Clone BO11086 Report

Search the DGRC for BO11086

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:110
Well:86
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO11086.pep: validated full length
Sequenced Size:2698

Clone Sequence Records

BO11086.3prime Sequence

874 bp (766 high quality bases) assembled on 2006-04-19

> BO11086.3prime
ATGGTCTAGAAAGCTTGCATCCGCAATGGCCGTGTAGGGTAGACTGCTGT
GCTTCGGCTTCGTCTTGTTGATGAACACCTTGATGGCGCCATTGAAATCG
GCGCTGACCAACACATAACCACATCCCTTTTTGTGCTGCTCGACCAGTGG
ATCCGGCTGATTGTGAGCCAACTTCTCATTGGAGATCTCATCCGGTTCGG
GCTTGATGATAGCCTCTGGGTGTGGCGCGAATATGGCACAAGTGACCGTA
GCATTGTGTGCTTTAATGCCTTCCCAAAAGTCGCTGCGATCGCGGCGAAC
AGAACTGAGTTTTGAGTAATCGTGGTTTGTTTTCCAAATATAGATGCACT
GATTCTCGGACCCGGCTATGATGTACTTTCCATCGTGGCTGAACGAGCCC
TTAATTTGCGAGGACACATTCAAGTAGCCCTTGTACTTGCAGGACAAGTT
CAAGTCCCTCAAATCGTACAGGCGCACTCTGCTGTCGTTGGATGTGACTA
GAATCTTGTCTTCGCCGGGCATCGGTTCAATGCCACTGATCTTGCGGCCA
ATGCGGTTTTTACCCCTGGTGGAGCGCACATGAATCTGCGTGTGGTATTT
CAGCTGATCCGTGTTATAAAATATGCAGCGACCATCGTAGCTCCCTACAA
CGGCGAACTGTCCATTTTGGCAGAAGTTGGCAGCCGTTATAAGCTTTGTC
TGGCCATCTACCTCATTCCACAGTGCCACCTTTTTGTCGGGTATGTTCCA
CAACCTTAGTTTGCCATCGAGGCTGCCACTCAAAAGTAGCGATCATCGCG
TGGATGGAACGCAATAGCGGTGACAAAATCGATATGCTGAAAACAGCAAA
GGCACTCCTTTCTGGAAATGTGCC

BO11086.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-PA 3339 CG34133-RA 2570..3336 785..19 3835 100 Minus
CG34133-PB 3237 CG34133-RB 2468..3234 785..19 3835 100 Minus
CG34133-PA 3339 CG34133-RA 2480..2572 874..782 465 100 Minus
CG34133-PB 3237 CG34133-RB 2378..2470 874..782 465 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:46:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 4263 CG34133-RC 2811..3667 874..19 4260 99.9 Minus
CG34133-RE 4209 CG34133-RE 2757..3613 874..19 4260 99.9 Minus
CG34133-RB 3831 CG34133-RB 2721..3577 874..19 4260 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:46:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29873568..29874144 874..299 2835 99.8 Minus
3R 32079331 3R 29874409..29874563 173..19 775 100 Minus
3R 32079331 3R 29874205..29874346 300..159 665 97.9 Minus
Blast to na_te.dros performed on 2015-02-12 10:46:38 has no hits.

BO11086.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:57:51 Download gff for BO11086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7814-PA 1808..2667 18..874 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:18:12 Download gff for BO11086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-PB 2378..3237 18..874 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 02:04:30 Download gff for BO11086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 2721..3585 10..874 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:19:04 Download gff for BO11086.3prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 2721..3585 10..874 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:19:04 Download gff for BO11086.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 29873568..29874142 301..874 99 -> Minus
3R 29874205..29874333 172..300 100 -> Minus
3R 29874411..29874571 10..171 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 02:04:30 Download gff for BO11086.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25699290..25699864 301..874 99 -> Minus
arm_3R 25699927..25700055 172..300 100 -> Minus
arm_3R 25700133..25700293 10..171 97   Minus

