Clone Sequence Records
BO11024.3prime Sequence
781 bp (688 high quality bases) assembled on 2006-04-19
> BO11024.3prime
ATGGTCTAGAAAGCTTGCCATCAGGACGCAACACCTGCGACTGGAACTGG
TGCTATCGGTGACCACGTCGCCAGTGATGCCGCTGAACTTGTTCAGCGAA
CTGCCCGCCGGCGAGGAGCCCTCGAAGTCGGATAGCACGCTTCCCGCGCC
CATGTGACCCAATGTTGGCTGCGTCGAGATCGGTGCGGATCCGTTGTTGT
TGTTGTTGCTGGTGCTCAGGTTGTTGTTGTTGTTGCTGCTGCTGCCGCCG
GCTCCTAAAACAGAACCATTAGTTGTTGTGGCATTAGCTGCTGCAATTGG
ATGGGCATTGCTAGCTGTTTGGGATGACAATTCGAAAGTATTGAGGACAT
TGGCGGTGCGTGAAAGCGAGCGTTGCTTCTTCAAATTGGCCAATGTGGCG
CTGTAGCCATCCAAGGCAACATGCTGCTGCTGCTGCTGCTGTTGCTGTTG
CTGCTGATGTTGCTGAAGCTGCTGGTGTTGCTGCAACAGCAGTACGTGTT
GCTGGTGGTGGTGTTGCTGCTGCTGCTGCTGCTGCTGTTGATGTTGCTGA
TGGTGGTGCGTGCTATTGGTGTCCACGAGGACGGTGACCTGGACATTGAT
CTTGCCGTTGGCAGCCTCCTTCGACGACTGGATTTGAACGGCCTCGGCAC
TGGCCGCCGTACCCTTCTCGGTGAGAATGACGGCCGCCGCCGAGGTGGCT
CGCTGCATCTCTCCCGCAGCACCTGCAGCTTTCAGGCGTAGCAGTTCATC
GTTTTCCCGGCCATCCGGTGGACGGCGCGAC
BO11024.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:15:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6896-PA | 2226 | MYPT-75D-RA | 1461..2223 | 781..19 | 3815 | 100 | Minus |
| CG1391-PC | 3003 | sol-RC | 259..296 | 540..503 | 165 | 97.3 | Minus |
| CG1391-PD | 3723 | sol-RD | 979..1016 | 540..503 | 165 | 97.3 | Minus |
| CG1391-PB | 4785 | sol-RB | 2041..2078 | 540..503 | 165 | 97.3 | Minus |
| CG1693-PB | 2511 | tty-RB | 2185..2222 | 534..497 | 165 | 97.3 | Minus |
| CG1693-PA | 2913 | tty-RA | 2185..2222 | 534..497 | 165 | 97.3 | Minus |
| CG32677-PA | 5439 | CG32677-RA | 379..416 | 549..512 | 165 | 97.3 | Minus |
| CG6191-PA | 2154 | CG6191-RA | 313..353 | 549..509 | 155 | 95.1 | Minus |
| CG1391-PC | 3003 | sol-RC | 265..299 | 537..503 | 150 | 97.1 | Minus |
| CG1391-PD | 3723 | sol-RD | 985..1019 | 537..503 | 150 | 97.1 | Minus |
| CG1391-PB | 4785 | sol-RB | 2047..2081 | 537..503 | 150 | 97.1 | Minus |
| CG12632-PB | 1083 | fd3F-RB | 577..611 | 537..503 | 150 | 97.1 | Minus |
| CG14478-PA | 1539 | CG14478-RA | 319..368 | 549..500 | 150 | 92 | Minus |
| CG14478-PB | 1539 | CG14478-RB | 319..368 | 549..500 | 150 | 92 | Minus |
| CG1770-PB | 3546 | HDAC4-RB | 184..212 | 549..521 | 145 | 100 | Minus |
| CG1770-PC | 3600 | HDAC4-RC | 397..425 | 549..521 | 145 | 100 | Minus |
| CG1770-PA | 3747 | HDAC4-RA | 397..425 | 549..521 | 145 | 100 | Minus |
| CG2302-PA | 2352 | nAcRalpha-7E-RA | 1822..1855 | 534..501 | 145 | 97 | Minus |
| CG12912-PA | 339 | CG12912-RA | 175..212 | 549..512 | 140 | 94.7 | Minus |
| CG4136-PA | 2514 | CG4136-RA | 2022..2054 | 532..500 | 140 | 96.9 | Minus |
| CG30389-PA | 2943 | CG30389-RA | 2638..2675 | 552..515 | 140 | 94.7 | Minus |
| CG30389-PC | 2943 | CG30389-RC | 2638..2675 | 552..515 | 140 | 94.7 | Minus |
| CG14442-PA | 3105 | CG14442-RA | 193..230 | 549..512 | 140 | 94.7 | Minus |
| CG18389-PA | 3498 | Eip93F-RA | 1600..1637 | 555..518 | 140 | 94.7 | Minus |
