Clone BO11092 Report

Search the DGRC for BO11092

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:110
Well:92
Vector:pDNR-Dual
Associated Gene/Transcripttkv-RD
Protein status:BO11092.pep: validated full length
Sequenced Size:1561

Clone Sequence Records

BO11092.3prime Sequence

832 bp (830 high quality bases) assembled on 2006-04-19

> BO11092.3prime
ATGGTCTAGAAAGCTTGCGACAATCTTAATGGGCACATCGATTAGACAGT
CTGTTTCCAGTCGCCCCAGCGTCTTCTTTACGCGCAGGGCAGTCAGCCGA
ACGGTGGGATTCGGGTGCCAGCACTCCTGCATGATCTTGGATACGGTGGC
GAGTACATCATCCTCCTGCCAGCGTGATGGTATCGGCGGCCGGAAACCCT
TTACGCACACAACAGCGTGCATGTCCTCGAACGTGGGATCCGAGGGCACC
ACATCGTGATAGGGCAGGGCGTAGTCCTCGCAGGTGGTCGTCTTGGTGCC
CGATACGGGTGTGTAGCAGCGACGGGTCATCTCCCACAGAACGAGACCCA
CTGAATACATATCAGCCCGTTTGAACTCTTCAAACTGCTTGGGATCCAGC
TGCTGACTCAATACTTCTGGAGCCATGTAGCGTCGAGTGCCGACACGTGG
ATTCTGTGCAATGTGAATGACATCCAGTTCCGAGTTGTACTTCACTGCCA
GCCCGAAGTCAGCAATAGCGCACTGCCCATTCCGCTTGACCAAAATGTTC
TTGCTCTTGATATCGCGATGAGCGATAGCTGGTTTGCCAGGGGTTCCGAA
AATCTCGTCGTGCAGGTGGGCCAATCCGGAGGCCAGCGAAAACGCCAGCA
ATTGCAGCTTCTGCGGATTGATCACCGACATTGAGAGGTAATCGTGTAGG
CTGCCCATCTCGTGGTAGTCGGTGATCAGCAACATCTGTGTCCAGCTACC
ATTACCCTTGATATCGGCGGCAATGAAGCCCAAGATATTGTCGTGTCGCA
TCAGCACTGTCTGATAGATTTCAGTCTCGCGG

BO11092.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14026-PC 1728 tkv-RC 912..1725 832..19 4070 100 Minus
CG14026-PB 1596 tkv-RB 780..1593 832..19 4070 100 Minus
CG14026-PD 1530 tkv-RD 714..1527 832..19 4070 100 Minus
CG14026-PA 1692 tkv-RA 876..1689 832..19 4070 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:56:41
Subject Length Description Subject Range Query Range Score Percent Strand
tkv-RA 2846 CG14026-RA 937..1750 832..19 4070 100 Minus
tkv-RD 3616 CG14026-RD 1707..2520 832..19 4070 100 Minus
tkv-RB 3129 CG14026-RB 1220..2033 832..19 4070 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:56:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5220096..5220909 19..832 4070 100 Plus
Blast to na_te.dros performed on 2015-02-11 11:56:39 has no hits.

BO11092.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:57:59 Download gff for BO11092.3prime
Subject Subject Range Query Range Percent Splice Strand
tkv-PC 912..1728 15..832 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:18:25 Download gff for BO11092.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14026-PA 876..1692 15..832 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:30:56 Download gff for BO11092.3prime
Subject Subject Range Query Range Percent Splice Strand
tkv-RB 1220..2042 8..832 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:21:09 Download gff for BO11092.3prime
Subject Subject Range Query Range Percent Splice Strand
tkv-RB 1220..2042 8..832 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:21:09 Download gff for BO11092.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 5220087..5220909 8..832 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:30:56 Download gff for BO11092.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5220087..5220909 8..832 99   Plus

BO11092.5prime Sequence

899 bp (777 high quality bases) assembled on 2006-04-19

> BO11092.5prime
GAAGTTATCAGTCGACATGGCGCCGAAATCCAGAAAGAAGAAGGCTCATG
CCCGCTCCCTAACCTGCTACTGCGATGGCAGTTGTCCGGACAATGTAAGC
AATGGAACCTGCGAGACCAGACCCGGTGGCAGTTGCTTCAGCGCAGTCCA
ACAGCTTTACGATGAGACGACCGGGATGTACGAGGAGGAGCGTACATATG
GATGCATGCCTCCCGAAGACAACGGTGGTTTTCTCATGTGCAAGGTAGCC
GCTGTACCCCACCTGCATGGCAAGAACATTGTCTGCTGCGACAAGGAGGA
CTTCTGCAACCGTGACCTGTACCCCACCTACACACCCAAGCTGACCACAC
CAGCGCCGGATTTGCCCGTGAGCAGCGAGTCCCTACACACGCTGGCCGTC
TTTGGCTCCATCATCATCTCCCTGTCCGTGTTTATGCTGATCGTGGCTAG
CTTATGTTTCACCTACAAGCGACGCGAGAAGCTGCGCAAGCAGCCACGTC
TCATCAACTCAATGTGCAACTCACAGCTGTCGCCTTTGTCACAACTGGTG
GAACAGAGTTCGGGCTCCGGATCGGGATTACCATTGCTGGTGCAAAGAAC
CATTGCCAAGCAGATTCAGATGGTGCGACTGGTGGGCAAAGGACGATATG
GCGAGGTCTGGCTGGCCAAATGGCGCGATGAGCGGGTGGCCGTCAAGACC
TTCTTTACGACCGAAGAGGCTTCTTGGTTCCGCGAGACTGAAATCTATCA
GACAGTGCTGATGCGACACGACAATATCTTGGGCTTCATTGCCGCCGATA
TCAAGGGTAATGGTAGCTGGACACAGATGTTGCTGATCACCGACTACCAC
GAGATGGGCAGCCTACACGATTACCTCTCNATGTCGGTGATCAATCCGC

