Clone Sequence Records
BO10952.3prime Sequence
918 bp (838 high quality bases) assembled on 2006-04-19
> BO10952.3prime
ATGGTCTAGAAAGCTTGCGGAAGCACTGCGCTGCTCATTCTCCGGCCTGC
GATCTGTGGCAATCTGCAGCAGATTATTAAACTCCGTGTCAAGTATTTGG
CGAGCCTGAGCATTTTGTGTAGGTATTTGAAGGGCCAAGCCCATGGCATT
CGCATCGAAACCCTCGTCCAGGGCCATCAATCCTCCATGCACTCCCGATT
CGAGCAAGTTATTAGCATATTCCTTCAATCCGATGCTGCCAACCCATCGG
ATAACTCTCTCGTTGCTCCAGACTAGTACGTCACACAGGCCGTTTTCACT
CATCTTGCGCCTGTGCTCCAACTCCGTGCGATCGTAGTTAAGGCGCTTGA
GCATCGATATGCCGTACTGTAGGCTGGTGCGATGGAAACTATCCACCATT
TTGAGCTGACCACGCAAGTCCTTTTTGGTGAGGTGGTCCAGCATCCGGGC
ATCCACCAGACACTCCATGAAGGTTGTGCGATATTGGGGCAGGCCAAGAC
CTGGCAACCAATAGTTACCGATCCACTCATGGTTCATATCGCCAAATGCC
AGAGTGGTGCGAGAGGTTTGTGGCGCCGAGGGAGAGGTCAGTGAAACCAT
TTCCTGAATGGCCAGCCGAAGTTTGAGCCTGTGCAAGGGATTACTGATGC
CAATTTCCCGCTGAATTTCCGTATCGCTTAACGCACTCATGATGGCCCCG
GACTTGACATTGGCTCGACAGGCGGCAACATACCAGGCTGGCATGCCCAC
CCACAGTTCCAACCAGGCGACTATGGTGGGGCCATTCCACAGGGCAAACG
GTGTGCCCGCCTTCATGGCCTCCCCCAGCAAGTCATTGCGGTAATCATGC
TCCTTCTTCTGCCTGCCGTAGTCAACGCTGCTTATTTTGGATCCCTGGGA
GCTGGGCATGCGGGGCAT
BO10952.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:13:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11199-PB | 3606 | Liprin-alpha-RB | 2704..3603 | 918..19 | 4450 | 99.7 | Minus |
| CG11199-PA | 3606 | Liprin-alpha-RA | 2704..3603 | 918..19 | 4450 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Liprin-alpha-RE | 4466 | CG11199-RE | 2907..3806 | 918..19 | 4470 | 99.8 | Minus |
| Liprin-alpha-RD | 4949 | CG11199-RD | 3135..4034 | 918..19 | 4470 | 99.8 | Minus |
| Liprin-alpha-RC | 5970 | CG11199-RC | 2990..3889 | 918..19 | 4470 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:46:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6730046..6730367 | 543..222 | 1610 | 100 | Minus |
| 2L | 23513712 | 2L | 6729570..6729780 | 853..643 | 1025 | 99.1 | Minus |
| 2L | 23513712 | 2L | 6730420..6730540 | 225..105 | 605 | 100 | Minus |
| 2L | 23513712 | 2L | 6729826..6729935 | 651..542 | 550 | 100 | Minus |
| 2L | 23513712 | 2L | 6730597..6730685 | 107..19 | 445 | 100 | Minus |
| 2L | 23513712 | 2L | 6729439..6729504 | 918..853 | 300 | 97 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:46:24 has no hits.
