Clone BO10977 Report

Search the DGRC for BO10977

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:109
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptUbqn-RA
Protein status:BO10977.pep: validated full length
Sequenced Size:1675

Clone Sequence Records

BO10977.3prime Sequence

923 bp (835 high quality bases) assembled on 2006-04-19

> BO10977.3prime
ATGGTCTAGAAAGCTTGCACTCAAGGACAACTGGTTGAGGGACAGCAGTC
GCTCTACCGCCGCATTGATGTCCCCGAAGGTAGCGATCAGAGCCTGCAAG
TTGGCATCACGGTTGACAAAGCCCATGGCGTTCAGCTGCTCCAGCTGCGA
CTGGTAGCGCACCTCCGGCGGCTGTGTGTTGTCCGCGTTGTTCGACATCC
CGTTGAGCATGCGCATCATGAAGTCGTTGAAGAGCTGCGCGTTGGGACCA
CCGCCCGGGGCCAGGTTTGGAGTGCCGGTGCCGGCGTTGAGGCCGCTGCT
TGGCGAAACATTGTTGGTGCTGGCACCGCTGTTGCCCCCGCTCCCATCGC
CGCTGGCTGGATTCGTTCCGGTGCCGGCACCCGGTGGTGGCGGTGGAATG
CCCAGGGTGCCAACGAGACCTGGGGCCGCGCTGCGCAGCTGCTCCATGCC
CTGCTGGATCTGCAGGATAGCGTTCATTGCATCCGGATTGGTCAGCATGT
TCATCACCTCGGGGTTCTGCATTTGGGCCATAAACTGCGGCATCATCTGA
CGCACCTGCTCCTGCAGGGCGGGATTGTTAGACATGAGCGGACTGCTGCT
CAGCAAGCGCGCGGCCATGTCCGGGTCCTGTGACATGGACTCCATCATGG
AACGCGTGTAGGGCGCGTTCAGCAGGTTCTGCATCATGGCTGGATTGTCG
GCCATCTGCTGGAGCAGGCTTCGCATGGCCGGCGTGTTGAGCACATTGTT
CGGCGGCAGATCCCCCGTCGGATTGCCGGCGCCGGAGCCACCGACTGTTC
CATTGGTTCCCGAATTGGCACCGCCCCATGGATTCGGCAGGGGATTGCGG
TTCTCGGTGCCCTGCTGCGGGTTGTTGCCGGCTCCCTGACCGCCGCCGTC
GACAGGCCGGCAAAGGGGTGCGA

BO10977.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14224-PA 1644 CG14224-RA 775..1641 885..19 4335 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 10:44:53
Subject Length Description Subject Range Query Range Score Percent Strand
Ubqn-RB 3429 CG14224-RB 933..1834 919..19 4440 99.7 Minus
Ubqn-RA 3011 CG14224-RA 933..1834 919..19 4440 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 10:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19685083..19685910 919..93 4045 99.5 Minus
X 23542271 X 19685989..19686063 93..19 375 100 Minus
Blast to na_te.dros performed 2015-02-01 10:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
TAHRE 10463 TAHRE OSV 10463bp 3790..3837 241..191 113 72.5 Minus

BO10977.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:54:54 Download gff for BO10977.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14224-PA 736..1644 15..922 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:14:05 Download gff for BO10977.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14224-PA 736..1644 15..922 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:30:55 Download gff for BO10977.3prime
Subject Subject Range Query Range Percent Splice Strand
Ubqn-RA 929..1837 15..922 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 12:07:01 Download gff for BO10977.3prime
Subject Subject Range Query Range Percent Splice Strand
Ubqn-RA 929..1837 15..922 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 12:07:01 Download gff for BO10977.3prime
Subject Subject Range Query Range Percent Splice Strand
X 19685079..19685910 93..922 99 -> Minus
X 19685990..19686066 15..92 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:30:55 Download gff for BO10977.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19579112..19579943 93..922 99 -> Minus
arm_X 19580023..19580099 15..92 97   Minus