| CG1770-PB | 3546 | HDAC4-RB | 157..188 | 549..518 | 135 | 96.8 | Minus |
| CG1770-PC | 3600 | HDAC4-RC | 370..401 | 549..518 | 135 | 96.8 | Minus |
| CG1770-PA | 3747 | HDAC4-RA | 370..401 | 549..518 | 135 | 96.8 | Minus |
| CG12964-PA | 3408 | CG12964-RA | 1249..1280 | 549..518 | 135 | 96.8 | Minus |
| CG12964-PA | 3408 | CG12964-RA | 1270..1316 | 555..509 | 135 | 91.4 | Minus |
| CG6104-PA | 657 | m2-RA | 441..472 | 549..518 | 135 | 96.8 | Minus |
| CG13953-PA | 765 | CG13953-RA | 553..584 | 534..503 | 135 | 96.8 | Minus |
| CG6892-PA | 1914 | Ets96B-RA | 983..1034 | 548..497 | 135 | 90.3 | Minus |
| CG32105-PB | 1923 | CG32105-RB | 253..284 | 528..497 | 135 | 96.8 | Minus |
| CG6892-PB | 1923 | Ets96B-RB | 992..1043 | 548..497 | 135 | 90.3 | Minus |
| CG5058-PG | 2190 | grh-RG | 463..494 | 531..500 | 135 | 96.8 | Minus |
| CG9973-PA | 2262 | CG9973-RA | 346..377 | 549..518 | 135 | 96.8 | Minus |
| CG32778-PA | 2829 | CG32778-RA | 1478..1529 | 551..500 | 135 | 90.3 | Minus |
| CG5058-PC | 3909 | grh-RC | 2275..2306 | 531..500 | 135 | 96.8 | Minus |
| CG5058-PD | 4002 | grh-RD | 2275..2306 | 531..500 | 135 | 96.8 | Minus |
| CG10272-PC | 4722 | gpp-RC | 3691..3722 | 534..503 | 135 | 96.8 | Minus |
| CG10272-PA | 5547 | gpp-RA | 3691..3722 | 534..503 | 135 | 96.8 | Minus |
| CG10272-PB | 5547 | gpp-RB | 3691..3722 | 534..503 | 135 | 96.8 | Minus |
| CG10272-PD | 5547 | gpp-RD | 3691..3722 | 534..503 | 135 | 96.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 17:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MYPT-75D-RD | 4016 | CG6896-RD | 2328..3090 | 781..19 | 3815 | 100 | Minus |
| MYPT-75D-RC | 4663 | CG6896-RC | 2975..3737 | 781..19 | 3815 | 100 | Minus |
| MYPT-75D-RA | 3975 | CG6896-RA | 2287..3049 | 781..19 | 3815 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 17:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18665697..18666251 | 573..19 | 2775 | 100 | Minus |
| 3L | 28110227 | 3L | 18664612..18664820 | 781..573 | 1045 | 100 | Minus |
| 2R | 25286936 | 2R | 21149567..21149716 | 422..572 | 225 | 78.1 | Plus |
| 3L | 28110227 | 3L | 9708998..9709108 | 549..442 | 220 | 82 | Minus |
| 2R | 25286936 | 2R | 24280735..24280796 | 498..559 | 220 | 90.3 | Plus |
| 3R | 32079331 | 3R | 23920490..23920542 | 497..549 | 205 | 92.5 | Plus |
| 3L | 28110227 | 3L | 8437716..8437847 | 428..559 | 195 | 76.5 | Plus |
| 2R | 25286936 | 2R | 15488416..15488475 | 500..559 | 195 | 88.3 | Plus |
| 2R | 25286936 | 2R | 17463013..17463062 | 549..500 | 190 | 92 | Minus |
| 2R | 25286936 | 2R | 13591092..13591142 | 509..559 | 180 | 90.2 | Plus |
| 2R | 25286936 | 2R | 21149590..21149646 | 496..552 | 180 | 87.7 | Plus |
Blast to na_te.dros performed 2015-02-06 17:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2512 | 571..422 | 368 | 73.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6821..7056 | 610..371 | 237 | 59.2 | Minus |
