Clone BO11075 Report

Search the DGRC for BO11075

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:110
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG9164-RA
Protein status:BO11075.pep: validated full length
Sequenced Size:985

Clone Sequence Records

BO11075.5prime Sequence

864 bp (744 high quality bases) assembled on 2006-04-19

> BO11075.5prime
GAAGTTATCAGTCGACATGGCACTACAAGGCTGGCGCTTTTTCGGTGTCT
CGGCAACCATCATCATCTACATCGGCGGCGTCCTGTTCCTCTCCATGAAC
AACATACCCGGATCGCATCCCAAAAGACCGCGCATCGAACGTTTCGCCGA
GTTTCCCAGCTTTCATAGTCCTCGGTTTCCGATGCCCAGCCGCAAGATGA
CGATACGCTGGTGTCGCGACCTCAAGTACATAAATCGAGATCTTCCAATC
TACGCGGATTACAAGTCCGACTTCTACACGGCCCTGCCCAGTGACGTCAG
TGCTGCCCTGCAATCGCTGCCAGCGTTGACCGCCCTGGCCAGTTTTCCTG
GCAGCGGTAACACGTGGCTAAGGTACTTGCTCCAGCAGGCCACCGGCATC
CTGACGGGCAGCATCTACAAGGACTACGGCCTGCTGAAGACCGGCTTTCC
GGCGGAGAACGTCTGCAACAGTTCAGTATTATTGGTGAAGACCCACGAGT
GGGGCAGCAAAGCGTGGGCGCCCTTCTCGAAAGCAATTCTTCTCGTCCGC
GATCCGGAGAAAGCGATCATCGCGGAGTTCAATCGCCAGAGTGGCGGTCA
CATCGGATTCGCATCACCGGATCGCTACAAGCGCACCAAGGGAAAATACT
GGCAGCAATTCGTGAGCAACAAGCTCAAGGGCTGGGAGATGATGAAACTC
AGCTGGGCGCGCAACTTCACGGGCAGCATCAAGGTGGTGTTCTACGACGA
CCTGGTCCACCATACGGAGCGGGAGCTGCGCTCCATTCTGGACTTCCTGC
AGTTCCCCATCAACGAGCAACTGATGCGGTGCGCCATTATGCGGAAGGAG
GGCATCTTCCGGCG

BO11075.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-PC 954 CG9164-RC 1..848 17..864 4215 99.8 Plus
CG9164-PA 954 CG9164-RA 1..848 17..864 4215 99.8 Plus
CG9164-PB 954 CG9164-RB 1..848 17..864 4215 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 4420 CG9164-RD 2758..3609 13..864 4230 99.8 Plus
CG9164-RB 1781 CG9164-RB 119..970 13..864 4230 99.8 Plus
CG9164-RC 2476 CG9164-RC 546..1397 13..864 4230 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:36:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15381802..15382170 647..279 1845 100 Minus
X 23542271 X 15381450..15381666 864..648 1070 99.5 Minus
X 23542271 X 15382546..15382684 151..13 680 99.3 Minus
X 23542271 X 15382229..15382357 278..150 645 100 Minus
Blast to na_te.dros performed on 2015-02-12 04:36:55 has no hits.

BO11075.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:57:30 Download gff for BO11075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PC 1..848 17..864 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:17:45 Download gff for BO11075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PB 1..848 17..864 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:47:55 Download gff for BO11075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 546..1397 13..864 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:06 Download gff for BO11075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 546..1397 13..864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:06 Download gff for BO11075.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15382546..15382684 13..151 99   Minus
X 15381450..15381666 648..864 99 <- Minus
X 15381802..15382170 279..647 100 <- Minus
X 15382229..15382355 152..278 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:47:55 Download gff for BO11075.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15275483..15275699 648..864 99 <- Minus
arm_X 15275835..15276203 279..647 100 <- Minus
arm_X 15276262..15276388 152..278 100 <- Minus
arm_X 15276579..15276717 13..151 99   Minus