BO10977.5prime Sequence

848 bp (788 high quality bases) assembled on 2006-04-19

> BO10977.5prime
GAAGTTATCAGTCGACATGGCGGAAGGCGGCAGCAAGCGCATCAACGTGG
TTGTAAAAACGCCAAAGGACAAGAAAACGGTCGAAGTTGACGAAGATTCT
GGAATAAAAGATTTCAAAATTCTGGTTGCACAAAAGTTCGAGGCGGAGCC
CGAGCAGCTCGTGCTCATTTTTGCCGGCAAAATTATGAAGGACACGGACA
CCCTTCAGATGCACAACATCAAGGACAACCTGACGGTGCATCTGGTGATT
AAGGCGCCGACGCGCAACAACGAGCAGCCGGCCCGACAGCCGGCTGACGT
GCGCCAAACGCCCTTTGGCCTCAATCAATTCGGTGGCCTGGCCGGAATGG
AGGCACTTGGAGCCGGATCGAACACGTTCATGGATCTGCAGGCGCGCATG
CAGAACGAGCTGCTCAACAATGGCGACATGCTGCGCTCCCTGATGGACAA
CCCGATGGTGCAGCAGATGATGAATAATCCGGATACCATGCGTCAGCTTA
TCACGTCCAATCCGCAAATGCATGACCTGATGCAGCGCAACCCCGAGATC
TCGCATATGCTTAACAATCCGGACCTGCTGCGCCAGACGATGGAGCTGGC
CCGCAATCCCTCGATGTTGCAGGAGCTGATGCGTTCGCACGACCGCGCCA
TGTCGAATCTGGAGTCGGTGCCGGGCGGCTATAGCGCCCTGCAGCGCATC
TACCGCGATATTCAGGAGCCAATGATGAACGCGGCCACGGAATCCTTTGG
TCGCAACCCCTTTGCCGGCCTGGTCGACGGCGGCGGTTCAGGAGCCGGCA
ACAACCCGCAGCAGGGCACCGAGAACCGCAATCCCCTGCCGAATCCAT

BO10977.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:14:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14224-PA 1644 CG14224-RA 1..832 17..848 4160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:28:16
Subject Length Description Subject Range Query Range Score Percent Strand
Ubqn-RB 3429 CG14224-RB 189..1025 12..848 4170 99.9 Plus
Ubqn-RA 3011 CG14224-RA 189..1025 12..848 4170 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:28:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19684440..19685175 113..848 3680 100 Plus
X 23542271 X 19683996..19684096 12..112 490 99 Plus
Blast to na_te.dros performed on 2015-02-13 08:28:13 has no hits.

BO10977.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:54:55 Download gff for BO10977.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14224-PA 1..832 17..848 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:14:06 Download gff for BO10977.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14224-PA 1..832 17..848 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:36:28 Download gff for BO10977.5prime
Subject Subject Range Query Range Percent Splice Strand
Ubqn-RA 187..1025 9..848 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:12:52 Download gff for BO10977.5prime
Subject Subject Range Query Range Percent Splice Strand
Ubqn-RA 187..1025 9..848 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:12:52 Download gff for BO10977.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19683994..19684096 11..112 97 -> Plus
X 19684440..19685175 113..848 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:36:28 Download gff for BO10977.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19578027..19578129 11..112 97 -> Plus
arm_X 19578473..19579208 113..848 100   Plus

BO10977.complete Sequence

1675 bp (1675 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631945

> BO10977.complete
GAAGTTATCAGTCGACATGGCGGAAGGCGGCAGCAAGCGCATCAACGTGG
TTGTAAAAACGCCAAAGGACAAGAAAACGGTCGAAGTTGACGAAGATTCT
GGAATAAAAGATTTCAAAATTCTGGTTGCACAAAAGTTCGAGGCGGAGCC
CGAGCAGCTCGTGCTCATTTTTGCCGGCAAAATTATGAAGGACACGGACA
CCCTTCAGATGCACAACATCAAGGACAACCTGACGGTGCATCTGGTGATT
AAGGCGCCGACGCGCAACAACGAGCAGCCGGCCCGACAGCCGGCTGACGT
GCGCCAAACGCCCTTTGGCCTCAATCAATTCGGTGGCCTGGCCGGAATGG
AGGCACTTGGAGCCGGATCGAACACGTTCATGGATCTGCAGGCGCGCATG
CAGAACGAGCTGCTCAACAATGGCGACATGCTGCGCTCCCTGATGGACAA
CCCGATGGTGCAGCAGATGATGAATAATCCGGATACCATGCGTCAGCTTA
TCACGTCCAATCCGCAAATGCATGACCTGATGCAGCGCAACCCCGAGATC
TCGCATATGCTTAACAATCCGGACCTGCTGCGCCAGACGATGGAGCTGGC
CCGCAATCCCTCGATGTTGCAGGAGCTGATGCGTTCGCACGACCGCGCCA
TGTCGAATCTGGAGTCGGTGCCGGGCGGCTATAGCGCCCTGCAGCGCATC
TACCGCGATATTCAGGAGCCAATGATGAACGCGGCCACGGAATCCTTTGG
TCGCAACCCCTTTGCCGGCCTGGTCGACGGCGGCGGTTCAGGAGCCGGCA
ACAACCCGCAGCAGGGCACCGAGAACCGCAATCCCCTGCCGAATCCATGG
GGCGGTGCCAATTCGGGAACCAATGGAACAGTCGGTGGCTCCGGCGCCGG
CAATCCGACGGGGGATCTGCCGCCGAACAATGTGCTCAACACGCCGGCCA
TGCGAAGCCTGCTCCAGCAGATGGCCGACAATCCAGCCATGATGCAGAAC
CTGCTGAACGCGCCCTACACGCGTTCCATGATGGAGTCCATGTCACAGGA
CCCGGACATGGCCGCGCGCTTGCTGAGCAGCAGTCCGCTCATGTCTAACA
ATCCCGCCCTGCAGGAGCAGGTGCGTCAGATGATGCCGCAGTTTATGGCC
CAAATGCAGAACCCCGAGGTGATGAACATGCTGACCAATCCGGATGCAAT
GAACGCTATCCTGCAGATCCAGCAGGGCATGGAGCAGCTGCGCAGCGCGG
CCCCAGGTCTCGTTGGCACCCTGGGCATTCCACCGCCACCACCGGGTGCC
GGCACCGGAACGAATCCAGCCAGCGGCGATGGGAGCGGGGGCAACAGCGG
TGCCAGCACCAACAATGTTTCGCCAAGCAGCGGCCTCAACGCCGGCACCG
GCACTCCAAACCTGGCCCCGGGCGGTGGTCCCAACGCGCAGCTCTTCAAC
GACTTCATGATGCGCATGCTCAACGGGATGTCGAACAACGCGGACAACAC
ACAGCCGCCGGAGGTGCGCTACCAGTCGCAGCTGGAGCAGCTGAACGCCA
TGGGCTTTGTCAACCGTGATGCCAACTTGCAGGCTCTGATCGCTACCTTC
GGGGACATCAATGCGGCGGTAGAGCGACTGCTGTCCCTCAACCAGTTGTC
CTTGAGTGCAAGCTTTCTAGACCAT

