Clone Sequence Records
BO11104.3prime Sequence
884 bp (814 high quality bases) assembled on 2006-04-19
> BO11104.3prime
ATGGTCTAGAAAGCTTGCGTTGTTGCGCTCCAGTCGCAGGCAAATGCTGC
TACCGGCGCCATTATCATCATCGTCATCCTCATCTCGCCCATCGGGCCCC
GTCGCATAGCAGCCATCCTCGCGCCACGCACACCCATGTGTCCAGGCCAT
CGGTTCCTGGAACTTGTCCTCGTGCAGCGGATTGAGGTAGGCATACAGGC
GGGGATGGTCCACGTACGCGGAGCACGCGTAGCACCACACAGACAGGTCA
GCCGTGCTCATCGCCAGCGGATGCTGCTCCTCCACTGAATGCTGCTCCAT
GTGGGCGTTCACATAGCGACCGCAGGCCACATGCCTGCAGCTCAGGCACA
CCCAGTTCTCCCCCGTCGATCCGCAAACGCTGCACTCCGCTCCGCTGTCT
AGTGATCGGGGCGCCTCCTCCGGACGTAGGAGCCTCAAGTGCGGACACGT
CTTGAGCGGATACACGGCGAACATCTCACTCTGCTCGAGGGCCTCCTTGT
TCTCCGCCAAGTAGTCGCTGAGCGTTTTTACCTTGACTTTGGGCTTGCTC
CCGCTGGGCCGCTCATCGCCGCAGTCGGGACGATCGCCGGCGAGTCCGCC
CGCCGCAGCCGTAGCATCGTCATTTGAGATATTCAAGTGTCGCAAGGAGG
CGGTAAGAAAATCCTCGTTGTTGTTCTCGCCCACAACGGGATCCCGCGGC
AGCCGCCGTCCGACGAACTCCAGCGAGCGCCAGTGGTTGCGCTGCACCTG
CAGGCACTGCTGCAGCGATTCCACACAGCTCTGGAAGGCCACCGTTGGTG
GCTTCTGCAGCGCCGTGGCTCCCAGCTGGGGCGTCGGCACGGGATCACCC
AGCAGCGTCTTGGTGCACATGGTCATCGCGTACG
BO11104.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6170-PA | 3387 | HDAC6-RA | 2519..3384 | 884..19 | 4330 | 100 | Minus |
CG6170-PC | 3417 | HDAC6-RC | 2549..3414 | 884..19 | 4330 | 100 | Minus |
CG6170-PB | 3408 | HDAC6-RB | 2540..3405 | 884..19 | 4330 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:46:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HDAC6-RE | 3817 | CG6170-RE | 2604..3469 | 884..19 | 4330 | 100 | Minus |
HDAC6-RG | 4483 | CG6170-RG | 3270..4135 | 884..19 | 4330 | 100 | Minus |
HDAC6-RB | 3848 | CG6170-RB | 2635..3500 | 884..19 | 4330 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:46:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15338313..15338705 | 884..492 | 1965 | 100 | Minus |
X | 23542271 | X | 15339627..15340012 | 404..19 | 1930 | 100 | Minus |
X | 23542271 | X | 15338835..15338924 | 494..405 | 450 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 02:46:42 has no hits.