BO11024.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:56:03 Download gff for
BO11024.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6896-PA | 1461..2226 | 18..781 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:15:40 Download gff for
BO11024.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6896-PA | 1461..2226 | 18..781 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:34:06 Download gff for
BO11024.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RA | 2287..3058 | 11..781 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:35:06 Download gff for
BO11024.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RA | 2287..3058 | 11..781 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:35:06 Download gff for
BO11024.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18664612..18664820 | 573..781 | 100 | -> | Minus |
| 3L | 18665698..18666260 | 11..572 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:34:06 Download gff for
BO11024.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18657712..18657920 | 573..781 | 100 | -> | Minus |
| arm_3L | 18658798..18659360 | 11..572 | 99 | | Minus |
BO11024.5prime Sequence
854 bp (736 high quality bases) assembled on 2006-04-19
> BO11024.5prime
GAAGTTATCAGTCGACATGATCAAGGGCATTCTGATACAGCGCAAGAGCC
AGGAGGATGCCAGCTACACCAAGCAGCTCAAGATGGAGCACGCCGATCTG
GTGGCCGAGATGCAGACCGTGGAGAGCCTGCCCACCCACGAGCGACTCCA
GCTGGCCAGACTACGTCGTGCGCAGCAGCTGAAGCTGTCCCGCCAGAAGG
ACAAGGAGTGGGCCAAGTTGCAGCGGGCGAAGGGCAACACGGCGAGCGGC
GGCAGCGGAACCGGATCGCTGGGCAACGGGCTGATGAACGGCAACGGAGA
TACCACGCACCACTTCCGGCACGCCAATGGTTCGGGCACGTTGAGCGGCA
GGCGGCACATATCCTTCGAGAACAGCGTGGTGCTCCTGGAGGCGGCATCC
CGGAACGACATGCCCGAGGTGGCCGCCCTGCTGCAGCACGGAATCACGCC
GGATGCCGCAAACGAGGATGGACTGACGGCGATGCATCAGGCGTGCATCG
ATAACAACGTCGAGATGCTGCAGCTGCTGCTGGAGTACGGTGCGAATGTG
GATGCGCAGGACAGTGATAAGTGGACGCCGCTTCATGCGGCTGCCACCTG
CGGCCACCTCGAGCTCGTCCGCATCCTCATCCGGCACGGCGCCAATCTGC
TGGCCGTCAACACCGACGGCAACATGCCCTACGACCTGTGCGACGATGAG
AAAACCTTGGACTTCATCGAGGGCGAGATGGCTCAACGGGGCGTGACCCA
GGAGCTCATCGACGAGACGCGCTCCTCCACGGAGCGGATTATGCTGCGCG
ACCTAATGGAGTTGGCGCGCACAGGAGGAGATTTGGAGGAGCCGGACTAC
CAGT
BO11024.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:15:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6896-PA | 2226 | MYPT-75D-RA | 1..838 | 17..854 | 4190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MYPT-75D-RD | 4016 | CG6896-RD | 866..1705 | 15..854 | 4200 | 100 | Plus |
| MYPT-75D-RC | 4663 | CG6896-RC | 1513..2352 | 15..854 | 4200 | 100 | Plus |
| MYPT-75D-RB | 3872 | CG6896-RB | 1040..1879 | 15..854 | 4200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18662624..18663315 | 163..854 | 3460 | 100 | Plus |
| 3L | 28110227 | 3L | 18661896..18662043 | 15..162 | 740 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:51:40 has no hits.