BO11075.3prime Sequence

737 bp (733 high quality bases) assembled on 2006-04-19

> BO11075.3prime
ATGGTCTAGAAAGCTTGCCGGCTCCTGACGCCCCAGCAATCCGTACACGA
TGCGCCGTCGATTCTGCACCTCCGCTCTCATGGATTCCGTATAGGGATCG
AAAGATAACAGACGTTTCTTCCGCCGGAAGATGCCCTCCTTCCGCATAAT
GGCGCACCGCATCAGTTGCTCGTTGATGGGGAACTGCAGGAAGTCCAGAA
TGGAGCGCAGCTCCCGCTCCGTATGGTGGACCAGGTCGTCGTAGAACACC
ACCTTGATGCTGCCCGTGAAGTTGCGCGCCCAGCTGAGGTTCATCATCTC
CCAGCCCTTGAGCTTGTTGCTCACGAATTGCTGCCAGTATTTTCCCTTGG
TGCGCTTGTAGCGATCCGGTGATGCGAATCCGATGTGACCGCCACTCTGG
CGATTGAACTCCGCGATGATCGCTTTCTCCGGATCGCGGACGAGAAGAAT
TGCTTTCGAGAAGGGCGCCCACGCTTTGCTGCCCCACTCGTGGGTCTTCA
CCAATAATACTGAACTGTTGCAGACGTTCTCCGCCGGAAAGCCGGTCTTC
AGCAGGCCGTAGTCCTTGTAGATGCTGCCCGTCAGGATGCCGGTGGCCTG
CTGGAGCAAGTACCTTAGCCACGTGTTACCGCTGCCAGGAAAACTGGCCA
GGGCGGTCAACGCTGGCAGCGATTGCAGGGCAGCACTGACGTCACTGGGC
AGGGCCGTGTAGAAGTCGGACTTGTAATCCGCGTAGA

BO11075.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-PC 954 CG9164-RC 233..951 737..19 3595 100 Minus
CG9164-PA 954 CG9164-RA 233..951 737..19 3595 100 Minus
CG9164-PB 954 CG9164-RB 233..951 737..19 3595 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 16:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 4420 CG9164-RD 2994..3712 737..19 3595 100 Minus
CG9164-RB 1781 CG9164-RB 355..1073 737..19 3595 100 Minus
CG9164-RC 2476 CG9164-RC 782..1500 737..19 3595 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 16:38:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15381802..15382170 339..707 1845 100 Plus
X 23542271 X 15381347..15381666 19..338 1600 100 Plus
Blast to na_te.dros performed on 2015-02-03 16:38:56 has no hits.

BO11075.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:57:28 Download gff for BO11075.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PC 234..954 18..736 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:17:44 Download gff for BO11075.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-PB 234..954 18..736 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:28:56 Download gff for BO11075.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 783..1500 19..736 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 18:56:08 Download gff for BO11075.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 783..1500 19..736 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 18:56:08 Download gff for BO11075.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15381348..15381666 20..338 100 <- Plus
X 15381802..15382170 339..707 100 <- Plus
X 15382229..15382257 708..736 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:28:56 Download gff for BO11075.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15275381..15275699 20..338 100 <- Plus
arm_X 15275835..15276203 339..707 100 <- Plus
arm_X 15276262..15276290 708..736 100   Plus