BO11104.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:08 Download gff for
BO11104.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-PB | 2540..3408 | 16..884 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:18:38 Download gff for
BO11104.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6170-PB | 2540..3408 | 16..884 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 07:49:52 Download gff for
BO11104.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RB | 2635..3508 | 11..884 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 05:23:09 Download gff for
BO11104.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RB | 2635..3508 | 11..884 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 05:23:09 Download gff for
BO11104.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15338313..15338704 | 493..884 | 100 | -> | Minus |
X | 15338837..15338924 | 405..492 | 100 | -> | Minus |
X | 15339627..15340020 | 11..404 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 07:49:52 Download gff for
BO11104.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15232346..15232737 | 493..884 | 100 | -> | Minus |
arm_X | 15232870..15232957 | 405..492 | 100 | -> | Minus |
arm_X | 15233660..15234053 | 11..404 | 98 | | Minus |
BO11104.5prime Sequence
925 bp (832 high quality bases) assembled on 2006-04-19
> BO11104.5prime
GAAGTTATCAGTCGACATGAGCCCGCCCATCGTCACGCGACGGAGTGCGC
AGCAGGCAAAGATTCAGACACGGGCAATGGCCAGTAAATCGAAGACGGGC
ACGACAGGGGCGGCGACGGCGGCCGGCGGCACCGGCAGCAGCAGCGGCAG
TATCAGCGGCGGATTTAATGCCGCCGATCCGCGAAAGTCGAACAAACCGA
ACGCAGCGCTCTTGGAGGCGAAACGTCGAGCTCGGAACAACATGCTCAAG
AATCAGGGCTGCGGATCGCAGGAGAGCGTCACGGATATATTCCAGAATGC
TGTCAACAGCAAGAGTCTGGTGCGGAAACCAACGGCACTGATCTACGATG
AGTCCATGAGCCAGCACTGTTGCCTGTGGGACAAGGAGCACTACGAGTGT
CCCGAGCGCTTCACACGAGTCCTGGAACGCTGTCGCGAACTAAATCTGAC
GGAGCGCTGCCTGGAGTTGCCCTCGAGATCGGCGACCAAGGATGAAATTC
TGCGCCTGCACACAGAGGAGCACTTCGAGCGGCTGAAGGAGACGTCCGGG
ATTCGCGATGACGAGCGCATGGAGGAGCTGAGCTCCCGCTACGATTCAAT
TTACATTCATCCGTCCACATTCGAGCTCTCCCTGCTGGCCAGCGGCTCCA
CCATCGAATTGGTGGACCATCTGGTCGCCGGAAAGGCGCAGAATGGCATG
GCCATCATCCGGCCACCGGGTCACCATGCGATGAAGGCCGAGTACAACGG
TTATTGCTTCTTCAACAACGTGGCACTGGCCACCCAGCACGCCCTCGATG
TTCACAAGCTGCAGCGCATCCTGATCATCGACTACGATGTGCATCATGGG
CAGGGAACCCAGCGGTTCTTTCTACACGATCCCAGGGTGGTTTACTTCTC
CATCCATCGCTTCGAGCACGGAAGC
BO11104.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 14:16:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6170-PA | 3387 | HDAC6-RA | 1..854 | 17..870 | 4270 | 100 | Plus |
CG6170-PC | 3417 | HDAC6-RC | 33..884 | 19..870 | 4260 | 100 | Plus |
CG6170-PB | 3408 | HDAC6-RB | 24..875 | 19..870 | 4260 | 100 | Plus |
CG6170-PA | 3387 | HDAC6-RA | 860..909 | 876..925 | 250 | 100 | Plus |
CG6170-PC | 3417 | HDAC6-RC | 890..939 | 876..925 | 250 | 100 | Plus |
CG6170-PB | 3408 | HDAC6-RB | 881..930 | 876..925 | 250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:46:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HDAC6-RG | 4483 | CG6170-RG | 750..1660 | 15..925 | 4510 | 99.8 | Plus |
HDAC6-RA | 4483 | CG6170-RA | 750..1660 | 15..925 | 4510 | 99.8 | Plus |
HDAC6-RF | 3272 | CG6170-RF | 109..1015 | 19..925 | 4490 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:46:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15334989..15335269 | 19..299 | 1405 | 100 | Plus |
X | 23542271 | X | 15336289..15336562 | 613..886 | 1295 | 98.2 | Plus |
X | 23542271 | X | 15335545..15335729 | 429..613 | 925 | 100 | Plus |
X | 23542271 | X | 15335350..15335480 | 299..429 | 655 | 100 | Plus |
X | 23542271 | X | 15336612..15336654 | 883..925 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:46:11 has no hits.