BO11086.5prime Sequence

838 bp (791 high quality bases) assembled on 2006-04-19

> BO11086.5prime
GAAGTTATCAGTCGACATGAGCACGCCCAGGGTGTCGCCCAAGCATCAGC
AGAGTGGTAAGGAAGTAGCCGCCACCACGACAGGGATTCCTAGTGCCGCA
TCCTCCGCGCAGAGCTCTGGTGTTGGCTCGATGGTTTTGCAGGAACCAGA
TGTGATAGCAAGCACAAAGCTTGCCCAGTCTAAAACTACTGATTCCATCA
CCTCGTCGGGACCCGTGGCGCCACCGCGAAGAAAGAAGAAGTCTCGTAAT
TGCTCCATCAGTTCCTCAGATCAGTATAGTCTTCCTCCTGCGGACAACGA
AGACACTGATAGTGATACGCGGTCTGTGAAGAGTGTGCAGGGTCTTCAGC
AAAAGCTGCGGGATGACTTTGTCATGGAGTTCGAGAGCTCTCTTAACAAT
GCAACTAGTTCAGCCTCCAATATCACCCTGACCTGCTCCTCCACCAATAC
AGTTGTTTCTGCATCGGCTTCGACTTCGGCAGCATCTTCGTCCTTGCCAT
CAACAATTGCAATTCATATGCGCCCCATGGTCGCTTCGGTCACCATTGCT
GGTCCAAAACTCACTCAATCTCTGGGCAGCAGTTCCACGTCGGTCCACTC
CAAGCCAAGTCCATCAAATTCAGCGAAAAGCAATTCCGCACCAGCGAGGG
TTAGTTCCATTGATCCGAATCAGGGTCTGAATCTGTTTAAGGCCATCCAG
GGAGGTTATGTGGTGAAACCACGCGACGAGGCCAGCAACAAGGCGCAAGG
CCCATCCCAAGATGAAATCGAGCGCATTGAGAAAATGCTGATGGAAAGCG
CGAACCGACCAAAGCTGGCGGGAACGGGATCCAACAGT

BO11086.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-PA 3339 CG34133-RA 673..1494 17..838 4110 100 Plus
CG34133-PB 3237 CG34133-RB 571..1392 17..838 4110 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 4263 CG34133-RC 1004..1825 17..838 4110 100 Plus
CG34133-RE 4209 CG34133-RE 1004..1825 17..838 4110 100 Plus
CG34133-RB 3831 CG34133-RB 914..1735 17..838 4110 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29871586..29872223 17..654 3190 100 Plus
3R 32079331 3R 29872281..29872467 652..838 935 100 Plus
Blast to na_te.dros performed on 2015-02-10 23:51:30 has no hits.

BO11086.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:57:52 Download gff for BO11086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7814-PA 1..822 17..838 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:18:14 Download gff for BO11086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-PB 567..1392 13..838 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:29:20 Download gff for BO11086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 910..1735 13..838 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 01:19:18 Download gff for BO11086.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 910..1735 13..838 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 01:19:18 Download gff for BO11086.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 29871582..29872223 13..654 99 -> Plus
3R 29872284..29872467 655..838 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:29:20 Download gff for BO11086.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25697304..25697945 13..654 99 -> Plus
arm_3R 25698006..25698189 655..838 100   Plus