BO11024.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:56:04 Download gff for
BO11024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6896-PA | 1..838 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:15:42 Download gff for
BO11024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6896-PA | 1..838 | 17..854 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:29:23 Download gff for
BO11024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RB | 1037..1879 | 12..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:20:15 Download gff for
BO11024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RB | 1037..1879 | 12..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:20:15 Download gff for
BO11024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18661893..18662043 | 12..162 | 99 | -> | Plus |
| 3L | 18662624..18663315 | 163..854 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:29:23 Download gff for
BO11024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18654993..18655143 | 12..162 | 99 | -> | Plus |
| arm_3L | 18655724..18656415 | 163..854 | 100 | | Plus |
BO11024.complete Sequence
2257 bp assembled on 2008-01-16
GenBank Submission: FJ631960
> BO11024.complete
GAAGTTATCAGTCGACATGATCAAGGGCATTCTGATACAGCGCAAGAGCC
AGGAGGATGCCAGCTACACCAAGCAGCTCAAGATGGAGCACGCCGATCTG
GTGGCCGAGATGCAGACCGTGGAGAGCCTGCCCACCCACGAGCGACTCCA
GCTGGCCAGACTACGTCGTGCGCAGCAGCTGAAGCTGTCCCGCCAGAAGG
ACAAGGAGTGGGCCAAGTTGCAGCGGGCGAAGGGCAACACGGCGAGCGGC
GGCAGCGGAACCGGATCGCTGGGCAACGGGCTGATGAACGGCAACGGAGA
TACCACGCACCACTTCCGGCACGCCAATGGTTCGGGCACGTTGAGCGGCA
GGCGGCACATATCCTTCGAGAACAGCGTGGTGCTCCTGGAGGCGGCATCC
CGGAACGACATGCCCGAGGTGGCCGCCCTGCTGCAGCACGGAATCACGCC
GGATGCCGCAAACGAGGATGGACTGACGGCGATGCATCAGGCGTGCATCG
ATAACAACGTCGAGATGCTGCAGCTGCTGCTGGAGTACGGTGCGAATGTG
GATGCGCAGGACAGTGATAAGTGGACGCCGCTTCATGCGGCTGCCACCTG
CGGCCACCTCGAGCTCGTCCGCATCCTCATCCGGCACGGCGCCAATCTGC
TGGCCGTCAACACCGACGGCAACATGCCCTACGACCTGTGCGACGATGAG
AAAACCTTGGACTTCATCGAGGGCGAGATGGCTCAACGGGGCGTGACCCA
GGAGCTCATCGACGAGACGCGCTCCTCCACGGAGCGGATTATGCTGCGCG
ACCTAATGGAGTTGGCGCGCACAGGAGGAGATTTGGAGGAGCCGGACTAC
CAGTGTGCAACGCCGCTTCACATAGCTGCTGCGAATGGATACGTCCGCGT
TGTGGAGTTTTTGTTGGAGCAGCATGTCAACGTGGATGCCATGGACAAGG
ATCTGTGGACACCGGTGCATGCCGCCGCTTGTTGGGGTCATCTTGAGGTG
CTGGAGATGCTGGCCCAGTGTGGTGCTGATCTGAATGTTCGCAACAAGGA
CGACGAGACTCCTTCAGACATCTGTGAAGATCCCGAAATCAGGGAGCGAA
TCGAACAGCTGAAGACGGAGCAGGAGAGCAAACGACTGGCCGAGGCGCAG
CGACGACGCGTTCGACGCTCACAGAGCAACAACACAAGAGCCCAATCAGT
GCGACGCACTAGTTTGCGAGACAAAACGCTGACAACCAAAAAGGATGCCG
TCGAGGAGACCCGGCTGCGTCTGCAGGCGCAGGAGGCGACGGACTCGGAG
GCTCCCTCATCGGCAGGGGATCCGCTGACCAATGGCTATGGTTACGGAAA
CAACAACGGAGAGAAGCGACCCTCGACGGGCAGTTCGAATGGCCAACCAC
TGCCGCACTCCAAGTCCGCCGATGCGCTGGATAATGCCACCGCCGCTTTG
TCGGCCAACGCCACACATTCCTATCCGTCGCGCCGTCCACCGGATGGCCG
GGAAAACGATGAACTGCTACGCCTGAAAGCTGCAGGTGCTGCGGGAGAGA
TGCAGCGAGCCACCTCGGCGGCGGCCGTCATTCTCACCGAGAAGGGTACG
GCGGCCAGTGCCGAGGCCGTTCAAATCCAGTCGTCGAAGGAGGCTGCCAA
CGGCAAGATCAATGTCCAGGTCACCGTCCTCGTGGACACCAATAGCACGC