BO11092.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14026-PD 1530 tkv-RD 1..883 17..899 4396 99.8 Plus
CG14026-PC 1728 tkv-RC 230..1081 48..899 4241 99.8 Plus
CG14026-PB 1596 tkv-RB 98..949 48..899 4241 99.8 Plus
CG14026-PA 1692 tkv-RA 194..1045 48..899 4241 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 13:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
tkv-RD 3616 CG14026-RD 991..1876 14..899 4419 99.9 Plus
tkv-RA 2846 CG14026-RA 255..1106 48..899 4249 99.9 Plus
tkv-RB 3129 CG14026-RB 538..1389 48..899 4249 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 13:14:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5220740..5221401 899..238 3299 99.8 Minus
2L 23513712 2L 5221463..5221651 238..50 945 100 Minus
2R 25286936 2R 8959513..8959637 686..810 190 76.8 Plus
2L 23513712 2L 5236336..5236372 50..14 185 100 Minus
Blast to na_te.dros performed on 2015-02-02 13:14:10 has no hits.

BO11092.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:00 Download gff for BO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
tkv-PD 1..883 17..899 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:18:26 Download gff for BO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14026-PD 1..883 17..899 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:07:53 Download gff for BO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
tkv-RD 983..1876 3..899 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:47:03 Download gff for BO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
tkv-RD 983..1876 3..899 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:47:03 Download gff for BO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5220740..5221400 239..899 99 <- Minus
2L 5221463..5221650 51..238 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:07:53 Download gff for BO11092.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5220740..5221400 239..899 99 <- Minus
arm_2L 5221463..5221650 51..238 100 <- Minus

BO11092.complete Sequence

1561 bp (1561 high quality bases) assembled on 2006-03-24

GenBank Submission: FJ631996

> BO11092.complete
GAAGTTATCAGTCGACATGGCGCCGAAATCCAGAAAGAAGAAGGCTCATG
CCCGCTCCCTAACCTGCTACTGCGATGGCAGTTGTCCGGACAATGTAAGC
AATGGAACCTGCGAGACCAGACCCGGTGGCAGTTGCTTCAGCGCAGTCCA
ACAGCTTTACGATGAGACGACCGGGATGTACGAGGAGGAGCGTACATATG
GATGCATGCCTCCCGAAGACAACGGTGGTTTTCTCATGTGCAAGGTAGCC
GCTGTACCCCACCTGCATGGCAAGAACATTGTCTGCTGCGACAAGGAGGA
CTTCTGCAACCGTGACCTGTACCCCACCTACACACCCAAGCTGACCACAC
CAGCGCCGGATTTGCCCGTGAGCAGCGAGTCCCTACACACGCTGGCCGTC
TTTGGCTCCATCATCATCTCCCTGTCCGTGTTTATGCTGATCGTGGCTAG
CTTATGTTTCACCTACAAGCGACGCGAGAAGCTGCGCAAGCAGCCACGTC
TCATCAACTCAATGTGCAACTCACAGCTGTCGCCTTTGTCACAACTGGTG
GAACAGAGTTCGGGCTCCGGATCGGGATTACCATTGCTGGTGCAAAGAAC
CATTGCCAAGCAGATTCAGATGGTGCGACTGGTGGGCAAAGGACGATATG
GCGAGGTCTGGCTGGCCAAATGGCGCGATGAGCGGGTGGCCGTCAAGACC
TTCTTTACGACCGAAGAGGCTTCTTGGTTCCGCGAGACTGAAATCTATCA
GACAGTGCTGATGCGACACGACAATATCTTGGGCTTCATTGCCGCCGATA
TCAAGGGTAATGGTAGCTGGACACAGATGTTGCTGATCACCGACTACCAC
GAGATGGGCAGCCTACACGATTACCTCTCAATGTCGGTGATCAATCCGCA
GAAGCTGCAATTGCTGGCGTTTTCGCTGGCCTCCGGATTGGCCCACCTGC
ACGACGAGATTTTCGGAACCCCTGGCAAACCAGCTATCGCTCATCGCGAT
ATCAAGAGCAAGAACATTTTGGTCAAGCGGAATGGGCAGTGCGCTATTGC
TGACTTCGGGCTGGCAGTGAAGTACAACTCGGAACTGGATGTCATTCACA
TTGCACAGAATCCACGTGTCGGCACTCGACGCTACATGGCTCCAGAAGTA
TTGAGTCAGCAGCTGGATCCCAAGCAGTTTGAAGAGTTCAAACGGGCTGA
TATGTATTCAGTGGGTCTCGTTCTGTGGGAGATGACCCGTCGCTGCTACA
CACCCGTATCGGGCACCAAGACGACCACCTGCGAGGACTACGCCCTGCCC
TATCACGATGTGGTGCCCTCGGATCCCACGTTCGAGGACATGCACGCTGT
TGTGTGCGTAAAGGGTTTCCGGCCGCCGATACCATCACGCTGGCAGGAGG
ATGATGTACTCGCCACCGTATCCAAGATCATGCAGGAGTGCTGGCACCCG
AATCCCACCGTTCGGCTGACTGCCCTGCGCGTAAAGAAGACGCTGGGGCG
ACTGGAAACAGACTGTCTAATCGATGTGCCCATTAAGATTGTCGCAAGCT
TTCTAGACCAT