BO11086.complete Sequence

2698 bp assembled on 2007-11-02

GenBank Submission: FJ631993

> BO11086.complete
GAAGTTATCAGTCGACATGAGCACGCCCAGGGTGTCGCCCAAGCATCAGC
AGAGTGGTAAGGAAGTAGCCGCCACCACGACAGGGATTCCTAGTGCCGCA
TCCTCCGCGCAGAGCTCTGGTGTTGGCTCGATGGTTTTGCAGGAACCAGA
TGTGATAGCAAGCACAAAGCTTGCCCAGTCTAAAACTACTGATTCCATCA
CCTCGTCGGGACCCGTGGCGCCACCGCGAAGAAAGAAGAAGTCTCGTAAT
TGCTCCATCAGTTCCTCAGATCAGTATAGTCTTCCTCCTGCGGACAACGA
AGACACTGATAGTGATACGCGGTCTGTGAAGAGTGTGCAGGGTCTTCAGC
AAAAGCTGCGGGATGACTTTGTCATGGAGTTCGAGAGCTCTCTTAACAAT
GCAACTAGTTCAGCCTCCAATATCACCCTGACCTGCTCCTCCACCAATAC
AGTTGTTTCTGCATCGGCTTCGACTTCGGCAGCATCTTCGTCCTTGCCAT
CAACAATTGCAATTCATATGCGCCCCATGGTCGCTTCGGTCACCATTGCT
GGTCCAAAACTCACTCAATCTCTGGGCAGCAGTTCCACGTCGGTCCACTC
CAAGCCAAGTCCATCAAATTCAGCGAAAAGCAATTCCGCACCAGCGAGGG
TTAGTTCCATTGATCCGAATCAGGGTCTGAATCTGTTTAAGGCCATCCAG
GGAGGTTATGTGGTGAAACCACGCGACGAGGCCAGCAACAAGGCGCAAGG
CCCATCCCAAGATGAAATCGAGCGCATTGAGAAAATGCTGATGGAAAGCG
CGAACCGACCAAAGCTGGCGGGAACGGGATCCAACAGTTTAGGAAGCTCT
ACACGCTATCCCGGATTTTATCGCGGTGTTAACGATAAGGAGCGCCGGAA
GTCCGCTGGCGACGAAGATGTGCTCAAACAGATGAACATTTATGTGCGCA
CGCGAACCAGCTCAGGCAAGCAGCTAACCGACTTTGAGATCCTTGAACAA
GTTCCTGTTAAAAATTTAGACACGGGAGAAAATATGCCTCTATCCGAAAT
GCGTTCACCACCAGTGCCTGAGGGATGGAATCCGCTCTCGCTACACATCC
TTAAGCTGACCTCCCACCTGGAGGTGATCCAGAAGGAGTCCGACGAGGAG
AGTGTGATTGGCATACCGCCTAGCATCGAGGGTCAGCAGCCCGACGAAGA
AGAACTGGAAACGGAAGATGGCAGTCGACTGAAAAAGAAAACGGCCCGGA
TCAAGAGGTTCTTTGGCAGCACAATGCGAAAGACGGTGGACAAGGCCAAG
TCGATTGCATCCGAAGTGTCGCATGCGCGACACAAAGAGGATGTGGCTGA
TATTGTTGATGCAATGAATCCCGAGCAAAATATCAAAATCAAGGCTTCCT
CGTCCAACAAGGGACCCTATGAGTTTACCAAACTGCAGCACGTCCAGGAT
TTGAGTGGCGAAGATACCAGTGCCGTGTGGTGCATGAAGTTCAGTTCCTG
CGGTCGACTCCTGGCCACTGCTGGACAGGACAAGGTGTTAAGGATTTGGG
TTCTTAAAGATGCCTATCCGTTTTTCCAGGACATGCGCAACAAATACAAT
GCTGACCAAAAATCCTCACCTACGCCCTCGCAAGAGTCACTCGTCTCGCA
GCATTCGGCTGAGGAAGCCATTGCCATGGCTACTGCCGCAGAGAAATGCA
CGGGCCCCTTCATGCCAAAGCCCTTCTGCACCTACAATGGACACACCTCC
GATTTACTGGACGTCAGCTGGTCAAAGAATTACTTCATACTGTCAAGCAG
CATGGACAAGACTGTGCGGCTCTGGCACATTTCCAGAAAGGAGTGCCTTT
GCTGTTTTCAGCATATCGATTTTGTCACCGCTATTGCGTTCCATCCACGC
GATGATCGCTACTTTTTGAGTGGCAGCCTCGATGGCAAACTAAGGTTGTG
GAACATACCCGACAAAAAGGTGGCACTGTGGAATGAGGTAGATGGCCAGA
CAAAGCTTATAACGGCTGCCAACTTCTGCCAAAATGGACAGTTCGCCGTT
GTAGGGAGCTACGATGGTCGCTGCATATTTTATAACACGGATCAGCTGAA
ATACCACACGCAGATTCATGTGCGCTCCACCAGGGGTAAAAACCGCATTG
GCCGCAAGATCAGTGGCATTGAACCGATGCCCGGCGAAGACAAGATTCTA
GTCACATCCAACGACAGCAGAGTGCGCCTGTACGATTTGAGGGACTTGAA
CTTGTCCTGCAAGTACAAGGGCTACTTGAATGTGTCCTCGCAAATTAAGG
GCTCGTTCAGCCACGATGGAAAGTACATCATAGCCGGGTCCGAGAATCAG
TGCATCTATATTTGGAAAACAAACCACGATTACTCAAAACTCAGTTCTGT
TCGCCGCGATCGCAGCGACTTTTGGGAAGGCATTAAAGCACACAATGCTA
CGGTCACTTGTGCCATATTCGCGCCACACCCAGAGGCTATCATCAAGCCC
GAACCGGATGAGATCTCCAATGAGAAGTTGGCTCACAATCAGCCGGATCC
ACTGGTCGAGCAGCACAAAAAGGGATGTGGTTATGTGTTGGTCAGCGCCG
ATTTCAATGGCGCCATCAAGGTGTTCATCAACAAGACGAAGCCGAAGCAC
AGCAGTCTACCCTACACGGCCATTGCGGATGCAAGCTTTCTAGACCAT