BO10952.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:54:06 Download gff for
BO10952.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11199-PA | 2704..3606 | 16..918 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:12:58 Download gff for
BO10952.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11199-PA | 2704..3606 | 16..918 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:23:14 Download gff for
BO10952.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RC | 2990..3895 | 13..918 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:59:11 Download gff for
BO10952.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RC | 2990..3895 | 13..918 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:59:11 Download gff for
BO10952.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6729439..6729503 | 854..918 | 96 | -> | Minus |
| 2L | 6729570..6729772 | 651..853 | 100 | -> | Minus |
| 2L | 6729827..6729934 | 543..650 | 100 | -> | Minus |
| 2L | 6730047..6730366 | 223..542 | 100 | -> | Minus |
| 2L | 6730423..6730539 | 106..222 | 100 | -> | Minus |
| 2L | 6730599..6730691 | 13..105 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:23:14 Download gff for
BO10952.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6730423..6730539 | 106..222 | 100 | -> | Minus |
| arm_2L | 6730599..6730691 | 13..105 | 96 | | Minus |
| arm_2L | 6729439..6729503 | 854..918 | 96 | -> | Minus |
| arm_2L | 6729570..6729772 | 651..853 | 100 | -> | Minus |
| arm_2L | 6729827..6729934 | 543..650 | 100 | -> | Minus |
| arm_2L | 6730047..6730366 | 223..542 | 100 | -> | Minus |
BO10952.5prime Sequence
935 bp (783 high quality bases) assembled on 2006-04-19
> BO10952.5prime
GAAGTTATCAGTCGACATGTGGAACATGATGTGCGACGTAATGCCCACGA
TATCCGAGGATAGCATCTCGCAGCGCTCCTCGCAGTTTAGCGGGGAGGAT
GCCAACTTTGAGCAGCTGATGGTCTCCATGCTGGACGAGCGGGACAAGCT
GATGGACAGCCTGAGGGAGGCGCAGGAGCGGCTTAACGAGACGGAGAACA
AGCTGCGTGACGTCGAGAAGGAGCGGGACAGCCTGCAGCGACAGATTAAC
GCTAATCTGCCGCAAGAGTTTGCCACCCTGACCAAGGAGCTGACGCAAGC
GCGGGAGACCCTTTTGGAACGTGACGAGGAGATTGGGGAGCTCAAGGCGG
AGAGGAATAATACCAGGCTTCTCCTCGAACATCTGGAGTGCTTGGTGTCC
CGCCACGAGCGTTCCCTGCGTATGACCGTTGTGAAGCGACAGGCTGCCGC
CCAGAGCGGCGTCTCCAGCGAGGTGGAAGTGCTCAAGGCGCTAAAGTCGC
TGTTCGAGCACCACAAGGCGCTGGACGAGAAGGTGCGCGAGCGGTTGCGG
CTTTCCATCGAGAAGAACAACATGATGGAAGAGGAACTCAGCTCTGCCAA
GGAGGAACTGGCCCAGTACAAGGCGGGCGTGGTGCCAGCTGGCGTGGGCA
GTGGCAGCGGAGCAGGGAGTGCCGCAACCACCGCCGGTGGTGGGGGCGCC
GAGAACGGGCTCAAAGAGAAGATGGCGGGCGTGGGCGGATCTGGTGGCGT
TAATGGCGAGGCAAATGAGCTGAACGACTACGCAGCCCAAACCCACGAGC
TGCAAACCATTATTGAGAAGCAGACCTCGGAACTTTCACAATGGCAGCGA
CGCGTTTCTGATTTGAAACACAAGATTAGTGAGCTTGAGGAGAACATGTC
GCGAGTGCAAAAGGAACACTGGCAGGCCCAAAGAC
BO10952.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:13:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11199-PB | 3606 | Liprin-alpha-RB | 1..905 | 17..921 | 4450 | 99.6 | Plus |
| CG11199-PA | 3606 | Liprin-alpha-RA | 1..905 | 17..921 | 4450 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 14:48:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Liprin-alpha-RE | 4466 | CG11199-RE | 204..1118 | 17..931 | 4500 | 99.5 | Plus |
| Liprin-alpha-RD | 4949 | CG11199-RD | 420..1334 | 17..931 | 4500 | 99.5 | Plus |
| Liprin-alpha-RC | 5970 | CG11199-RC | 416..1330 | 17..931 | 4500 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 14:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6725775..6726129 | 367..721 | 1775 | 100 | Plus |
| 2L | 23513712 | 2L | 6724848..6725097 | 17..266 | 1250 | 100 | Plus |
| 2L | 23513712 | 2L | 6725158..6725259 | 266..367 | 510 | 100 | Plus |
| 2L | 23513712 | 2L | 6726200..6726303 | 720..823 | 505 | 99 | Plus |
| 2L | 23513712 | 2L | 6726370..6726480 | 821..931 | 495 | 96.4 | Plus |
Blast to na_te.dros performed on 2015-02-11 14:48:18 has no hits.