ACCACCATCAGCAACATCAACAGCAGCAGCAGCAGCAGCAGCAACACCAC
CACCAGCAACACGTACTGCTGTTGCAGCAACACCAGCAGCTTCAGCAACA
TCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCATGTTGCCTTGGATG
GCTACAGCGCCACATTGGCCAATTTGAAGAAGCAACGCTCGCTTTCACGC
ACCGCCAATGTCCTCAATACTTTCGAATTGTCATCCCAAACAGCTAGCAA
TGCCCATCCAATTGCAGCAGCTAATGCCACAACAACTAATGGTTCTGTTT
TAGGAGCCGGCGGCAGCAGCAGCAACAACAACAACAACCTGAGCACCAGC
AACAACAACAACAACGGATCCGCACCGATCTCGACGCAGCCAACATTGGG
TCACATGGGCGCGGGAAGCGTGCTATCCGACTTCGAGGGCTCCTCGCCGG
CGGGCAGTTCGCTGAACAAGTTCAGCGGCATCACTGGCGACGTGGTCACC
GATAGCACCAGTTCCAGTCGCAGGTGTTGCGTCCTGATGGCAAGCTTTCT
AGACCAT
BO11024.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:22:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MYPT-75D-RD | 2226 | CG6896-PD | 1..2223 | 17..2239 | 11115 | 100 | Plus |
| MYPT-75D-RC | 2226 | CG6896-PC | 1..2223 | 17..2239 | 11115 | 100 | Plus |
| MYPT-75D-RA | 2226 | CG6896-PA | 1..2223 | 17..2239 | 11115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:22:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MYPT-75D-RD | 4016 | CG6896-RD | 866..3090 | 15..2239 | 11125 | 100 | Plus |
| MYPT-75D-RC | 4663 | CG6896-RC | 1513..3737 | 15..2239 | 11125 | 100 | Plus |
| MYPT-75D-RA | 3975 | CG6896-RA | 825..3049 | 15..2239 | 11125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:22:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18662624..18663326 | 163..865 | 3515 | 100 | Plus |
| 3L | 28110227 | 3L | 18665697..18666251 | 1685..2239 | 2775 | 100 | Plus |
| 3L | 28110227 | 3L | 18664322..18664820 | 1187..1685 | 2495 | 100 | Plus |
| 3L | 28110227 | 3L | 18661896..18662043 | 15..162 | 740 | 100 | Plus |
| 3L | 28110227 | 3L | 18663491..18663617 | 865..991 | 635 | 100 | Plus |
| 3L | 28110227 | 3L | 18664138..18664260 | 1066..1188 | 615 | 100 | Plus |
| 3L | 28110227 | 3L | 18663675..18663754 | 988..1067 | 385 | 98.8 | Plus |
| 2R | 25286936 | 2R | 21149567..21149716 | 1836..1686 | 225 | 78.1 | Minus |
| 3L | 28110227 | 3L | 9708998..9709108 | 1709..1816 | 220 | 82 | Plus |
| 2R | 25286936 | 2R | 24280735..24280796 | 1760..1699 | 220 | 90.3 | Minus |
| 3R | 32079331 | 3R | 23920490..23920542 | 1761..1709 | 205 | 92.5 | Minus |
| 3L | 28110227 | 3L | 8437716..8437847 | 1830..1699 | 195 | 76.5 | Minus |
| 2R | 25286936 | 2R | 15488416..15488475 | 1758..1699 | 195 | 88.3 | Minus |
| X | 23542271 | X | 9754981..9755118 | 1699..1836 | 195 | 76.1 | Plus |
| 2R | 25286936 | 2R | 17463013..17463062 | 1709..1758 | 190 | 92 | Plus |
Blast to na_te.dros performed 2014-11-27 20:22:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2512 | 1687..1836 | 368 | 73.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6821..7056 | 1648..1887 | 237 | 59.2 | Plus |
BO11024.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:11 Download gff for
BO11024.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RA | 1..2226 | 17..2240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:33:45 Download gff for