BO11086.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 3327 CG34133-PC 661..3324 17..2680 13320 100 Plus
CG34133-RB 3237 CG34133-PB 571..3234 17..2680 13320 100 Plus
CG34133-RE 3273 CG34133-PE 1608..3270 1018..2680 8315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-RC 4263 CG34133-RC 1004..3667 17..2680 13320 100 Plus
CG34133-RB 3831 CG34133-RB 914..3577 17..2680 13320 100 Plus
CG34133-RE 4209 CG34133-RE 1951..3613 1018..2680 8315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29873322..29874144 1578..2400 4115 100 Plus
3R 32079331 3R 29872540..29873265 855..1580 3630 100 Plus
3R 32079331 3R 29871586..29872223 17..654 3190 100 Plus
3R 32079331 3R 29872281..29872488 652..859 1025 99.5 Plus
3R 32079331 3R 29874409..29874563 2526..2680 775 100 Plus
3R 32079331 3R 29874205..29874346 2399..2540 665 97.9 Plus
Blast to na_te.dros performed on 2014-11-27 01:06:30 has no hits.

BO11086.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:27 Download gff for BO11086.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 567..3237 13..2681 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:00:51 Download gff for BO11086.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 905..3580 13..2689 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:45:12 Download gff for BO11086.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 914..3577 17..2682 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:29:37 Download gff for BO11086.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 909..3572 17..2682 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:18:39 Download gff for BO11086.complete
Subject Subject Range Query Range Percent Splice Strand
CG34133-RB 914..3577 17..2682 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:18:39 Download gff for BO11086.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29871586..29872223 17..654 100 -> Plus
3R 29872284..29872484 655..855 100 -> Plus
3R 29872541..29873264 856..1579 100 -> Plus
3R 29873324..29874142 1580..2398 100 -> Plus
3R 29874205..29874333 2399..2527 100 -> Plus
3R 29874411..29874563 2528..2682 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:45:12 Download gff for BO11086.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25697308..25697945 17..654 100 -> Plus
arm_3R 25698006..25698206 655..855 100 -> Plus
arm_3R 25698263..25698986 856..1579 100 -> Plus
arm_3R 25699046..25699864 1580..2398 100 -> Plus
arm_3R 25699927..25700055 2399..2527 100 -> Plus
arm_3R 25700133..25700285 2528..2682 98   Plus

BO11086.pep Sequence

Translation from 16 to 2698

> BO11086.pep
MSTPRVSPKHQQSGKEVAATTTGIPSAASSAQSSGVGSMVLQEPDVIAST
KLAQSKTTDSITSSGPVAPPRRKKKSRNCSISSSDQYSLPPADNEDTDSD
TRSVKSVQGLQQKLRDDFVMEFESSLNNATSSASNITLTCSSTNTVVSAS
ASTSAASSSLPSTIAIHMRPMVASVTIAGPKLTQSLGSSSTSVHSKPSPS
NSAKSNSAPARVSSIDPNQGLNLFKAIQGGYVVKPRDEASNKAQGPSQDE
IERIEKMLMESANRPKLAGTGSNSLGSSTRYPGFYRGVNDKERRKSAGDE
DVLKQMNIYVRTRTSSGKQLTDFEILEQVPVKNLDTGENMPLSEMRSPPV
PEGWNPLSLHILKLTSHLEVIQKESDEESVIGIPPSIEGQQPDEEELETE
DGSRLKKKTARIKRFFGSTMRKTVDKAKSIASEVSHARHKEDVADIVDAM
NPEQNIKIKASSSNKGPYEFTKLQHVQDLSGEDTSAVWCMKFSSCGRLLA
TAGQDKVLRIWVLKDAYPFFQDMRNKYNADQKSSPTPSQESLVSQHSAEE
AIAMATAAEKCTGPFMPKPFCTYNGHTSDLLDVSWSKNYFILSSSMDKTV
RLWHISRKECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDK
KVALWNEVDGQTKLITAANFCQNGQFAVVGSYDGRCIFYNTDQLKYHTQI
HVRSTRGKNRIGRKISGIEPMPGEDKILVTSNDSRVRLYDLRDLNLSCKY
KGYLNVSSQIKGSFSHDGKYIIAGSENQCIYIWKTNHDYSKLSSVRRDRS
DFWEGIKAHNATVTCAIFAPHPEAIIKPEPDEISNEKLAHNQPDPLVEQH
KKGCGYVLVSADFNGAIKVFINKTKPKHSSLPYTAIADASFLDH

BO11086.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG34133-PC 1108 CG34133-PC 221..1108 1..888 4595 100 Plus
CG34133-PB 1078 CG34133-PB 191..1078 1..888 4595 100 Plus
CG34133-PE 1090 CG34133-PE 221..1090 1..888 4476 98 Plus
wds-PB 361 CG17437-PB 40..338 452..822 207 22.7 Plus
wds-PA 361 CG17437-PA 40..338 452..822 207 22.7 Plus