BO11092.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:38:22
Subject Length Description Subject Range Query Range Score Percent Strand
tkv-RD 1530 CG14026-PD 1..1527 17..1543 7635 100 Plus
tkv-RA 1692 CG14026-PA 194..1689 48..1543 7480 100 Plus
tkv-RB 1596 CG14026-PB 98..1593 48..1543 7480 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:38:23
Subject Length Description Subject Range Query Range Score Percent Strand
tkv-RD 3616 CG14026-RD 991..2520 14..1543 7650 100 Plus
tkv-RA 2846 CG14026-RA 255..1750 48..1543 7480 100 Plus
tkv-RB 3129 CG14026-RB 538..2033 48..1543 7480 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5220096..5221401 1543..238 6530 100 Minus
2L 23513712 2L 5221463..5221651 238..50 945 100 Minus
2R 25286936 2R 8959513..8959637 686..810 190 76.8 Plus
2L 23513712 2L 5236336..5236372 50..14 185 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:38:21 has no hits.

BO11092.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:51:33 Download gff for BO11092.complete
Subject Subject Range Query Range Percent Splice Strand
tkv-RD 1..1530 17..1547 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:01:21 Download gff for BO11092.complete
Subject Subject Range Query Range Percent Splice Strand
tkv-RD 990..2516 17..1545 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:45 Download gff for BO11092.complete
Subject Subject Range Query Range Percent Splice Strand
tkv-RD 994..2520 17..1545 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:51:33 Download gff for BO11092.complete
Subject Subject Range Query Range Percent Splice Strand
tkv-RD 979..2525 3..1554 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:04 Download gff for BO11092.complete
Subject Subject Range Query Range Percent Splice Strand
tkv-RD 994..2520 17..1545 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:04 Download gff for BO11092.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5220094..5221400 239..1545 99 <- Minus
2L 5221463..5221650 51..238 100 <- Minus
2L 5236336..5236369 17..50 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:45 Download gff for BO11092.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5220094..5221400 239..1545 99 <- Minus
arm_2L 5221463..5221650 51..238 100 <- Minus
arm_2L 5236336..5236369 17..50 100   Minus

BO11092.pep Sequence

Translation from 16 to 1561

> BO11092.pep
MAPKSRKKKAHARSLTCYCDGSCPDNVSNGTCETRPGGSCFSAVQQLYDE
TTGMYEEERTYGCMPPEDNGGFLMCKVAAVPHLHGKNIVCCDKEDFCNRD
LYPTYTPKLTTPAPDLPVSSESLHTLAVFGSIIISLSVFMLIVASLCFTY
KRREKLRKQPRLINSMCNSQLSPLSQLVEQSSGSGSGLPLLVQRTIAKQI
QMVRLVGKGRYGEVWLAKWRDERVAVKTFFTTEEASWFRETEIYQTVLMR
HDNILGFIAADIKGNGSWTQMLLITDYHEMGSLHDYLSMSVINPQKLQLL
AFSLASGLAHLHDEIFGTPGKPAIAHRDIKSKNILVKRNGQCAIADFGLA
VKYNSELDVIHIAQNPRVGTRRYMAPEVLSQQLDPKQFEEFKRADMYSVG
LVLWEMTRRCYTPVSGTKTTTCEDYALPYHDVVPSDPTFEDMHAVVCVKG
FRPPIPSRWQEDDVLATVSKIMQECWHPNPTVRLTALRVKKTLGRLETDC
LIDVPIKIVASFLDH

BO11092.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:27:00
Subject Length Description Subject Range Query Range Score Percent Strand
tkv-PD 509 CG14026-PD 1..509 1..509 2707 100 Plus
tkv-PA 563 CG14026-PA 61..563 7..509 2652 99.2 Plus
tkv-PB 531 CG14026-PB 29..531 7..509 2652 99.2 Plus
tkv-PC 575 CG14026-PC 73..575 7..509 2652 99.2 Plus
babo-PB 622 CG8224-PB 115..617 1..499 1046 43.5 Plus