BO11104.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 04:58:09 Download gff for
BO11104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-PA | 1..909 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:18:40 Download gff for
BO11104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6170-PA | 1..909 | 17..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:56:02 Download gff for
BO11104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RA | 745..1660 | 9..925 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:03:58 Download gff for
BO11104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RA | 745..1660 | 9..925 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:03:58 Download gff for
BO11104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15335350..15335480 | 299..429 | 100 | -> | Plus |
X | 15335546..15335729 | 430..613 | 100 | -> | Plus |
X | 15336290..15336561 | 614..885 | 99 | -> | Plus |
X | 15336615..15336654 | 886..925 | 100 | | Plus |
X | 15334984..15335268 | 12..298 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:56:02 Download gff for
BO11104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15229017..15229301 | 12..298 | 99 | -> | Plus |
arm_X | 15229383..15229513 | 299..429 | 100 | -> | Plus |
arm_X | 15229579..15229762 | 430..613 | 100 | -> | Plus |
arm_X | 15230323..15230594 | 614..885 | 99 | -> | Plus |
arm_X | 15230648..15230687 | 886..925 | 100 | | Plus |
BO11104.complete Sequence
3418 bp assembled on 2008-01-16
GenBank Submission: FJ631999
> BO11104.complete
GAAGTTATCAGTCGACATGAGCCCGCCCATCGTCACGCGACGGAGTGCGC
AGCAGGCAAAGATTCAGACACGGGCAATGGCCAGTAAATCGAAGACGGGC
ACGACAGGGGCGGCGACGGCGGCCGGCGGCACCGGCAGCAGCAGCGGCAG
TATCAGCGGCGGATTTAATGCCGCCGATCCGCGAAAGTCGAACAAACCGA
ACGCAGCGCTCTTGGAGGCGAAACGTCGAGCTCGGAACAACATGCTCAAG
AATCAGGGCTGCGGATCGCAGGAGAGCGTCACGGATATATTCCAGAATGC
TGTCAACAGCAAGAGTCTGGTGCGGAAACCAACGGCACTGATCTACGATG
AGTCCATGAGCCAGCACTGTTGCCTGTGGGACAAGGAGCACTACGAGTGT
CCCGAGCGCTTCACACGAGTCCTGGAACGCTGTCGCGAACTAAATCTGAC
GGAGCGCTGCCTGGAGTTGCCCTCGAGATCGGCGACCAAGGATGAAATTC
TGCGCCTGCACACAGAGGAGCACTTCGAGCGGCTGAAGGAGACGTCCGGG
ATTCGCGATGACGAGCGCATGGAGGAGCTGAGCTCCCGCTACGATTCAAT
TTACATTCATCCGTCCACATTCGAGCTCTCCCTGCTGGCCAGCGGCTCCA
CCATCGAATTGGTGGACCATCTGGTCGCCGGAAAGGCGCAGAATGGCATG
GCCATCATCCGGCCACCGGGTCACCATGCGATGAAGGCCGAGTACAACGG
TTATTGCTTCTTCAACAACGTGGCACTGGCCACCCAGCACGCCCTCGATG
TTCACAAGCTGCAGCGCATCCTGATCATCGACTACGATGTGCATCATGGG
CAGGGAACCCAGCGGTTCTTCTACAACGATCCCAGGGTGGTTTACTTCTC
CATCCATCGCTTCGAGCACGGAAGCTTCTGGCCGCATCTGCACGAGTCGG
ATTACCACGCCATTGGATCGGGAGCGGGCACGGGATACAACTTCAATGTG
CCGTTGAATGCGACGGGTATGACCAATGGCGATTACCTGGCCATTTTCCA
GCAGCTGCTGCTGCCGGTGGCCCTGGAATTCCAGCCGGAGCTGATCATCG
TTTCGGCTGGCTATGATGCGGCGCTGGGCTGTCCGGAGGGTGAGATGGAG
GTGACGCCGGCCTGCTATCCGCACCTGCTGAATCCGCTGCTGCGACTGGC
CGATGCCCGGGTGGCCGTCGTTCTGGAGGGCGGCTACTGCCTGGACTCGC
TGGCCGAGGGTGCGGCCCTAACCCTGCGCTCCCTGCTCGGCGATCCTTGT
CCGCCGCTGGTGGAGACAGTGCCACTGCCGCGTGCGGAACTCGCCCAGGC
CCTGCTCAGCTGCATTGCCGTGCACCGACCCCACTGGCGATGTCTGCAGC
TCCAGCAGACCTACGATTGCGTCGAATTGCAGGATCGGGATAAGGAAGAG
GATCTGCACACGGTACTGCGCCATTGGATTGGTGGACCACCGCCTATGGA
TCGTTACCCTACGCGCGATACGGCCATTCCGCTGCCGCCGGAAAAGCTGA
