | 17..3738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:08:38 Download gff for
BO10925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 206..3925 | 17..3738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:33:45 Download gff for
BO10925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 216..3935 | 17..3738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:33:45 Download gff for
BO10925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1789694..1793415 | 17..3738 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:43:07 Download gff for
BO10925.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1789694..1793415 | 17..3738 | 99 | | Minus |
BO10925.pep Sequence
Translation from 16 to 3754
> BO10925.pep
MTAELKASDTEMTKPEERHLLQLLAQLEKVPHHQLEQKFVAYFKKVGKGD
NQSNCTLEDFATYFLGALRQSTKRYYYSQNSETPVFPLTPIHQLKPPVAD
VVKEEEQQQLNESSILSRSSCSMSSTSNTTPAPQQPQGRRSTPGSGAQFC
STPNRSGGGGAGGGHSICLGNFLVNTPIQSHQRSKKKITPQKQQQNQHAS
LGSGTGAGATPQSKPRRRVLPMTISKNVSASSSFGDTSSFSNENNFWRIS
QSSEIFDRSQEAALEMEARKFLLLKKQEIKSEAPVNVSQQERTPEDEVFP
EEAISLEGVANANHLQLLSTIYSLLMDLNLVPNVLRELSFVVHLLNVRDF
GQSPVKSYVPSALEGLTQHKSCVYFAAKLLENQKKLLLQLDKRTLSVLLQ
NERLSLLPQGVVQELETHCQRRQDSTTPFAMDTSSSSQQNVYYHVENDSR
DNFPSQNEFGAFKSQRDLFYKALKRWEVSHLNRGFNFPSELGPRIMDIYK
KSEHPVNMTHLAKLFVNQLLISATETTESPEELGLKLDPLRHNKLAQRLV
TSSSSVEGQFPRSQAFFRDFIAVCSSVAFLVHLKLELFVQLMRNNDSTFD
LLQLTDDVAVEEQSAQQGPYIVRVQTMANMLILAKFLGYVTVMPFSGTTQ
HGNPTPPYLCPQQLQLRNHFRPDFNLREILERSMRQGKLLITLPWLVQYL
AMLDLVSLHLPDAVATLELLYGLYADIRMAKLQPAAVFIARSCIGWLLDA
QPQLVNGYYNYRAQEAGVGSISAIVDICLKDLSCHDKSHAPLLDELLPVA
CPFLQEFRVSITPSRQAKSGRFRYITTRLEQLQQNSSSISKDAIVASELS
PAEQQQRKLVDAYLQSQNASTRRLIEFVTERTFKCVVKDAQQEILLPSKA
SADAKVNEIKSTMLEEVFQELHEIFQDARENACQRWKEHVHQMLDRRIEH
SLDGLLPSSTNAVLRSTYAHLIRVQAQTQLQQWLQSSVLQSTFYHGDLQE
LATKVCNCNRNKADAAAAGGGGSSELQLSPDIGFSLSEFLYQLQQWLHCL
SLRPEYVGSQEDLAELLRKAQKAVLLPKMPTVFYHLIGSGLVHLLQLLIT
RKPNFLDKDIISASCSVWRSQQLMDSKASPGIFDGLISISFVQEMANSAD
SFRMLETILRSMLQSGAIRADHLNELFMPLFAENWSPKVWCMLSELLQQL
SLSGKDSEAHYASGDSPEDEAKSHLFMEMLADLSRDLDNFASFLDH
BO10925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlt-PA | 1240 | CG32315-PA | 1..1240 | 1..1240 | 6338 | 100 | Plus |