BO11075.complete Sequence

985 bp (985 high quality bases) assembled on 2006-03-24

GenBank Submission: FJ631987

> BO11075.complete
GAAGTTATCAGTCGACATGGCACTACAAGGCTGGCGCTTTTTCGGTGTCT
CGGCAACCATCATCATCTACATCGGCGGCGTCCTGTTCCTCTCCATGAAC
AACATACCCGGATCGCATCCCAAAAGACCGCGCATCGAACGTTTCGCCGA
GTTTCCCAGCTTTCATAGTCCTCGGTTTCCGATGCCCAGCCGCAAGATGA
CGATACGCTGGTGTCGCGACCTCAAGTACATAAATCGAGATCTTCCAATC
TACGCGGATTACAAGTCCGACTTCTACACGGCCCTGCCCAGTGACGTCAG
TGCTGCCCTGCAATCGCTGCCAGCGTTGACCGCCCTGGCCAGTTTTCCTG
GCAGCGGTAACACGTGGCTAAGGTACTTGCTCCAGCAGGCCACCGGCATC
CTGACGGGCAGCATCTACAAGGACTACGGCCTGCTGAAGACCGGCTTTCC
GGCGGAGAACGTCTGCAACAGTTCAGTATTATTGGTGAAGACCCACGAGT
GGGGCAGCAAAGCGTGGGCGCCCTTCTCGAAAGCAATTCTTCTCGTCCGC
GATCCGGAGAAAGCGATCATCGCGGAGTTCAATCGCCAGAGTGGCGGTCA
CATCGGATTCGCATCACCGGATCGCTACAAGCGCACCAAGGGAAAATACT
GGCAGCAATTCGTGAGCAACAAGCTCAAGGGCTGGGAGATGATGAACCTC
AGCTGGGCGCGCAACTTCACGGGCAGCATCAAGGTGGTGTTCTACGACGA
CCTGGTCCACCATACGGAGCGGGAGCTGCGCTCCATTCTGGACTTCCTGC
AGTTCCCCATCAACGAGCAACTGATGCGGTGCGCCATTATGCGGAAGGAG
GGCATCTTCCGGCGGAAGAAACGTCTGTTATCTTTCGATCCCTATACGGA
ATCCATGAGAGCGGAGGTGCAGAATCGACGGCGCATCGTGTACGGATTGC
TGGGGCGTCAGGAGCCGGCAAGCTTTCTAGACCAT

BO11075.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 954 CG9164-PD 1..951 17..967 4755 100 Plus
CG9164-RB 954 CG9164-PB 1..951 17..967 4755 100 Plus
CG9164-RC 954 CG9164-PC 1..951 17..967 4755 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-RD 4420 CG9164-RD 2758..3712 13..967 4760 99.9 Plus
CG9164-RB 1781 CG9164-RB 119..1073 13..967 4760 99.9 Plus
CG9164-RC 2476 CG9164-RC 546..1500 13..967 4760 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15381802..15382170 647..279 1845 100 Minus
X 23542271 X 15381347..15381666 967..648 1600 100 Minus
X 23542271 X 15382546..15382684 151..13 680 99.3 Minus
X 23542271 X 15382229..15382357 278..150 645 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:24:36 has no hits.

BO11075.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:56:17 Download gff for BO11075.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RB 1..954 17..968 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:28:46 Download gff for BO11075.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RB 119..1073 13..967 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:22 Download gff for BO11075.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 550..1500 17..969 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:56:18 Download gff for BO11075.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RB 119..1073 13..967 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:51 Download gff for BO11075.complete
Subject Subject Range Query Range Percent Splice Strand
CG9164-RC 550..1500 17..969 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:51 Download gff for BO11075.complete
Subject Subject Range Query Range Percent Splice Strand
X 15381345..15381666 648..969 99 <- Minus
X 15381802..15382170 279..647 100 <- Minus
X 15382229..15382355 152..278 100 <- Minus
X 15382546..15382680 17..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:22 Download gff for BO11075.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15275378..15275699 648..969 99 <- Minus
arm_X 15275835..15276203 279..647 100 <- Minus
arm_X 15276262..15276388 152..278 100 <- Minus
arm_X 15276579..15276713 17..151 100   Minus

BO11075.pep Sequence

Translation from 16 to 985

> BO11075.pep
MALQGWRFFGVSATIIIYIGGVLFLSMNNIPGSHPKRPRIERFAEFPSFH
SPRFPMPSRKMTIRWCRDLKYINRDLPIYADYKSDFYTALPSDVSAALQS
LPALTALASFPGSGNTWLRYLLQQATGILTGSIYKDYGLLKTGFPAENVC
NSSVLLVKTHEWGSKAWAPFSKAILLVRDPEKAIIAEFNRQSGGHIGFAS
PDRYKRTKGKYWQQFVSNKLKGWEMMNLSWARNFTGSIKVVFYDDLVHHT
ERELRSILDFLQFPINEQLMRCAIMRKEGIFRRKKRLLSFDPYTESMRAE
VQNRRRIVYGLLGRQEPASFLDH

BO11075.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG9164-PD 317 CG9164-PD 1..317 1..317 1679 100 Plus
CG9164-PB 317 CG9164-PB 1..317 1..317 1679 100 Plus
CG9164-PC 317 CG9164-PC 1..317 1..317 1679 100 Plus