BO10952.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:54:06 Download gff for
BO10952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11199-PA | 1..918 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:12:59 Download gff for
BO10952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11199-PA | 1..918 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 08:59:45 Download gff for
BO10952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RC | 416..1333 | 17..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:08:03 Download gff for
BO10952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RC | 416..1333 | 17..935 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:08:03 Download gff for
BO10952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6724848..6725096 | 17..265 | 100 | -> | Plus |
| 2L | 6725158..6725259 | 266..367 | 100 | -> | Plus |
| 2L | 6725776..6726129 | 368..721 | 100 | -> | Plus |
| 2L | 6726202..6726303 | 722..823 | 99 | -> | Plus |
| 2L | 6726373..6726483 | 824..935 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 08:59:45 Download gff for
BO10952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6724848..6725096 | 17..265 | 100 | -> | Plus |
| arm_2L | 6725158..6725259 | 266..367 | 100 | -> | Plus |
| arm_2L | 6725776..6726129 | 368..721 | 100 | -> | Plus |
| arm_2L | 6726202..6726303 | 722..823 | 99 | -> | Plus |
| arm_2L | 6726373..6726483 | 824..935 | 95 | | Plus |
BO10952.complete Sequence
3637 bp (3637 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631934
> BO10952.complete
GAAGTTATCAGTCGACATGTGGAACATGATGTGCGACGTAATGCCCACGA
TATCCGAGGATAGCATCTCGCAGCGCTCCTCGCAGTTTAGCGGGGAGGAT
GCCAACTTTGAGCAGCTGATGGTCTCCATGCTGGACGAGCGGGACAAGCT
GATGGACAGCCTGAGGGAGGCGCAGGAGCGGCTTAACGAGACGGAGAACA
AGCTGCGTGACGTCGAGAAGGAGCGGGACAGCCTGCAGCGACAGATTAAC
GCTAATCTGCCGCAAGAGTTTGCCACCCTGACCAAGGAGCTGACGCAAGC
GCGGGAGACCCTTTTGGAACGTGACGAGGAGATTGGGGAGCTCAAGGCGG
AGAGGAATAATACCAGGCTTCTCCTCGAACATCTGGAGTGCTTGGTGTCC
CGCCACGAGCGTTCCCTGCGTATGACCGTTGTGAAGCGACAGGCTGCCGC
CCAGAGCGGCGTCTCCAGCGAGGTGGAAGTGCTCAAGGCGCTAAAGTCGC
TGTTCGAGCACCACAAGGCGCTGGACGAGAAGGTGCGCGAGCGGTTGCGG
CTTTCCATCGAGAAGAACAACATGATGGAAGAGGAACTCAGCTCTGCCAA
GGAGGAACTGGCCCAGTACAAGGCGGGCGTGGTGCCAGCTGGCGTGGGCA
GTGGCAGCGGAGCAGGGAGTGCCGCAACCACCGCCGGTGGTGGGGGCGCC
GAGAACGGGCTCAAAGAGAAGATGGCGGGCGTGGGCGGATCTGGTGGCGT
TAATGGCGAGGCAAATGAGCTGAACGACTACGCAGCCAAAACCCACGAGC
TGCAAACCATTATTGAGAAGCAGACCTCGGAACTTTCACAATGGCAGCGA
CGCGTTTCTGATTTGAACAACAAGATTAGTGAGCTTGAGGAGAACATGTC
GCGAGTGCAAAAGGAACACTGCAAGGCCCAAGACCAGTGTGCCAAGCTGC
AGCGGGATCTGCGCGAGAATGTTGCCCAGAAAGAGGATCAGGAGGAGCGC
ATTACCACATTGGAAAAGCGATACCTGAATGCTCAGAGGGAGTCTACATC
GTTGCATGATCTCAACGAGAAACTCGAGCAGGAACTACGGCATAAAGAGG
CGCAGCTCAAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTG
GAGCTCTCCGAACAGAAGCTCGCCCAGCACGCCAAGCTGCAGCCCGACAT
GGAAGAGCAGCTAAAGGCACGCATGGAGGCATTGACTAAGGCTCAAGAAA