BO10977.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
Ubqn-RB 1644 CG14224-PB 1..1641 17..1657 8205 100 Plus
Ubqn-RA 1644 CG14224-PA 1..1641 17..1657 8205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
Ubqn-RB 3429 CG14224-RB 189..1834 12..1657 8215 99.9 Plus
Ubqn-RA 3011 CG14224-RA 189..1834 12..1657 8215 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19684440..19685910 113..1583 7355 100 Plus
X 23542271 X 19683996..19684096 12..112 490 99 Plus
X 23542271 X 19685989..19686063 1583..1657 375 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:27:59 has no hits.

BO10977.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:55:54 Download gff for BO10977.complete
Subject Subject Range Query Range Percent Splice Strand
CG14224-RA 1..1644 17..1661 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:12:50 Download gff for BO10977.complete
Subject Subject Range Query Range Percent Splice Strand
Ubqn-RA 247..1897 9..1661 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:12 Download gff for BO10977.complete
Subject Subject Range Query Range Percent Splice Strand
Ubqn-RA 194..1834 17..1659 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:55:54 Download gff for BO10977.complete
Subject Subject Range Query Range Percent Splice Strand
CG14224-RA 247..1897 9..1661 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:57 Download gff for BO10977.complete
Subject Subject Range Query Range Percent Splice Strand
Ubqn-RA 194..1834 17..1659 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:57 Download gff for BO10977.complete
Subject Subject Range Query Range Percent Splice Strand
X 19684001..19684096 17..112 100 -> Plus
X 19684440..19685910 113..1583 100 -> Plus
X 19685990..19686063 1584..1659 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:12 Download gff for BO10977.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19578034..19578129 17..112 100 -> Plus
arm_X 19578473..19579943 113..1583 100 -> Plus
arm_X 19580023..19580096 1584..1659 97   Plus

BO10977.pep Sequence

Translation from 16 to 1675

> BO10977.pep
MAEGGSKRINVVVKTPKDKKTVEVDEDSGIKDFKILVAQKFEAEPEQLVL
IFAGKIMKDTDTLQMHNIKDNLTVHLVIKAPTRNNEQPARQPADVRQTPF
GLNQFGGLAGMEALGAGSNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQ
MMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNPSM
LQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESFGRNPFA
GLVDGGGSGAGNNPQQGTENRNPLPNPWGGANSGTNGTVGGSGAGNPTGD
LPPNNVLNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPDMAA
RLLSSSPLMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQ
IQQGMEQLRSAAPGLVGTLGIPPPPPGAGTGTNPASGDGSGGNSGASTNN
VSPSSGLNAGTGTPNLAPGGGPNAQLFNDFMMRMLNGMSNNADNTQPPEV
RYQSQLEQLNAMGFVNRDANLQALIATFGDINAAVERLLSLNQLSLSASF
LDH

BO10977.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
Ubqn-PB 547 CG14224-PB 1..547 1..547 2828 100 Plus
Ubqn-PA 547 CG14224-PA 1..547 1..547 2828 100 Plus
CG31528-PA 344 CG31528-PA 7..232 9..278 273 27.3 Plus