CCAGCAATGCCGCTCGTCTGCAGGTGCTGCGCGCGGAGACGAAGCTATCG
GTGCCGTCGTTTAAGGTGTGTTATGCCTACGATGCCCAAATGCTTCTGCA
CTGCAATCTCAATGATACGGGGCATCCGGAGCAGCCGTCGCGCATCCAGC
ACATCCACAAGATGCACGACGACTACGGTCTGCTGAAGCAGATGAAGCAA
CTGTCCCCCAGGGCGGCCACCACAGACGAGGTGTGCCTGGCCCACACTCG
CGCCCATGTGAATACAGTGCGTCGATTGCTGGGCCGCGAGCCGAAGGAAC
TGCATGACGCTGCTGGGATCTACAACTCGGTGTATCTGCATCCGCGCACC
TTCGATTGCGCCACCCTGGCCGCCGGTTTAGTGCTGCAGGCGGTGGACAG
TGTGCTGCGTGGCGAGTCCCGCAGCGGCATCTGCAACGTCCGTCCGCCGG
GCCATCATGCCGAGCAGGATCATCCGCACGGCTTCTGCATTTTCAACAAT
GTGGCCATTGCGGCGCAGTATGCCATTCGGGATTTCGGTCTGGAGCGTGT
GCTGATCGTCGACTGGGACGTCCATCACGGCAATGGGACGCAGCACATTT
TCGAGTCCAATCCCAAGGTGCTCTACATCAGCTTACATCGCTACGAGCAC
GGCTCCTTCTTCCCGAAGGGACCCGATGGCAATTTCGATGTGGTGGGCAA
GGGAGCCGGCAGGGGCTTCAATGTGAACATACCCTGGAACAAGAAGGGCA
TGGGTGACCTGGAGTACGCACTGGCCTTCCAGCAGCTGATCATGCCCATT
GCGTACGAGTTCAATCCGCAGCTGGTGTTGGTATCCGCCGGATTCGATGC
TGCCATCGGCGATCCCTTGGGCGGATGCAAGGTGACGGCCGAGGGCTACG
GCATGCTCACCCACTGGCTGTCGGCTTTGGCCAGCGGCCGGATAATCGTT
TGCCTGGAAGGTGGCTACAATGTGAACTCCATTTCGTACGCGATGACCAT
GTGCACCAAGACGCTGCTGGGTGATCCCGTGCCGACGCCCCAGCTGGGAG
CCACGGCGCTGCAGAAGCCACCAACGGTGGCCTTCCAGAGCTGTGTGGAA
TCGCTGCAGCAGTGCCTGCAGGTGCAGCGCAACCACTGGCGCTCGCTGGA
GTTCGTCGGACGGCGGCTGCCGCGGGATCCCGTTGTGGGCGAGAACAACA
ACGAGGATTTTCTTACCGCCTCCTTGCGACACTTGAATATCTCAAATGAC
GATGCTACGGCTGCGGCGGGCGGACTCGCCGGCGATCGTCCCGACTGCGG
CGATGAGCGGCCCAGCGGGAGCAAGCCCAAAGTCAAGGTAAAAACGCTCA
GCGACTACTTGGCGGAGAACAAGGAGGCCCTCGAGCAGAGTGAGATGTTC
GCCGTGTATCCGCTCAAGACGTGTCCGCACTTGAGGCTCCTACGTCCGGA
GGAGGCGCCCCGATCACTAGACAGCGGAGCGGAGTGCAGCGTTTGCGGAT
CGACGGGGGAGAACTGGGTGTGCCTGAGCTGCAGGCATGTGGCCTGCGGT
CGCTATGTGAACGCCCACATGGAGCAGCATTCAGTGGAGGAGCAGCATCC
GCTGGCGATGAGCACGGCTGACCTGTCTGTGTGGTGCTACGCGTGCTCCG
CGTACGTGGACCATCCCCGCCTGTATGCCTACCTCAATCCGCTGCACGAG
GACAAGTTCCAGGAACCGATGGCCTGGACACATGGGTGTGCGTGGCGCGA
GGATGGCTGCTATGCGACGGGGCCCGATGGGCGAGATGAGGATGACGATG
ATGATAATGGCGCCGGTAGCAGCATTTGCCTGCGACTGGAGCGCAACAAC
GCAAGCTTTCTAGACCAT
BO11104.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:30:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HDAC6-RG | 3540 | CG6170-PG | 1..3384 | 17..3400 | 16920 | 100 | Plus |
HDAC6-RA | 3387 | CG6170-PA | 1..3384 | 17..3400 | 16920 | 100 | Plus |
HDAC6-RB | 3408 | CG6170-PB | 24..3405 | 19..3400 | 16910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HDAC6-RG | 4483 | CG6170-RG | 750..4135 | 15..3400 | 16930 | 100 | Plus |
HDAC6-RA | 4483 | CG6170-RA | 750..4135 | 15..3400 | 16930 | 100 | Plus |
HDAC6-RE | 3817 | CG6170-RE | 88..3469 | 19..3400 | 16910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15336612..15338022 | 883..2293 | 7055 | 100 | Plus |
X | 23542271 | X | 15338070..15338705 | 2292..2927 | 3180 | 100 | Plus |
X | 23542271 | X | 15339627..15340012 | 3015..3400 | 1930 | 100 | Plus |
X | 23542271 | X | 15334989..15335269 | 19..299 | 1405 | 100 | Plus |
X | 23542271 | X | 15336289..15336562 | 613..886 | 1370 | 100 | Plus |
X | 23542271 | X | 15335545..15335729 | 429..613 | 925 | 100 | Plus |
X | 23542271 | X | 15335350..15335480 | 299..429 | 655 | 100 | Plus |
X | 23542271 | X | 15338835..15338924 | 2925..3014 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:30:50 has no hits.