GACACGGTTCTGCAGAAGACCGCATCCGGGGACTGGAGACGAACCTCGAC
GAGAAGACCAACGAGGTGGTAAGACTGAACCAGCGTCTGAAGATGAACGA
GGAGCACAACCTACGGCTTTCCTCCACGGTGGATAAGCTGCTCTCGGAGT
CAAACGAGCGTCTGCAAGTGCACCTGAAGGAGCGTATGCATGCGCTGGAC
GAGAAGAACGCCCTCACCCAGGAACTGGAAAAGGCGCGTAAGGTGGCCGA
GGAGCTACACCACGAGAAGAGCGAAATCATGAAGGAGCTTTCGAAGACGC
GCCTGGAGATCGAGAACTTTAAGCGGCAGCTGCTGCAGCAGGAGATCGCC
TACAACATCCAGCAAACGGAGGCGCTCACGCGGAGCCTTTCGCCCAGTAG
CGTAGTGGACCCCAGTGGCGCCTTCAGCCGGAGCAATTCGCACGCCAGCT
TTGAGACGCACTCCCTGCGCCGCCAGAGCAAACAGCGACTGTCCGAGGAG
AACGCCCTGGTCCGCTCCATGGCCGAGCAGGAATGGGAAAAACTGCAGCA
GGCGGCGCATGCCCAGCAGCAGGCCTACGAGCTGGCCAGCGCTGCGGATT
GCGATGACTCTGATGTCCTGTACGCAGCGGCCACCGACATGATGTCTCCT
TCGGGACACACAGATGCCCAGACATTGGCCATGATGCTGCAGGAACAGTT
GGACGCCATTAACAATGAGATTCGCCTGATCCAGGAGGAAAAGCAGTCAA
CAGAGGCGCGGGCCGAGGAGCTGGAGTCGCGTGTCGGCAGTCTGGAGCAC
GTAAACCTGCTGGCTCGCGGTCGCTCCATGGACAGGCAGAGTCCGCCAAT
GAGTGGCCGGAGCACGCCCAACAGTCCGCAGCGGGATTTCATGCAGAAGT
ATCACACGCTCAACTTGCCCGTGCTGTCCAGCGATGCCTCTCGCGAAGAG
CTCCACGGCGGCATGTCCACCACAGGTGATTCGAGTTCCGGCGGAGCGGC
CTCTCCACTGACCGCCCGCTCTATGCGCCTGGAGCGTGTGGCCCAGGCCT
TGGCCCACAGCCAGGAGGAGCTAAGGCGGCGTTCCATTGGCCTTAATCCC
AATGCTTCAGTGGCGCCCAACCACACTGGCGGTCACATGCCCCTGAGCAG
CCACAGTTACGGACTGTCGCCGCTTAGCTCTCGTTACGGCAGCCAGGAGT
CACTGCGTCACTATAACACAATGGGATCTATGTCCATGCTGCAGACACCT
ACTTCGGGCGTATCCAGGGAAGCGGCAGCCGCTGCTGTCCAAAAGAAGAA
GGGCATTAAGTCCTCGCTGGGTAGGTTCTTTAGCAAAAAGGAGAAGGTGA
AGGGCGTGAAGGATACGCTGCCCGACGGCTCGCCCAGCATGATGTCCATT
GGCAACCTGTCGATTGGACTGAGCGAGGTGGACTCCAACTATGATGCTAT
GAGCATGACTGGCGGAATGATGCCCCGCATTGCCAGCTCCCAGGGATCCA
AAATAAGCAGCGTTGACTACGGCAGGCAGAAGAAGGAGCATGATTACCGC
AATGACTTGCTGGGGGAGGCCATGAAGGCGGGCACACCGTTTGCCCTGTG
GAATGGCCCCACCATAGTCGCCTGGTTGGAACTGTGGGTGGGCATGCCAG
CCTGGTATGTTGCCGCCTGTCGAGCCAATGTCAAGTCCGGGGCCATCATG
AGTGCGTTAAGCGATACGGAAATTCAGCGGGAAATTGGCATCAGTAATCC
CTTGCACAGGCTCAAACTTCGGCTGGCCATTCAGGAAATGGTTTCACTGA
CCTCTCCCTCGGCGCCACAAACCTCTCGCACCACTCTGGCATTTGGCGAT
ATGAACCATGAGTGGATCGGTAACTATTGGTTGCCAGGTCTTGGCCTGCC
CCAATATCGCACAACCTTCATGGAGTGTCTGGTGGATGCCCGGATGCTGG
ACCACCTCACCAAAAAGGACTTGCGTGGTCAGCTCAAAATGGTGGATAGT
TTCCATCGCACCAGCCTACAGTACGGCATATCGATGCTCAAGCGCCTTAA
CTACGATCGCACGGAGTTGGAGCACAGGCGCAAGATGAGTGAAAACGGCC
TGTGTGACGTACTAGTCTGGAGCAACGAGAGAGTTATCCGATGGGTTGGC
AGCATCGGATTGAAGGAATATGCTAATAACTTGCTCGAATCGGGAGTGCA
TGGAGGATTGATGGCCCTGGACGAGGGTTTCGATGCGAATGCCATGGGCT
TGGCCCTTCAAATACCTACACAAAATGCTCAGGCTCGCCAAATACTTGAC
ACGGAGTTTAATAATCTGCTGCAGATTGCCACAGATCGCAGGCCGGAGAA
TGAGCAGCGCAGTGCTTCCGCAAGCTTTCTAGACCAT
BO10952.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Liprin-alpha-RE | 3645 | CG11199-PE | 1..3603 | 17..3619 | 18015 | 100 | Plus |
| Liprin-alpha-RA | 3606 | CG11199-PA | 1..3603 | 17..3619 | 18015 | 100 | Plus |
| Liprin-alpha-RB | 3606 | CG11199-PB | 1..3603 | 17..3619 | 18015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:45:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Liprin-alpha-RE | 4466 | CG11199-RE | 204..3806 | 17..3619 | 18015 | 100 | Plus |