BO11024.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RA | 825..3047 | 17..2241 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:55 Download gff for
BO11024.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RA | 827..3049 | 17..2241 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:12 Download gff for
BO11024.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RA | 820..3056 | 12..2247 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:10 Download gff for
BO11024.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MYPT-75D-RA | 827..3049 | 17..2241 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:10 Download gff for
BO11024.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18661898..18662043 | 17..162 | 100 | -> | Plus |
| 3L | 18662624..18663326 | 163..865 | 100 | -> | Plus |
| 3L | 18663492..18663617 | 866..991 | 100 | -> | Plus |
| 3L | 18663679..18663754 | 992..1067 | 100 | -> | Plus |
| 3L | 18664140..18664260 | 1068..1188 | 100 | -> | Plus |
| 3L | 18664324..18664820 | 1189..1685 | 100 | -> | Plus |
| 3L | 18665698..18666251 | 1686..2241 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:55 Download gff for
BO11024.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18654998..18655143 | 17..162 | 100 | -> | Plus |
| arm_3L | 18655724..18656426 | 163..865 | 100 | -> | Plus |
| arm_3L | 18656592..18656717 | 866..991 | 100 | -> | Plus |
| arm_3L | 18656779..18656854 | 992..1067 | 100 | -> | Plus |
| arm_3L | 18657240..18657360 | 1068..1188 | 100 | -> | Plus |
| arm_3L | 18657424..18657920 | 1189..1685 | 100 | -> | Plus |
| arm_3L | 18658798..18659351 | 1686..2241 | 99 | | Plus |
BO11024.pep Sequence
Translation from 16 to 2257
> BO11024.pep
MIKGILIQRKSQEDASYTKQLKMEHADLVAEMQTVESLPTHERLQLARLR
RAQQLKLSRQKDKEWAKLQRAKGNTASGGSGTGSLGNGLMNGNGDTTHHF
RHANGSGTLSGRRHISFENSVVLLEAASRNDMPEVAALLQHGITPDAANE
DGLTAMHQACIDNNVEMLQLLLEYGANVDAQDSDKWTPLHAAATCGHLEL
VRILIRHGANLLAVNTDGNMPYDLCDDEKTLDFIEGEMAQRGVTQELIDE
TRSSTERIMLRDLMELARTGGDLEEPDYQCATPLHIAAANGYVRVVEFLL
EQHVNVDAMDKDLWTPVHAAACWGHLEVLEMLAQCGADLNVRNKDDETPS
DICEDPEIRERIEQLKTEQESKRLAEAQRRRVRRSQSNNTRAQSVRRTSL
RDKTLTTKKDAVEETRLRLQAQEATDSEAPSSAGDPLTNGYGYGNNNGEK
RPSTGSSNGQPLPHSKSADALDNATAALSANATHSYPSRRPPDGRENDEL
LRLKAAGAAGEMQRATSAAAVILTEKGTAASAEAVQIQSSKEAANGKINV
QVTVLVDTNSTHHHQQHQQQQQQQQQHHHQQHVLLLQQHQQLQQHQQQQQ
QQQQQQHVALDGYSATLANLKKQRSLSRTANVLNTFELSSQTASNAHPIA
AANATTTNGSVLGAGGSSSNNNNNLSTSNNNNNGSAPISTQPTLGHMGAG
SVLSDFEGSSPAGSSLNKFSGITGDVVTDSTSSSRRCCVLMASFLDH
BO11024.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:21:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MYPT-75D-PD | 741 | CG6896-PD | 1..741 | 1..741 | 3793 | 100 | Plus |
| MYPT-75D-PC | 741 | CG6896-PC | 1..741 | 1..741 | 3793 | 100 | Plus |
| MYPT-75D-PA | 741 | CG6896-PA | 1..741 | 1..741 | 3793 | 100 | Plus |
| MYPT-75D-PB | 635 | CG6896-PB | 1..556 | 1..556 | 2839 | 100 | Plus |
| Mbs-PK | 860 | CG32156-PK | 35..687 | 101..728 | 543 | 27.2 | Plus |
| MYPT-75D-PB | 635 | CG6896-PB | 513..635 | 623..741 | 411 | 70.1 | Plus |