BO11104.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:29 Download gff for
BO11104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RA | 1..3387 | 17..3403 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:34:05 Download gff for
BO11104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RA | 1107..4490 | 17..3402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:08:36 Download gff for
BO11104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RA | 752..4135 | 17..3402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:29 Download gff for
BO11104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RA | 1100..4498 | 9..3408 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:48 Download gff for
BO11104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HDAC6-RA | 752..4135 | 17..3402 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:48 Download gff for
BO11104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15334988..15335268 | 17..298 | 99 | -> | Plus |
X | 15335350..15335480 | 299..429 | 100 | -> | Plus |
X | 15335546..15335729 | 430..613 | 100 | -> | Plus |
X | 15336290..15336561 | 614..885 | 100 | -> | Plus |
X | 15336615..15338022 | 886..2293 | 100 | -> | Plus |
X | 15338072..15338704 | 2294..2926 | 100 | -> | Plus |
X | 15338837..15338924 | 2927..3014 | 100 | -> | Plus |
X | 15339627..15340012 | 3015..3402 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:08:36 Download gff for
BO11104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15229021..15229301 | 17..298 | 99 | -> | Plus |
arm_X | 15229383..15229513 | 299..429 | 100 | -> | Plus |
arm_X | 15229579..15229762 | 430..613 | 100 | -> | Plus |
arm_X | 15230323..15230594 | 614..885 | 100 | -> | Plus |
arm_X | 15230648..15232055 | 886..2293 | 100 | -> | Plus |
arm_X | 15232105..15232737 | 2294..2926 | 100 | -> | Plus |
arm_X | 15232870..15232957 | 2927..3014 | 100 | -> | Plus |
arm_X | 15233660..15234045 | 3015..3402 | 99 | | Plus |
BO11104.pep Sequence
Translation from 16 to 3418
> BO11104.pep
MSPPIVTRRSAQQAKIQTRAMASKSKTGTTGAATAAGGTGSSSGSISGGF
NAADPRKSNKPNAALLEAKRRARNNMLKNQGCGSQESVTDIFQNAVNSKS
LVRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELNLTERCLE
LPSRSATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPS
TFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAMKAEYNGYCFFN
NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFE
HGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLP
VALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADARVA
VVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVETVPLPRAELAQALLSCI
AVHRPHWRCLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYPTR
DTAIPLPPEKLTSNAARLQVLRAETKLSVPSFKVCYAYDAQMLLHCNLND
TGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNT
VRRLLGREPKELHDAAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGE
SRSGICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDW
DVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRG
FNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDP
LGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTL
LGDPVPTPQLGATALQKPPTVAFQSCVESLQQCLQVQRNHWRSLEFVGRR
LPRDPVVGENNNEDFLTASLRHLNISNDDATAAAGGLAGDRPDCGDERPS
GSKPKVKVKTLSDYLAENKEALEQSEMFAVYPLKTCPHLRLLRPEEAPRS
LDSGAECSVCGSTGENWVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMST
ADLSVWCYACSAYVDHPRLYAYLNPLHEDKFQEPMAWTHGCAWREDGCYA
TGPDGRDEDDDDDNGAGSSICLRLERNNASFLDH
BO11104.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:17:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HDAC6-PG | 1179 | CG6170-PG | 1..1128 | 1..1128 | 6054 | 100 | Plus |
HDAC6-PA | 1128 | CG6170-PA | 1..1128 | 1..1128 | 6054 | 100 | Plus |
HDAC6-PB | 1135 | CG6170-PB | 9..1135 | 2..1128 | 6049 | 100 | Plus |
HDAC6-PC | 1138 | CG6170-PC | 12..1138 | 2..1128 | 6049 | 100 | Plus |
HDAC6-PE | 1108 | CG6170-PE | 1..1108 | 21..1128 | 5958 | 100 | Plus |