| Liprin-alpha-RA | 4466 | CG11199-RA | 204..3806 | 17..3619 | 18015 | 100 | Plus |
| Liprin-alpha-RB | 4814 | CG11199-RB | 297..3899 | 17..3619 | 18015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6727861..6728780 | 1239..2158 | 4600 | 100 | Plus |
| 2L | 23513712 | 2L | 6728877..6729504 | 2158..2785 | 3140 | 100 | Plus |
| 2L | 23513712 | 2L | 6725775..6726129 | 367..721 | 1775 | 100 | Plus |
| 2L | 23513712 | 2L | 6730046..6730367 | 3095..3416 | 1610 | 100 | Plus |
| 2L | 23513712 | 2L | 6724848..6725097 | 17..266 | 1250 | 100 | Plus |
| 2L | 23513712 | 2L | 6729570..6729780 | 2785..2995 | 1025 | 99.1 | Plus |
| 2L | 23513712 | 2L | 6726370..6726541 | 821..992 | 860 | 100 | Plus |
| 2L | 23513712 | 2L | 6727192..6727323 | 1110..1241 | 660 | 100 | Plus |
| 2L | 23513712 | 2L | 6726597..6726718 | 990..1111 | 610 | 100 | Plus |
| 2L | 23513712 | 2L | 6730420..6730540 | 3413..3533 | 605 | 100 | Plus |
| 2L | 23513712 | 2L | 6729826..6729935 | 2987..3096 | 550 | 100 | Plus |
| 2L | 23513712 | 2L | 6726200..6726303 | 720..823 | 520 | 100 | Plus |
| 2L | 23513712 | 2L | 6725158..6725259 | 266..367 | 510 | 100 | Plus |
| 2L | 23513712 | 2L | 6730597..6730685 | 3531..3619 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:45:14 has no hits.
BO10952.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:55:56 Download gff for
BO10952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RA | 1..3606 | 17..3622 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:12:54 Download gff for
BO10952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RA | 200..3808 | 17..3625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:33:39 Download gff for
BO10952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RB | 420..4022 | 17..3621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:55:56 Download gff for
BO10952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RA | 200..3808 | 17..3625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:25:50 Download gff for
BO10952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Liprin-alpha-RB | 297..3899 | 17..3621 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:25:50 Download gff for
BO10952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6726202..6726303 | 722..823 | 100 | -> | Plus |
| 2L | 6726373..6726540 | 824..991 | 100 | -> | Plus |
| 2L | 6726599..6726718 | 992..1111 | 100 | -> | Plus |
| 2L | 6727194..6727322 | 1112..1240 | 100 | -> | Plus |
| 2L | 6725776..6726129 | 368..721 | 100 | -> | Plus |
| 2L | 6724848..6725096 | 17..265 | 100 | -> | Plus |
| 2L | 6725158..6725259 | 266..367 | 100 | -> | Plus |
| 2L | 6727863..6728780 | 1241..2158 | 100 | -> | Plus |
| 2L | 6728878..6729503 | 2159..2784 | 100 | -> | Plus |
| 2L | 6729570..6729772 | 2785..2987 | 100 | -> | Plus |
| 2L | 6729827..6729934 | 2988..3095 | 100 | -> | Plus |
| 2L | 6730047..6730366 | 3096..3415 | 100 | -> | Plus |
| 2L | 6730423..6730539 | 3416..3532 | 100 | -> | Plus |
| 2L | 6730599..6730685 | 3533..3621 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:33:39 Download gff for
BO10952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6724848..6725096 | 17..265 | 100 | -> | Plus |
| arm_2L | 6725158..6725259 | 266..367 | 100 | -> | Plus |
| arm_2L | 6725776..6726129 | 368..721 | 100 | -> | Plus |
| arm_2L | 6726202..6726303 | 722..823 | 100 | -> | Plus |
| arm_2L | 6726373..6726540 | 824..991 | 100 | -> | Plus |
| arm_2L | 6726599..6726718 | 992..1111 | 100 | -> | Plus |
| arm_2L | 6727194..6727322 | 1112..1240 | 100 | -> | Plus |
| arm_2L | 6727863..6728780 | 1241..2158 | 100 | -> | Plus |
| arm_2L | 6728878..6729503 | 2159..2784 | 100 | -> | Plus |
| arm_2L | 6729570..6729772 | 2785..2987 | 100 | -> | Plus |
| arm_2L | 6729827..6729934 | 2988..3095 | 100 | -> | Plus |
| arm_2L | 6730047..6730366 | 3096..3415 | 100 | -> | Plus |
| arm_2L | 6730423..6730539 | 3416..3532 | 100 | -> | Plus |
| arm_2L | 6730599..6730685 | 3533..3621 | 97 | | Plus |
BO10952.pep Sequence
Translation from 16 to 3637
> BO10952.pep
MWNMMCDVMPTISEDSISQRSSQFSGEDANFEQLMVSMLDERDKLMDSLR
EAQERLNETENKLRDVEKERDSLQRQINANLPQEFATLTKELTQARETLL
ERDEEIGELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAAAQSGVS
SEVEVLKALKSLFEHHKALDEKVRERLRLSIEKNNMMEEELSSAKEELAQ
YKAGVVPAGVGSGSGAGSAATTAGGGGAENGLKEKMAGVGGSGGVNGEAN
ELNDYAAKTHELQTIIEKQTSELSQWQRRVSDLNNKISELEENMSRVQKE
HCKAQDQCAKLQRDLRENVAQKEDQEERITTLEKRYLNAQRESTSLHDLN
EKLEQELRHKEAQLKLHEEKIGAIEEKLELSEQKLAQHAKLQPDMEEQLK
ARMEALTKAQERHGSAEDRIRGLETNLDEKTNEVVRLNQRLKMNEEHNLR
LSSTVDKLLSESNERLQVHLKERMHALDEKNALTQELEKARKVAEELHHE
KSEIMKELSKTRLEIENFKRQLLQQEIAYNIQQTEALTRSLSPSSVVDPS
GAFSRSNSHASFETHSLRRQSKQRLSEENALVRSMAEQEWEKLQQAAHAQ
QQAYELASAADCDDSDVLYAAATDMMSPSGHTDAQTLAMMLQEQLDAINN
EIRLIQEEKQSTEARAEELESRVGSLEHVNLLARGRSMDRQSPPMSGRST
PNSPQRDFMQKYHTLNLPVLSSDASREELHGGMSTTGDSSSGGAASPLTA
RSMRLERVAQALAHSQEELRRRSIGLNPNASVAPNHTGGHMPLSSHSYGL
SPLSSRYGSQESLRHYNTMGSMSMLQTPTSGVSREAAAAAVQKKKGIKSS
LGRFFSKKEKVKGVKDTLPDGSPSMMSIGNLSIGLSEVDSNYDAMSMTGG
MMPRIASSQGSKISSVDYGRQKKEHDYRNDLLGEAMKAGTPFALWNGPTI
VAWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLK
LRLAIQEMVSLTSPSAPQTSRTTLAFGDMNHEWIGNYWLPGLGLPQYRTT
FMECLVDARMLDHLTKKDLRGQLKMVDSFHRTSLQYGISMLKRLNYDRTE
LEHRRKMSENGLCDVLVWSNERVIRWVGSIGLKEYANNLLESGVHGGLMA
LDEGFDANAMGLALQIPTQNAQARQILDTEFNNLLQIATDRRPENEQRSA
SASFLDH
BO10952.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Liprin-alpha-PE | 1214 | CG11199-PE | 1..1201 | 1..1201 | 6060 | 100 | Plus |
| Liprin-alpha-PA | 1201 | CG11199-PA | 1..1201 | 1..1201 | 6060 | 100 | Plus |
| Liprin-alpha-PB | 1201 | CG11199-PB | 1..1201 | 1..1201 | 6060 | 100 | Plus |
| Liprin-alpha-PD | 1205 | CG11199-PD | 1..1205 | 1..1201 | 6045 | 99.7 | Plus |
| Liprin-alpha-PC | 1158 | CG11199-PC | 1..1158 | 1..1201 | 5490 | 92 | Plus |
